RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 DOK6Q6PKX4 331 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 IPCEF1Q8WWN9 437 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 KLHL29Q96CT2 875 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 IL17RAQ96F46 866 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 CNOT8Q9UFF9 292 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 KLHL3Q9UH77 587 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 PACSIN2Q9UNF0 486 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 CLTCL1P53675 1640 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 IQCMA0A1B0GVH7 501 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 PLEKHA8P1O95397 391 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 VAMP7P51809 220 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 AMHR2Q16671 573 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 ALS2CLQ60I27 953 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 TBC1D1Q86TI0 1168 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 NEK9Q8TD19 979 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 FAR2Q96K12 515 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 BBS2Q9BXC9 721 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 KLHL31Q9H511 634 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 CERS4Q9HA82 394 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 PDZK1P1A8MUH7 402 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 YWHAZP63104 245 aaKnown RBP11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 MTSS1LQ765P7 747 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 KRT74Q7RTS7 529 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 AGR3Q8TD06 166 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 FBXO41Q8TF61 875 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 INPP5DQ92835 1189 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 DHTKD1Q96HY7 919 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 STK33Q9BYT3 514 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 RSPH9Q9H1X1 276 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 NUP62P37198 522 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 SLCO1A2P46721 670 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 TGFB2P61812 414 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 PTGISQ16647 500 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 TMEM154Q6P9G4 183 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 NECAB2Q7Z6G3 386 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 CDKL3Q8IVW4 592 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 ELMO2Q96JJ3 720 aa11.46□□□□□ -0.57
CACNA1C-216ENST00000399638 PXDNLA1KZ92 1463 aa11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 VIRMAQ69YN4 1812 aaKnown RBP11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 EEF2KO00418 725 aaKnown RBP11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 PGK2P07205 417 aa11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 THOP1P52888 689 aa11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 SNAP47Q5SQN1 464 aa11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 DDI2Q5TDH0 399 aa11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 SCARA3Q6AZY7 606 aa11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 CHST13Q8NET6 341 aa11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 PCMTD2Q9NV79 361 aa11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 ALKBH4Q9NXW9 302 aa11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 TBC1D3BA6NDS4 549 aa11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 IFRD1O00458 451 aaPredicted RBP11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 B3GAT3O94766 335 aa11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 YWHAQP27348 245 aa11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 QRICH1Q2TAL8 776 aa11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 WDR72Q3MJ13 1102 aa11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 TMEM47Q9BQJ4 181 aa11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 MTG1Q9BT17 334 aaPredicted RBP11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 FAM32AQ9Y421 112 aaKnown RBP11.46□□□□□ -0.58
CACNA1C-216ENST00000399638 TEX28O15482 410 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 H2AFXP16104 143 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 ERO1BQ86YB8 467 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 RASSF9O75901 435 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 EFTUD2Q15029 972 aaKnown RBP eCLIP11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 SLC25A24Q6NUK1 477 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 CCDC149Q6ZUS6 474 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 DGKHQ86XP1 1220 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 CYP4X1Q8N118 509 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 MAGED4Q96JG8 741 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 SERPINI1Q99574 410 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 ADNPQ9H2P0 1102 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 FAM49BQ9NUQ9 324 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 TDRKHQ9Y2W6 561 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 DPCR1Q3MIW9 517 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 GLRA4Q5JXX5 417 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 RBM41Q96IZ5 413 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 CLMNQ96JQ2 1002 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 CGRRF1Q99675 332 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 CNPPD1Q9BV87 410 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 MOV10L1Q9BXT6 1211 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 PRRG4Q9BZD6 226 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 REXO4Q9GZR2 422 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 KLHL25Q9H0H3 589 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 CPDO75976 1380 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 LMTK2Q8IWU2 1503 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 AK9Q5TCS8 1911 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 POTEMA6NI47 508 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 NCAM1P13591 858 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 KCNH2Q12809 1159 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 CEP55Q53EZ4 464 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 MIB1Q86YT6 1006 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 CRAMP1Q96RY5 1269 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 FUCA2Q9BTY2 467 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 DIABLOQ9NR28 239 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 UTP6Q9NYH9 597 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 SNX5Q9Y5X3 404 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 HBP1O60381 514 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 NMT2O60551 498 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 RGS4P49798 205 aa11.45□□□□□ -0.58
CACNA1C-216ENST00000399638 CDH6P55285 790 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms