RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 C3orf67Q6ZVT6 689 aa6.95□□□□□ -1.3
TM9SF4-202ENST00000398022 VPS36Q86VN1 386 aa6.95□□□□□ -1.3
TM9SF4-202ENST00000398022 NKAIN4Q8IVV8 208 aa6.95□□□□□ -1.3
TM9SF4-202ENST00000398022 CD302Q8IX05 232 aa6.95□□□□□ -1.3
TM9SF4-202ENST00000398022 PALM2Q8IXS6 379 aa6.95□□□□□ -1.3
TM9SF4-202ENST00000398022 CBARPQ8N350 705 aaPredicted RBP6.95□□□□□ -1.3
TM9SF4-202ENST00000398022 AGR3Q8TD06 166 aa6.95□□□□□ -1.3
TM9SF4-202ENST00000398022 TRIM47Q96LD4 638 aa6.95□□□□□ -1.3
TM9SF4-202ENST00000398022 MED15Q96RN5 788 aa6.95□□□□□ -1.3
TM9SF4-202ENST00000398022 LMAN2LQ9H0V9 348 aa6.95□□□□□ -1.3
TM9SF4-202ENST00000398022 BLZF1Q9H2G9 400 aa6.95□□□□□ -1.3
TM9SF4-202ENST00000398022 CENPHQ9H3R5 247 aa6.95□□□□□ -1.3
TM9SF4-202ENST00000398022 LIN28AQ9H9Z2 209 aaKnown RBP6.95□□□□□ -1.3
TM9SF4-202ENST00000398022 PCDH10Q9P2E7 1040 aa6.95□□□□□ -1.3
TM9SF4-202ENST00000398022 A0A1W2PQC6 194 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 CCNT1O60563 726 aaKnown RBP6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 SMIM24O75264 130 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 TACC1O75410 805 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 PALMO75781 387 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 ALDH3A1P30838 453 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 SLC8A1P32418 973 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 MCM7P33993 719 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 PPP1R2P41236 205 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 DNM2P50570 870 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 ARFIP1P53367 373 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 MAP3K7CLP57077 242 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 SPCS2Q15005 226 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 SPA17Q15506 151 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 ALKBH5Q6P6C2 394 aaKnown RBP6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 C11orf88Q6PI97 169 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 CCDC81Q6ZN84 652 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 ZNF554Q86TJ5 538 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 GLYCTKQ8IVS8 523 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 CADM3Q8N126 398 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 CAMKK1Q8N5S9 505 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 NKX2-3Q8TAU0 364 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 IFT81Q8WYA0 676 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 STAMQ92783 540 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 IQCDQ96DY2 449 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 SMAD5Q99717 465 aaKnown RBP6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 CIB1Q99828 191 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 DDX50Q9BQ39 737 aaKnown RBP6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 WDR6Q9NNW5 1121 aaKnown RBP6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 RNF19AQ9NV58 838 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 ZFATQ9P243 1243 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 FARP1Q9Y4F1 1045 aaPredicted RBP6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 PCDHB4Q9Y5E5 795 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 RBBP6Q7Z6E9 1792 aaKnown RBP6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 PHACTR2O75167 634 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 PRDM1O75626 825 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 CASP1P29466 404 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 LSP1P33241 339 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 MTIF2P46199 727 aaKnown RBP6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 VCPP55072 806 aaKnown RBP6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 MTMR3Q13615 1198 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 CYLC2Q14093 348 aaPredicted RBP6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 MAPKAPK3Q16644 382 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 ITPRIPL1Q6GPH6 555 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 PPP1R2P3Q6NXS1 205 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 PIK3AP1Q6ZUJ8 805 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 FLAD1Q8NFF5 587 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 OSCP1Q8WVF1 389 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 TPK1Q9H3S4 243 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 ZNF180Q9UJW8 692 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 FAM50BQ9Y247 325 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 MYH6P13533 1939 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 LGALS16A8MUM7 142 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 H3BRB1 525 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 ARHGAP33O14559 1287 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 USP1O94782 785 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 ENO2P09104 434 aaPredicted RBP6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 ALOX5P09917 674 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 IL6STP40189 918 aaPredicted RBP6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 ALDH18A1P54886 795 aaKnown RBP6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 ERVK-24P63145 666 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 SEC23AQ15436 765 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 GFOD2Q3B7J2 385 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 TMTC3Q6ZXV5 915 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 PPM1MQ96MI6 270 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 MNTQ99583 582 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 NT5C3AQ9H0P0 336 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 DPP7Q9UHL4 492 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 ADGRE2Q9UHX3 823 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 PCDHB12Q9Y5F1 795 aa6.94□□□□□ -1.3
TM9SF4-202ENST00000398022 A0A087X0B3 334 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 FAM205CA6NFA0 338 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 MASP2O00187 686 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 CSF2RAP15509 400 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 USP14P54578 494 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 RACK1P63244 317 aaKnown RBP6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 SQLEQ14534 574 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 ZNF124Q15973 351 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 MMEL1Q495T6 779 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 SIGIRRQ6IA17 410 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 VSIG1Q86XK7 387 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 SDR42E1Q8WUS8 393 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 SLC47A1Q96FL8 570 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 MED30Q96HR3 178 aa6.93□□□□□ -1.3
TM9SF4-202ENST00000398022 ADPGKQ9BRR6 497 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms