RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 CASP10Q92851 521 aa11.21□□□□□ -0.61
CYCSP55-201ENST00000399027 HLA-CQ95604 372 aa11.21□□□□□ -0.61
CYCSP55-201ENST00000399027 MSLNLQ96KJ4 702 aa11.21□□□□□ -0.61
CYCSP55-201ENST00000399027 RTP3Q9BQQ7 232 aa11.21□□□□□ -0.61
CYCSP55-201ENST00000399027 UBE2ZQ9H832 354 aaPredicted RBP11.21□□□□□ -0.61
CYCSP55-201ENST00000399027 MMRN2Q9H8L6 949 aa11.21□□□□□ -0.61
CYCSP55-201ENST00000399027 RAB20Q9NX57 234 aa11.21□□□□□ -0.61
CYCSP55-201ENST00000399027 CLDND1Q9NY35 253 aa11.21□□□□□ -0.61
CYCSP55-201ENST00000399027 CLEC1BQ9P126 229 aa11.21□□□□□ -0.61
CYCSP55-201ENST00000399027 NFE2L3Q9Y4A8 694 aa11.21□□□□□ -0.61
CYCSP55-201ENST00000399027 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.21□□□□□ -0.61
CYCSP55-201ENST00000399027 PATJQ8NI35 1801 aa11.21□□□□□ -0.62
CYCSP55-201ENST00000399027 DENND4CQ5VZ89 1909 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 WDR27A2RRH5 827 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 TGM5O43548 720 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 AFPP02771 609 aaKnown RBP11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 EPCAMP16422 314 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 WARSP23381 471 aaKnown RBP11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 OR1D2P34982 312 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 LHX1P48742 406 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 TNNC1P63316 161 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 RBM10P98175 930 aaKnown RBP11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 MYL5Q02045 173 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 DLX2Q07687 328 aaPredicted RBP11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 KCNH2Q12809 1159 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 NCAPHQ15003 741 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 ANO6Q4KMQ2 910 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 ZNF667Q5HYK9 610 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 CDKAL1Q5VV42 579 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 TPGS2Q68CL5 300 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 ANKRD54Q6NXT1 300 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 RTL10Q7L3V2 364 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 GLYCTKQ8IVS8 523 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 ADGRF2Q8IZF7 708 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 THEM5Q8N1Q8 247 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 OR10T2Q8NGX3 314 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 SEMA4DQ92854 862 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 ACBD6Q9BR61 282 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 BCO2Q9BYV7 579 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 IMPG2Q9BZV3 1241 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 NAT10Q9H0A0 1025 aaKnown RBP11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 ZCWPW1Q9H0M4 648 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 PLEKHA4Q9H4M7 779 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 SAMSN1Q9NSI8 373 aaKnown RBP11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 DZANK1Q9NVP4 752 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 DPP7Q9UHL4 492 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 FBXW11Q9UKB1 542 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 MAFFQ9ULX9 164 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 XIRP2A4UGR9 3374 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 PRUNE2Q8WUY3 3088 aa11.2□□□□□ -0.62
CYCSP55-201ENST00000399027 OBSL1O75147 1896 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 LRRN2O75325 713 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 SLC34A2O95436 690 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 P4HA1P13674 534 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 PRKCSHP14314 528 aaPredicted RBP11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 ATF2P15336 505 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 HOXB8P17481 243 aaPredicted RBP11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 EEF1GP26641 437 aaKnown RBP11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 ASPAP45381 313 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 NOP14P78316 857 aaKnown RBP11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 MYL7Q01449 175 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 GPR17Q13304 367 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 SKIV2LQ15477 1246 aaKnown RBP11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 TCP11X2Q5H9J9 407 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 SPOPLQ6IQ16 392 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 LLGL2Q6P1M3 1020 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 OSTM1Q86WC4 334 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 PALB2Q86YC2 1186 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 CCDC150Q8NCX0 1101 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 LMO3Q8TAP4 145 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 TMEM209Q96SK2 561 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 MMS19Q96T76 1030 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 PKMYT1Q99640 499 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 PI4K2AQ9BTU6 479 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 HSD3B7Q9H2F3 369 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 FAM124BQ9H5Z6 455 aaPredicted RBP11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 APOBEC3GQ9HC16 384 aaKnown RBP11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 MAN1C1Q9NR34 630 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 DDX43Q9NXZ2 648 aaKnown RBP11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 THEGQ9P2T0 379 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 HSFX1Q9UBD0 423 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 MAGEC2Q9UBF1 373 aaPredicted RBP11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 BARX2Q9UMQ3 279 aaPredicted RBP11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 POLIQ9UNA4 740 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 NME7Q9Y5B8 376 aa11.19□□□□□ -0.62
CYCSP55-201ENST00000399027 NOTCH4Q99466 2003 aa11.18□□□□□ -0.62
CYCSP55-201ENST00000399027 MYH10P35580 1976 aa11.18□□□□□ -0.62
CYCSP55-201ENST00000399027 GTPBP10A4D1E9 387 aaKnown RBP11.18□□□□□ -0.62
CYCSP55-201ENST00000399027 KCNJ18B7U540 433 aa11.18□□□□□ -0.62
CYCSP55-201ENST00000399027 CPB1P15086 417 aa11.18□□□□□ -0.62
CYCSP55-201ENST00000399027 ZNF18P17022 549 aa11.18□□□□□ -0.62
CYCSP55-201ENST00000399027 HOXA9P31269 272 aa11.18□□□□□ -0.62
CYCSP55-201ENST00000399027 CETN1Q12798 172 aa11.18□□□□□ -0.62
CYCSP55-201ENST00000399027 SMARCB1Q12824 385 aa11.18□□□□□ -0.62
CYCSP55-201ENST00000399027 KCNJ12Q14500 433 aa11.18□□□□□ -0.62
CYCSP55-201ENST00000399027 MAN2A1Q16706 1144 aa11.18□□□□□ -0.62
CYCSP55-201ENST00000399027 UVSSAQ2YD98 709 aa11.18□□□□□ -0.62
CYCSP55-201ENST00000399027 LEXMQ3ZCV2 418 aa11.18□□□□□ -0.62
CYCSP55-201ENST00000399027 INTS6LQ5JSJ4 861 aaKnown RBP11.18□□□□□ -0.62
CYCSP55-201ENST00000399027 MIIPQ5JXC2 388 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms