RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 ANO9A1A5B4 782 aa27.37■■□□□ 1.97
U2AF1-203ENST00000398137 FGFR3P22607 806 aa27.37■■□□□ 1.97
U2AF1-203ENST00000398137 CLDN10P78369 228 aa27.37■■□□□ 1.97
U2AF1-203ENST00000398137 IER5LQ5T953 404 aa27.37■■□□□ 1.97
U2AF1-203ENST00000398137 SCARA3Q6AZY7 606 aa27.37■■□□□ 1.97
U2AF1-203ENST00000398137 CEP57Q86XR8 500 aa27.37■■□□□ 1.97
U2AF1-203ENST00000398137 PLEKHA4Q9H4M7 779 aa27.37■■□□□ 1.97
U2AF1-203ENST00000398137 MMRN2Q9H8L6 949 aa27.37■■□□□ 1.97
U2AF1-203ENST00000398137 WDR6Q9NNW5 1121 aaKnown RBP27.37■■□□□ 1.97
U2AF1-203ENST00000398137 SIX4Q9UIU6 781 aa27.37■■□□□ 1.97
U2AF1-203ENST00000398137 I3L4J1 428 aa27.36■■□□□ 1.97
U2AF1-203ENST00000398137 KRT19P08727 400 aa27.36■■□□□ 1.97
U2AF1-203ENST00000398137 BIRC3Q13489 604 aa27.36■■□□□ 1.97
U2AF1-203ENST00000398137 PSMD5Q16401 504 aa27.36■■□□□ 1.97
U2AF1-203ENST00000398137 TCERG1LQ5VWI1 586 aa27.36■■□□□ 1.97
U2AF1-203ENST00000398137 RSPO2Q6UXX9 243 aaPredicted RBP27.36■■□□□ 1.97
U2AF1-203ENST00000398137 TRAPPC11Q7Z392 1133 aa27.36■■□□□ 1.97
U2AF1-203ENST00000398137 FRMD5Q7Z6J6 570 aa27.36■■□□□ 1.97
U2AF1-203ENST00000398137 PLCD3Q8N3E9 789 aa27.36■■□□□ 1.97
U2AF1-203ENST00000398137 FBXL6Q8N531 539 aa27.36■■□□□ 1.97
U2AF1-203ENST00000398137 ENOX1Q8TC92 643 aaKnown RBP27.36■■□□□ 1.97
U2AF1-203ENST00000398137 CNOT6LQ96LI5 555 aaKnown RBP27.36■■□□□ 1.97
U2AF1-203ENST00000398137 METTL14Q9HCE5 456 aaKnown RBP27.36■■□□□ 1.97
U2AF1-203ENST00000398137 FBXW11Q9UKB1 542 aa27.36■■□□□ 1.97
U2AF1-203ENST00000398137 AGAP1Q9UPQ3 857 aa27.36■■□□□ 1.97
U2AF1-203ENST00000398137 NUB1Q9Y5A7 615 aa27.36■■□□□ 1.97
U2AF1-203ENST00000398137 ZDBF2Q9HCK1 2354 aa27.36■■□□□ 1.97
U2AF1-203ENST00000398137 PIRO00625 290 aa27.35■■□□□ 1.97
U2AF1-203ENST00000398137 GNA14O95837 355 aa27.35■■□□□ 1.97
U2AF1-203ENST00000398137 BRCC3P46736 316 aa27.35■■□□□ 1.97
U2AF1-203ENST00000398137 CREMQ03060 361 aa27.35■■□□□ 1.97
U2AF1-203ENST00000398137 ENPEPQ07075 957 aa27.35■■□□□ 1.97
U2AF1-203ENST00000398137 MTMR3Q13615 1198 aa27.35■■□□□ 1.97
U2AF1-203ENST00000398137 TDRD10Q5VZ19 366 aaKnown RBP27.35■■□□□ 1.97
U2AF1-203ENST00000398137 CYP26C1Q6V0L0 522 aa27.35■■□□□ 1.97
U2AF1-203ENST00000398137 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.35■■□□□ 1.97
U2AF1-203ENST00000398137 CXorf38Q8TB03 319 aa27.35■■□□□ 1.97
U2AF1-203ENST00000398137 SMG7Q92540 1137 aaKnown RBP27.35■■□□□ 1.97
U2AF1-203ENST00000398137 NAT10Q9H0A0 1025 aaKnown RBP27.35■■□□□ 1.97
U2AF1-203ENST00000398137 THAP9Q9H5L6 903 aa27.35■■□□□ 1.97
U2AF1-203ENST00000398137 NFE2L3Q9Y4A8 694 aa27.35■■□□□ 1.97
U2AF1-203ENST00000398137 ZMYND10O75800 440 aa27.34■■□□□ 1.97
U2AF1-203ENST00000398137 GCLMP48507 274 aa27.34■■□□□ 1.97
U2AF1-203ENST00000398137 AP3M2P53677 418 aa27.34■■□□□ 1.97
U2AF1-203ENST00000398137 VCPP55072 806 aaKnown RBP27.34■■□□□ 1.97
U2AF1-203ENST00000398137 MYL5Q02045 173 aa27.34■■□□□ 1.97
U2AF1-203ENST00000398137 PPP3CAQ08209 521 aa27.34■■□□□ 1.97
U2AF1-203ENST00000398137 ELAVL2Q12926 359 aaKnown RBP27.34■■□□□ 1.97
U2AF1-203ENST00000398137 HSP90AA4PQ58FG1 418 aa27.34■■□□□ 1.97
U2AF1-203ENST00000398137 OTOP3Q7RTS5 596 aa27.34■■□□□ 1.97
U2AF1-203ENST00000398137 IRF2BP1Q8IU81 584 aa27.34■■□□□ 1.97
U2AF1-203ENST00000398137 UBALD2Q8IYN6 164 aa27.34■■□□□ 1.97
U2AF1-203ENST00000398137 PRKD2Q9BZL6 878 aa27.34■■□□□ 1.97
U2AF1-203ENST00000398137 ZDHHC7Q9NXF8 308 aa27.34■■□□□ 1.97
U2AF1-203ENST00000398137 DPP7Q9UHL4 492 aa27.34■■□□□ 1.97
U2AF1-203ENST00000398137 CLUHO75153 1309 aa27.34■■□□□ 1.97
U2AF1-203ENST00000398137 IKBKBO14920 756 aa27.33■■□□□ 1.97
U2AF1-203ENST00000398137 PHACTR2O75167 634 aa27.33■■□□□ 1.97
U2AF1-203ENST00000398137 TKTP29401 623 aaKnown RBP27.33■■□□□ 1.97
U2AF1-203ENST00000398137 RBP5P82980 135 aa27.33■■□□□ 1.97
U2AF1-203ENST00000398137 CREBRFQ8IUR6 639 aa27.33■■□□□ 1.97
U2AF1-203ENST00000398137 AOPEPQ8N6M6 819 aa27.33■■□□□ 1.97
U2AF1-203ENST00000398137 SLC35C1Q96A29 364 aa27.33■■□□□ 1.97
U2AF1-203ENST00000398137 ZNF560Q96MR9 790 aa27.33■■□□□ 1.97
U2AF1-203ENST00000398137 MYADMQ96S97 322 aa27.33■■□□□ 1.97
U2AF1-203ENST00000398137 KCNH6Q9H252 994 aa27.33■■□□□ 1.97
U2AF1-203ENST00000398137 MTRRQ9UBK8 725 aa27.33■■□□□ 1.97
U2AF1-203ENST00000398137 SPTLC1O15269 473 aa27.32■■□□□ 1.96
U2AF1-203ENST00000398137 C4BPAP04003 597 aaKnown RBP27.32■■□□□ 1.96
U2AF1-203ENST00000398137 HOXD11P31277 338 aaPredicted RBP27.32■■□□□ 1.96
U2AF1-203ENST00000398137 MARSP56192 900 aaKnown RBP27.32■■□□□ 1.96
U2AF1-203ENST00000398137 MCCD1P59942 119 aaPredicted RBP27.32■■□□□ 1.96
U2AF1-203ENST00000398137 SV2AQ7L0J3 742 aa27.32■■□□□ 1.96
U2AF1-203ENST00000398137 TRIM59Q8IWR1 403 aa27.32■■□□□ 1.96
U2AF1-203ENST00000398137 PRSS33Q8NF86 280 aa27.32■■□□□ 1.96
U2AF1-203ENST00000398137 ACSF2Q96CM8 615 aaPredicted RBP27.32■■□□□ 1.96
U2AF1-203ENST00000398137 SAMSN1Q9NSI8 373 aaKnown RBP27.32■■□□□ 1.96
U2AF1-203ENST00000398137 R3HCC1Q9Y3T6 440 aaKnown RBP27.32■■□□□ 1.96
U2AF1-203ENST00000398137 NOTCH4Q99466 2003 aa27.32■■□□□ 1.96
U2AF1-203ENST00000398137 SCN1AP35498 2009 aa27.31■■□□□ 1.96
U2AF1-203ENST00000398137 STX10O60499 249 aa27.31■■□□□ 1.96
U2AF1-203ENST00000398137 TAF6P49848 677 aa27.31■■□□□ 1.96
U2AF1-203ENST00000398137 LILRA4P59901 499 aa27.31■■□□□ 1.96
U2AF1-203ENST00000398137 RAB33AQ14088 237 aa27.31■■□□□ 1.96
U2AF1-203ENST00000398137 ZACNQ401N2 412 aa27.31■■□□□ 1.96
U2AF1-203ENST00000398137 FAM114A1Q8IWE2 563 aa27.31■■□□□ 1.96
U2AF1-203ENST00000398137 LRRC52Q8N7C0 313 aa27.31■■□□□ 1.96
U2AF1-203ENST00000398137 KCNK12Q9HB15 430 aa27.31■■□□□ 1.96
U2AF1-203ENST00000398137 TMEM8AQ9HCN3 771 aa27.31■■□□□ 1.96
U2AF1-203ENST00000398137 MAGEC2Q9UBF1 373 aaPredicted RBP27.31■■□□□ 1.96
U2AF1-203ENST00000398137 TRAPPC3O43617 180 aa27.3■■□□□ 1.96
U2AF1-203ENST00000398137 VNN1O95497 513 aa27.3■■□□□ 1.96
U2AF1-203ENST00000398137 GTF2H1P32780 548 aa27.3■■□□□ 1.96
U2AF1-203ENST00000398137 OR1D2P34982 312 aa27.3■■□□□ 1.96
U2AF1-203ENST00000398137 PNPLA4P41247 253 aa27.3■■□□□ 1.96
U2AF1-203ENST00000398137 PIK3CAP42336 1068 aa27.3■■□□□ 1.96
U2AF1-203ENST00000398137 AARSP49588 968 aaKnown RBP eCLIP27.3■■□□□ 1.96
U2AF1-203ENST00000398137 ZNF165P49910 485 aa27.3■■□□□ 1.96
U2AF1-203ENST00000398137 MXI1P50539 228 aa27.3■■□□□ 1.96
U2AF1-203ENST00000398137 TRPC3Q13507 836 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms