RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 CDCA5Q96FF9 252 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 ZNF668Q96K58 619 aaPredicted RBP14.67□□□□□ -0.06
PRAME-202ENST00000398743 NEU2Q9Y3R4 380 aa14.67□□□□□ -0.06
PRAME-202ENST00000398743 LOC102724159A0A0B4J2E5 919 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 TCRBV5S1A1TA0A578 114 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 ASAP2O43150 1006 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 CHKAP35790 457 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 SLCO1A2P46721 670 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 MBTD1Q05BQ5 628 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 MOGSQ13724 837 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 PWP2Q15269 919 aaKnown RBP14.66□□□□□ -0.06
PRAME-202ENST00000398743 LRRC38Q5VT99 294 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 MFSD5Q6N075 450 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 ARMC9Q7Z3E5 817 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 ANKS1BQ7Z6G8 1248 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 CDR2LQ86X02 465 aaPredicted RBP14.66□□□□□ -0.06
PRAME-202ENST00000398743 CEP120Q8N960 986 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 BBOF1Q8ND07 529 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 MDM1Q8TC05 714 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 SELENOSQ9BQE4 189 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 KLHL11Q9NVR0 708 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 ERAP1Q9NZ08 941 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 RNF181Q9P0P0 153 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 ANAPC5Q9UJX4 755 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 GGA2Q9UJY4 613 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 TNFSF13BQ9Y275 285 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 IL18RAPO95256 599 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 ACSL3O95573 720 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 VPS41P49754 854 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 IFI35P80217 286 aaPredicted RBP14.66□□□□□ -0.06
PRAME-202ENST00000398743 LACTBP83111 547 aaPredicted RBP14.66□□□□□ -0.06
PRAME-202ENST00000398743 LMNB2Q03252 620 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 ZNF252P-AS1Q0IIN9 211 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 EEF1DP3Q658K8 133 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 TAOK1Q7L7X3 1001 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 ERICH1Q86X53 443 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 SLITRK1Q96PX8 696 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 FAM118BQ9BPY3 351 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 DDX23Q9BUQ8 820 aaKnown RBP14.66□□□□□ -0.06
PRAME-202ENST00000398743 CDT1Q9H211 546 aa14.66□□□□□ -0.06
PRAME-202ENST00000398743 RPF1Q9H9Y2 349 aaKnown RBP14.66□□□□□ -0.06
PRAME-202ENST00000398743 MEFVO15553 781 aaPredicted RBP14.65□□□□□ -0.06
PRAME-202ENST00000398743 TJP3O95049 919 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 KRT1P04264 644 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 KRT19P08727 400 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 CXCL8P10145 99 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 CHN1P15882 459 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 TCF4P15884 667 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 AUHQ13825 339 aaKnown RBP14.65□□□□□ -0.06
PRAME-202ENST00000398743 PIGHQ14442 188 aaPredicted RBP14.65□□□□□ -0.06
PRAME-202ENST00000398743 ATP13A4Q4VNC1 1196 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 TNFAIP8L3Q5GJ75 292 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 PPP1R15BQ5SWA1 713 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 TMEM63BQ5T3F8 832 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 ERMARDQ5T6L9 678 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 GSTA5Q7RTV2 222 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 YTHDF3Q7Z739 585 aaKnown RBP14.65□□□□□ -0.06
PRAME-202ENST00000398743 TADA2BQ86TJ2 420 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 WDTC1Q8N5D0 677 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 TFAP2BQ92481 460 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 ZBTB10Q96DT7 871 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 XPO6Q96QU8 1125 aaKnown RBP14.65□□□□□ -0.06
PRAME-202ENST00000398743 NFKBIZQ9BYH8 718 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 MINDY3Q9H8M7 445 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 PDGFCQ9NRA1 345 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 PRMT7Q9NVM4 692 aaPredicted RBP14.65□□□□□ -0.06
PRAME-202ENST00000398743 NXF1Q9UBU9 619 aaKnown RBP14.65□□□□□ -0.06
PRAME-202ENST00000398743 STRIP2Q9ULQ0 834 aa14.65□□□□□ -0.06
PRAME-202ENST00000398743 ASB14A6NK59 587 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 F8VP50 259 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 PI4K2BG5E9Z4 385 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 C22orf31O95567 290 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 TTC4O95801 387 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 ATF7P17544 494 aaPredicted RBP14.64□□□□□ -0.07
PRAME-202ENST00000398743 KAZNQ674X7 775 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 ADAM7Q9H2U9 754 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 IVNS1ABPQ9Y6Y0 642 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 MED7O43513 233 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 LIASO43766 372 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 KRT10P13645 584 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 POLR2BP30876 1174 aaKnown RBP14.64□□□□□ -0.07
PRAME-202ENST00000398743 PHKA2P46019 1235 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 COPS2P61201 443 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 IGBP1P78318 339 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 OGDHQ02218 1023 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 LONRF1Q17RB8 773 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 ZNF667Q5HYK9 610 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 CYP4A22Q5TCH4 519 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 IZUMO3Q5VZ72 239 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 MFSD7Q6UXD7 560 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 TMEM192Q8IY95 271 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 NIPA2Q8N8Q9 360 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 CCHCR1Q8TD31 782 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 SERPINB12Q96P63 405 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 RNPEPQ9H4A4 650 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 DDX56Q9NY93 547 aaKnown RBP14.64□□□□□ -0.07
PRAME-202ENST00000398743 POLIQ9UNA4 740 aa14.64□□□□□ -0.07
PRAME-202ENST00000398743 C5orf60A6NFR6 353 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 IQCF3P0C7M6 154 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 CD19P15391 556 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms