RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 RMND5BQ96G75 393 aaPredicted RBP8.74□□□□□ -1.01
CHD8-201ENST00000399982 ADGBQ8N7X0 1667 aa8.74□□□□□ -1.01
CHD8-201ENST00000399982 ADGRA2Q96PE1 1338 aa8.74□□□□□ -1.01
CHD8-201ENST00000399982 ATP9AO75110 1047 aa8.74□□□□□ -1.01
CHD8-201ENST00000399982 ALDH1A2O94788 518 aa8.74□□□□□ -1.01
CHD8-201ENST00000399982 SRGNP10124 158 aa8.74□□□□□ -1.01
CHD8-201ENST00000399982 NCKAP1LP55160 1127 aa8.74□□□□□ -1.01
CHD8-201ENST00000399982 ROR1Q01973 937 aa8.74□□□□□ -1.01
CHD8-201ENST00000399982 PTPN12Q05209 780 aaKnown RBP8.74□□□□□ -1.01
CHD8-201ENST00000399982 AP3B2Q13367 1082 aa8.74□□□□□ -1.01
CHD8-201ENST00000399982 NAA30Q147X3 362 aaPredicted RBP8.74□□□□□ -1.01
CHD8-201ENST00000399982 MIIPQ5JXC2 388 aa8.74□□□□□ -1.01
CHD8-201ENST00000399982 SLC10A5Q5PT55 438 aa8.74□□□□□ -1.01
CHD8-201ENST00000399982 TTC39BQ5VTQ0 682 aaPredicted RBP8.74□□□□□ -1.01
CHD8-201ENST00000399982 MPP4Q96JB8 637 aa8.74□□□□□ -1.01
CHD8-201ENST00000399982 FBXO28Q9NVF7 368 aa8.74□□□□□ -1.01
CHD8-201ENST00000399982 COQ6Q9Y2Z9 468 aa8.74□□□□□ -1.01
CHD8-201ENST00000399982 NPEPPSP55786 919 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 TUBA1BP68363 451 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 P3H1Q32P28 736 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 TMEM63BQ5T3F8 832 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 RSBN1Q5VWQ0 802 aaPredicted RBP8.73□□□□□ -1.01
CHD8-201ENST00000399982 PAPD7Q5XG87 772 aaKnown RBP8.73□□□□□ -1.01
CHD8-201ENST00000399982 TUBA1AQ71U36 451 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 RPF1Q9H9Y2 349 aaKnown RBP8.73□□□□□ -1.01
CHD8-201ENST00000399982 EURLQ9NYK6 297 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 DAPK2Q9UIK4 370 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 SETD1BQ9UPS6 1966 aaKnown RBP8.73□□□□□ -1.01
CHD8-201ENST00000399982 AATKQ6ZMQ8 1374 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 RTN2O75298 545 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 TNFAIP2Q03169 654 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 TTC23Q5W5X9 447 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 KIAA0825Q8IV33 1275 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 SNX31Q8N9S9 440 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 RASSF5Q8WWW0 418 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 TRPC4Q9UBN4 977 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 MYRFQ9Y2G1 1151 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 R3HDM2Q9Y2K5 976 aaKnown RBP8.73□□□□□ -1.01
CHD8-201ENST00000399982 SKAP2O75563 359 aaPredicted RBP8.73□□□□□ -1.01
CHD8-201ENST00000399982 PLA2G4BP0C869 781 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 RAD23AP54725 363 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 EFHC1Q5JVL4 640 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 ARMC4Q5T2S8 1044 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 PRPF39Q86UA1 669 aaKnown RBP8.73□□□□□ -1.01
CHD8-201ENST00000399982 FUKQ8N0W3 1084 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 CMTR1Q8N1G2 835 aaKnown RBP8.73□□□□□ -1.01
CHD8-201ENST00000399982 OR6B3Q8NGW1 331 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 ZKSCAN4Q969J2 545 aaPredicted RBP8.73□□□□□ -1.01
CHD8-201ENST00000399982 RBM15Q96T37 977 aaKnown RBP eCLIP8.73□□□□□ -1.015e-7■■■■□ 25.4
CHD8-201ENST00000399982 AP3M1Q9Y2T2 418 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 ZNF518AQ6AHZ1 1483 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 WDR7Q9Y4E6 1490 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 NCOA3Q9Y6Q9 1424 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 POTECB2RU33 542 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 TLR2O60603 784 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 ZNF200P98182 395 aaPredicted RBP8.73□□□□□ -1.01
CHD8-201ENST00000399982 CYP4A11Q02928 519 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 XRCC4Q13426 336 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 CAMK1Q14012 370 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 KIZQ2M2Z5 673 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 ERAP2Q6P179 960 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 GSPT2Q8IYD1 628 aaKnown RBP8.73□□□□□ -1.01
CHD8-201ENST00000399982 IZUMO1Q8IYV9 350 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 URGCPQ8TCY9 931 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 MOV10Q9HCE1 1003 aaKnown RBP8.73□□□□□ -1.01
CHD8-201ENST00000399982 ERAP1Q9NZ08 941 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 WHRNQ9P202 907 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 ATP6V1HQ9UI12 483 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 WDR17Q8IZU2 1322 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 DFFAO00273 331 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 CCDC166P0CW27 439 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 NR1H2P55055 460 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 RIPK1Q13546 671 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 LPIN1Q14693 890 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 LRRC14Q15048 493 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 NAB2Q15742 525 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 ALKBH2Q6NS38 261 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 KDELC2Q7Z4H8 507 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 PALB2Q86YC2 1186 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 MICALL2Q8IY33 904 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 ZNF398Q8TD17 642 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 LENG1Q96BZ8 264 aaPredicted RBP8.73□□□□□ -1.01
CHD8-201ENST00000399982 TMA16Q96EY4 203 aaKnown RBP8.73□□□□□ -1.01
CHD8-201ENST00000399982 WDR37Q9Y2I8 494 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 ESYT3A0FGR9 886 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 GUCY1B2O75343 617 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 COPB2P35606 906 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 TALDO1P37837 337 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 NME3Q13232 169 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 RUNDC3AQ59EK9 446 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 SH2D3CQ8N5H7 860 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 SETD9Q8NE22 299 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 MRPL48Q96GC5 212 aaKnown RBP8.73□□□□□ -1.01
CHD8-201ENST00000399982 ADI1Q9BV57 179 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 PRRG3Q9BZD7 231 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 ING3Q9NXR8 418 aa8.73□□□□□ -1.01
CHD8-201ENST00000399982 RARGP13631 454 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 RAP1GAPP47736 663 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 PRKAA2P54646 552 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 ZSWIM7Q19AV6 140 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms