RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 ZBTB41Q5SVQ8 909 aa12.78□□□□□ -0.36
SMIM11A-201ENST00000399292 AXDND1Q5T1B0 1012 aaPredicted RBP12.78□□□□□ -0.36
SMIM11A-201ENST00000399292 SHC4Q6S5L8 630 aa12.78□□□□□ -0.36
SMIM11A-201ENST00000399292 CCDC65Q8IXS2 484 aa12.78□□□□□ -0.36
SMIM11A-201ENST00000399292 APPL2Q8NEU8 664 aa12.78□□□□□ -0.36
SMIM11A-201ENST00000399292 POMGNT1Q8WZA1 660 aa12.78□□□□□ -0.36
SMIM11A-201ENST00000399292 STAMQ92783 540 aa12.78□□□□□ -0.36
SMIM11A-201ENST00000399292 DHX58Q96C10 678 aa12.78□□□□□ -0.36
SMIM11A-201ENST00000399292 ZNF707Q96C28 371 aaPredicted RBP12.78□□□□□ -0.36
SMIM11A-201ENST00000399292 ACCSQ96QU6 501 aa12.78□□□□□ -0.36
SMIM11A-201ENST00000399292 TNMDQ9H2S6 317 aa12.78□□□□□ -0.36
SMIM11A-201ENST00000399292 WDR6Q9NNW5 1121 aaKnown RBP12.78□□□□□ -0.36
SMIM11A-201ENST00000399292 KBTBD4Q9NVX7 518 aa12.78□□□□□ -0.36
SMIM11A-201ENST00000399292 TUBGCP4Q9UGJ1 667 aa12.78□□□□□ -0.36
SMIM11A-201ENST00000399292 FBXW11Q9UKB1 542 aa12.78□□□□□ -0.36
SMIM11A-201ENST00000399292 RCOR1Q9UKL0 485 aa12.78□□□□□ -0.36
SMIM11A-201ENST00000399292 AGO2Q9UKV8 859 aaKnown RBP12.78□□□□□ -0.36
SMIM11A-201ENST00000399292 CDY1Q9Y6F8 540 aa12.78□□□□□ -0.36
SMIM11A-201ENST00000399292 STYXL1Q9Y6J8 313 aa12.78□□□□□ -0.36
SMIM11A-201ENST00000399292 WDFY4Q6ZS81 3184 aa12.77□□□□□ -0.36
SMIM11A-201ENST00000399292 FRMD3A2A2Y4 597 aa12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 TISP43B9A030 160 aa12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 H7C4K7 107 aa12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 LRPAP1P30533 357 aa12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 MCM4P33991 863 aa12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 ACOT2P49753 483 aa12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 RNF144AP50876 292 aaPredicted RBP12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 POU5F1Q01860 360 aaKnown RBP12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 DNM1Q05193 864 aaKnown RBP12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 KCNA1Q09470 495 aa12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 ALCAMQ13740 583 aa12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 UVSSAQ2YD98 709 aa12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 PPM1LQ5SGD2 360 aa12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 L1TD1Q5T7N2 865 aaKnown RBP12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 RSPO2Q6UXX9 243 aaPredicted RBP12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 RTL10Q7L3V2 364 aa12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 SYCP3Q8IZU3 236 aa12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 BEST2Q8NFU1 509 aa12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 SUSD3Q96L08 255 aa12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 ASB7Q9H672 318 aa12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 FAM13BQ9NYF5 915 aa12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 PCDHA7Q9UN72 937 aa12.77□□□□□ -0.37
SMIM11A-201ENST00000399292 TMEM221A6NGB7 291 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 M0R296 226 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 POLR2DO15514 142 aaKnown RBP12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 C8AP07357 584 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 HNRNPA1P09651 372 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 ADSSP30520 456 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 GSK3AP49840 483 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 CASP5P51878 434 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 SIGLEC14Q08ET2 396 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 MRPL58Q14197 206 aaKnown RBP12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 TMEM132DQ14C87 1099 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 SPATA1Q5VX52 437 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 ZNF385CQ66K41 422 aaPredicted RBP12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 JADE1Q6IE81 842 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 SLC8B1Q6J4K2 584 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 STXBP4Q6ZWJ1 553 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 UBALD2Q8IYN6 164 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 ZNF461Q8TAF7 563 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 MFSD14AQ96MC6 490 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 TRIM9Q9C026 710 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 IKZF4Q9H2S9 585 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 TMEM206Q9H813 350 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 SORCS3Q9UPU3 1222 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 DERAQ9Y315 318 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 HCN4Q9Y3Q4 1203 aa12.76□□□□□ -0.37
SMIM11A-201ENST00000399292 TBC1D4O60343 1298 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 CLUHO75153 1309 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 XYLBO75191 536 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 PRPF6O94906 941 aaKnown RBP12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 LDHAP00338 332 aaKnown RBP12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 ASGR2P07307 311 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 PAX3P23760 479 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 HOXA9P31269 272 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 GBP2P32456 591 aaPredicted RBP12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 ELF1P32519 619 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 ARPP19P56211 112 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 MTMR3Q13615 1198 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 CTXN3Q4LDR2 81 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 RESP18Q5W5W9 173 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 DSTYKQ6XUX3 929 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 HFE2Q6ZVN8 426 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 BMP8AQ7Z5Y6 402 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 GRASPQ7Z6J2 395 aaPredicted RBP12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 SLC7A14Q8TBB6 771 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 PBXIP1Q96AQ6 731 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 C7orf25Q9BPX7 421 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 PYM1Q9BRP8 204 aaKnown RBP12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 MAGEF1Q9HAY2 307 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 FBXL5Q9UKA1 691 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 POLIQ9UNA4 740 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 C2CD2Q9Y426 696 aa12.75□□□□□ -0.37
SMIM11A-201ENST00000399292 MYH11P35749 1972 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 M0QZQ0 153 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 CCL16O15467 120 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 ABLIM3O94929 683 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 IL18RAPO95256 599 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 NFICP08651 508 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms