RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 GTPBP10A4D1E9 387 aaKnown RBP18.94■□□□□ 0.62
CTNS-203ENST00000399306 CSPG5O95196 566 aa18.94■□□□□ 0.62
CTNS-203ENST00000399306 AFPP02771 609 aaKnown RBP18.94■□□□□ 0.62
CTNS-203ENST00000399306 PCSK1P29120 753 aa18.94■□□□□ 0.62
CTNS-203ENST00000399306 MYL7Q01449 175 aa18.94■□□□□ 0.62
CTNS-203ENST00000399306 CCDC85BQ15834 202 aaPredicted RBP18.94■□□□□ 0.62
CTNS-203ENST00000399306 UVSSAQ2YD98 709 aa18.94■□□□□ 0.62
CTNS-203ENST00000399306 ZSCAN23Q3MJ62 389 aa18.94■□□□□ 0.62
CTNS-203ENST00000399306 CBWD6Q4V339 395 aa18.94■□□□□ 0.62
CTNS-203ENST00000399306 CBWD3Q5JTY5 395 aa18.94■□□□□ 0.62
CTNS-203ENST00000399306 CBWD5Q5RIA9 395 aa18.94■□□□□ 0.62
CTNS-203ENST00000399306 CDKAL1Q5VV42 579 aa18.94■□□□□ 0.62
CTNS-203ENST00000399306 ADGRF2Q8IZF7 708 aa18.94■□□□□ 0.62
CTNS-203ENST00000399306 TTC39CQ8N584 583 aa18.94■□□□□ 0.62
CTNS-203ENST00000399306 CYP3A43Q9HB55 503 aa18.94■□□□□ 0.62
CTNS-203ENST00000399306 CLDND1Q9NY35 253 aa18.94■□□□□ 0.62
CTNS-203ENST00000399306 AFF4Q9UHB7 1163 aaKnown RBP18.94■□□□□ 0.62
CTNS-203ENST00000399306 FBXW11Q9UKB1 542 aa18.94■□□□□ 0.62
CTNS-203ENST00000399306 TIMM13Q9Y5L4 95 aaPredicted RBP18.94■□□□□ 0.62
CTNS-203ENST00000399306 PLXNA3P51805 1871 aa18.94■□□□□ 0.62
CTNS-203ENST00000399306 SYCE3A1L190 88 aa18.93■□□□□ 0.62
CTNS-203ENST00000399306 SMTNL1A8MU46 457 aa18.93■□□□□ 0.62
CTNS-203ENST00000399306 TGM5O43548 720 aa18.93■□□□□ 0.62
CTNS-203ENST00000399306 POU2F2P09086 479 aa18.93■□□□□ 0.62
CTNS-203ENST00000399306 RPL17P18621 184 aaKnown RBP18.93■□□□□ 0.62
CTNS-203ENST00000399306 HOXA9P31269 272 aa18.93■□□□□ 0.62
CTNS-203ENST00000399306 GTF2F1P35269 517 aaKnown RBP eCLIP18.93■□□□□ 0.62
CTNS-203ENST00000399306 LTBRP36941 435 aa18.93■□□□□ 0.62
CTNS-203ENST00000399306 NOP14P78316 857 aaKnown RBP18.93■□□□□ 0.62
CTNS-203ENST00000399306 ROR1Q01973 937 aa18.93■□□□□ 0.62
CTNS-203ENST00000399306 GPR17Q13304 367 aa18.93■□□□□ 0.62
CTNS-203ENST00000399306 MAN2A1Q16706 1144 aa18.93■□□□□ 0.62
CTNS-203ENST00000399306 ANO6Q4KMQ2 910 aa18.93■□□□□ 0.62
CTNS-203ENST00000399306 WDR44Q5JSH3 913 aa18.93■□□□□ 0.62
CTNS-203ENST00000399306 RSPO2Q6UXX9 243 aaPredicted RBP18.93■□□□□ 0.62
CTNS-203ENST00000399306 CMASQ8NFW8 434 aaPredicted RBP18.93■□□□□ 0.62
CTNS-203ENST00000399306 C2orf15Q8WU43 125 aaKnown RBP18.93■□□□□ 0.62
CTNS-203ENST00000399306 IGFLR1Q9H665 355 aa18.93■□□□□ 0.62
CTNS-203ENST00000399306 ATF2P15336 505 aa18.92■□□□□ 0.62
CTNS-203ENST00000399306 MTIF2P46199 727 aaKnown RBP18.92■□□□□ 0.62
CTNS-203ENST00000399306 SKIV2LQ15477 1246 aaKnown RBP18.92■□□□□ 0.62
CTNS-203ENST00000399306 AAK1Q2M2I8 961 aa18.92■□□□□ 0.62
CTNS-203ENST00000399306 PUS10Q3MIT2 529 aaKnown RBP18.92■□□□□ 0.62
CTNS-203ENST00000399306 TCP11X2Q5H9J9 407 aa18.92■□□□□ 0.62
CTNS-203ENST00000399306 ANKRD54Q6NXT1 300 aa18.92■□□□□ 0.62
CTNS-203ENST00000399306 DCP1BQ8IZD4 617 aaKnown RBP18.92■□□□□ 0.62
CTNS-203ENST00000399306 VN1R2Q8NFZ6 395 aa18.92■□□□□ 0.62
CTNS-203ENST00000399306 KBTBD7Q8WVZ9 684 aa18.92■□□□□ 0.62
CTNS-203ENST00000399306 PPM1EQ8WY54 764 aa18.92■□□□□ 0.62
CTNS-203ENST00000399306 MSLNLQ96KJ4 702 aa18.92■□□□□ 0.62
CTNS-203ENST00000399306 MMS19Q96T76 1030 aa18.92■□□□□ 0.62
CTNS-203ENST00000399306 RTP3Q9BQQ7 232 aa18.92■□□□□ 0.62
CTNS-203ENST00000399306 BCO2Q9BYV7 579 aa18.92■□□□□ 0.62
CTNS-203ENST00000399306 NIF3L1Q9GZT8 377 aa18.92■□□□□ 0.62
CTNS-203ENST00000399306 ZCWPW1Q9H0M4 648 aa18.92■□□□□ 0.62
CTNS-203ENST00000399306 SFXN1Q9H9B4 322 aa18.92■□□□□ 0.62
CTNS-203ENST00000399306 ZDHHC7Q9NXF8 308 aa18.92■□□□□ 0.62
CTNS-203ENST00000399306 CLEC1BQ9P126 229 aa18.92■□□□□ 0.62
CTNS-203ENST00000399306 PRUNE2Q8WUY3 3088 aa18.92■□□□□ 0.62
CTNS-203ENST00000399306 EYSQ5T1H1 3165 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 SPTBN5Q9NRC6 3674 aaKnown RBP18.91■□□□□ 0.62
CTNS-203ENST00000399306 WDR27A2RRH5 827 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 KCNJ18B7U540 433 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 ADAM12O43184 909 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 TBX10O75333 385 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 EPCAMP16422 314 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 ZNF165P49910 485 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 TSPY1Q01534 308 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 ITIH3Q06033 890 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 KCNJ12Q14500 433 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 NCAPHQ15003 741 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 MAPRE1Q15691 268 aaKnown RBP18.91■□□□□ 0.62
CTNS-203ENST00000399306 LEXMQ3ZCV2 418 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 CCDC149Q6ZUS6 474 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 UNC93AQ86WB7 457 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 TCEAL8Q8IYN2 117 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 KREMEN2Q8NCW0 462 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 SEMA4DQ92854 862 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 TUBGCP2Q9BSJ2 902 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 DNAI2Q9GZS0 605 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 MMRN2Q9H8L6 949 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 SAMSN1Q9NSI8 373 aaKnown RBP18.91■□□□□ 0.62
CTNS-203ENST00000399306 DDX43Q9NXZ2 648 aaKnown RBP18.91■□□□□ 0.62
CTNS-203ENST00000399306 THEGQ9P2T0 379 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 NXF1Q9UBU9 619 aaKnown RBP18.91■□□□□ 0.62
CTNS-203ENST00000399306 CDH9Q9ULB4 789 aa18.91■□□□□ 0.62
CTNS-203ENST00000399306 LRRC10BA6NIK2 292 aa18.9■□□□□ 0.62
CTNS-203ENST00000399306 LINC01565O15544 149 aa18.9■□□□□ 0.62
CTNS-203ENST00000399306 HNRNPA1P09651 372 aaKnown RBP eCLIP18.9■□□□□ 0.62
CTNS-203ENST00000399306 CPB1P15086 417 aa18.9■□□□□ 0.62
CTNS-203ENST00000399306 ZNF18P17022 549 aa18.9■□□□□ 0.62
CTNS-203ENST00000399306 ASPAP45381 313 aa18.9■□□□□ 0.62
CTNS-203ENST00000399306 INCA1Q0VD86 236 aa18.9■□□□□ 0.62
CTNS-203ENST00000399306 NFE2Q16621 373 aaPredicted RBP18.9■□□□□ 0.62
CTNS-203ENST00000399306 PALB2Q86YC2 1186 aa18.9■□□□□ 0.62
CTNS-203ENST00000399306 ANKRD20A12PQ8NF67 263 aa18.9■□□□□ 0.62
CTNS-203ENST00000399306 OR10T2Q8NGX3 314 aa18.9■□□□□ 0.62
CTNS-203ENST00000399306 ATXN2LQ8WWM7 1075 aaKnown RBP18.9■□□□□ 0.62
CTNS-203ENST00000399306 FAM81BQ96LP2 452 aa18.9■□□□□ 0.62
CTNS-203ENST00000399306 SNX25Q9H3E2 840 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms