RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 TTC26A0AVF1 554 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 FGFR4P22455 802 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 HARS2P49590 506 aaKnown RBP14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 ALDH5A1P51649 535 aaPredicted RBP14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 GLRA4Q5JXX5 417 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 RNF168Q8IYW5 571 aaPredicted RBP14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 SLC25A41Q8N5S1 370 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 NAGPAQ9UK23 515 aa14.94□□□□□ -0.02
PCDHA11-201ENST00000398640 GOLGA8RI6L899 631 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 ZNF197O14709 1029 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 ZNF185O15231 689 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 SCP2P22307 547 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 PTGISQ16647 500 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 C11orf96Q7Z7L8 435 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 ZFPM1Q8IX07 1006 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 SLC7A14Q8TBB6 771 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 NAF1Q96HR8 494 aaKnown RBP14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 MS4A14Q96JA4 679 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 DACH2Q96NX9 599 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 GTPBP10A4D1E9 387 aaKnown RBP14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 TRIM48Q8IWZ4 208 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 ASAP3Q8TDY4 903 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 TGS1Q96RS0 853 aaKnown RBP14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 HPS4Q9NQG7 708 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 TLR2O60603 784 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 TOMM70O94826 608 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 ATP1A1P05023 1023 aaKnown RBP14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 IGFBP4P22692 258 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 SLC26A2P50443 739 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 IQSEC1Q6DN90 963 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 ATP11CQ8NB49 1132 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 FOPNLQ96NB1 174 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 IGFLR1Q9H665 355 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 CAPN10Q9HC96 672 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 GFAPP14136 432 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 ZFXP17010 805 aaPredicted RBP14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 CYP2C19P33261 490 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 FLOT2Q14254 428 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 SPDYAQ5MJ70 313 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 HASPINQ8TF76 798 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 ASPSCR1Q9BZE9 553 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 MRC1P22897 1456 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 RNF103-CHMP3A0A140T963 221 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 BRAFP15056 766 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 ANTXR2P58335 489 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 DAB2P98082 770 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 KIZQ2M2Z5 673 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 METTL7BQ6UX53 244 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 TRIM72Q6ZMU5 477 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 RRM2BQ7LG56 351 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 ANKRD23Q86SG2 305 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 TMCO5AQ8N6Q1 288 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 UBA3Q8TBC4 463 aa14.93□□□□□ -0.02
PCDHA11-201ENST00000398640 BCL9LQ86UU0 1499 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 NFAT5O94916 1531 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 MAP2K5Q13163 448 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 LRRC8EQ6NSJ5 796 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 ENOSF1Q7L5Y1 443 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 ACTR5Q9H9F9 607 aaPredicted RBP14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 CHD2O14647 1828 aaKnown RBP14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 ABCC6O95255 1503 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 H0Y626 953 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 TDRD10Q5VZ19 366 aaKnown RBP14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 RIOX2Q8IUF8 465 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 SYTL5Q8TDW5 730 aaPredicted RBP14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 CHCHD3Q9NX63 227 aaKnown RBP14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 PITPNM2Q9BZ72 1349 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 XRN1Q8IZH2 1706 aaKnown RBP14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 TBC1D12O60347 775 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 ERFP50548 548 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 NCOA4Q13772 614 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 MTF1Q14872 753 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 LY6KQ17RY6 165 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 CATSPER3Q86XQ3 398 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 FAM118BQ9BPY3 351 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 SLC25A13Q9UJS0 675 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 PCDHGB4Q9UN71 923 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 PIK3C2AO00443 1686 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 URODP06132 367 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 PDAP1Q13442 181 aaKnown RBP14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 GPR142Q7Z601 462 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 CERS5Q8N5B7 392 aa14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.92□□□□□ -0.02
PCDHA11-201ENST00000398640 CYP4A22Q5TCH4 519 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 C18orf8Q96DM3 657 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 GAKO14976 1311 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 EEF2KO00418 725 aaKnown RBP14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 HAUS5O94927 633 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 ZBTB48P10074 688 aaPredicted RBP14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 GOLGA7BQ2TAP0 167 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 ABHD8Q96I13 439 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 MCEEQ96PE7 176 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 RUBCNLQ9H714 662 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 GGT7Q9UJ14 662 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 BPIFA3Q9BQP9 254 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 DPP7Q9UHL4 492 aa14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 MEFVO15553 781 aaPredicted RBP14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 LMNAP02545 664 aaKnown RBP14.91□□□□□ -0.02
PCDHA11-201ENST00000398640 WEE1P30291 646 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms