RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 THNSL1Q8IYQ7 743 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 KIRREL3Q8IZU9 778 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 UBR7Q8N806 425 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 C3orf20Q8ND61 904 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 TRAIPQ9BWF2 469 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 KLC4Q9NSK0 619 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 NEU2Q9Y3R4 380 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 PRKCBP05771 671 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ATF7P17544 494 aaPredicted RBP19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 SPRED3Q2MJR0 410 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 GKAP1Q5VSY0 366 aaPredicted RBP19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 RHPN2Q8IUC4 686 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 CACNA2D3Q8IZS8 1091 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 TMEM130Q8N3G9 435 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 EXD1Q8NHP7 514 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ZNF317Q96PQ6 595 aaPredicted RBP19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 MAF1Q9H063 256 aa19.42■□□□□ 0.7
CHRFAM7A-202ENST00000397827 TTC4O95801 387 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 EFNA5P52803 228 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 OGDHQ02218 1023 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 NFX1Q12986 1120 aaKnown RBP19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 TMEM63BQ5T3F8 832 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 TXNRD3NBQ6F5E7 133 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 GSTA5Q7RTV2 222 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 CROCCP2Q86T23 111 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 OTUD5Q96G74 571 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 IP6K2Q9UHH9 426 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 GGA2Q9UJY4 613 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 IVNS1ABPQ9Y6Y0 642 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 TMEM191CA6NGB0 347 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ADM5C9JUS6 153 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 TMEM191BP0C7N4 346 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 MAPK6Q16659 721 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 WLSQ5T9L3 541 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 CYP4A22Q5TCH4 519 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 GPAT2Q6NUI2 795 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 GLIS1Q8NBF1 620 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 TFAP2BQ92481 460 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 OSBPL7Q9BZF2 842 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 CSADQ9Y600 493 aa19.41■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ZBTB42B2RXF5 422 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 NOP56O00567 594 aaKnown RBP19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 OGTO15294 1046 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 B4GALT5O43286 388 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 TRPC3Q13507 836 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 LRRC14Q15048 493 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 DUOXA2Q1HG44 320 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 IER5Q5VY09 327 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 MFSD5Q6N075 450 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 MFSD7Q6UXD7 560 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 GPC2Q8N158 579 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 NLRP4Q96MN2 994 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 GPR20Q99678 358 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ROPN1BQ9BZX4 212 aaPredicted RBP19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ELP3Q9H9T3 547 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ROPN1Q9HAT0 212 aaPredicted RBP19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ABLIM1O14639 778 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 TGFB3P10600 412 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 IZUMO3Q5VZ72 239 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 DCUN1D2Q6PH85 259 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 CCDC121Q6ZUS5 278 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 WDTC1Q8N5D0 677 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 MGARPQ8TDB4 240 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 ARHGEF2Q92974 986 aaKnown RBP19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 NIF3L1Q9GZT8 377 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 STMN4Q9H169 189 aaPredicted RBP19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 HOMER3Q9NSC5 361 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 NINJ2Q9NZG7 142 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 CPSF3Q9UKF6 684 aaKnown RBP19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 DNPEPQ9ULA0 475 aa19.4■□□□□ 0.7
CHRFAM7A-202ENST00000397827 KRT1P04264 644 aa19.39■□□□□ 0.7
CHRFAM7A-202ENST00000397827 R3HDM1Q15032 1099 aaKnown RBP19.39■□□□□ 0.7
CHRFAM7A-202ENST00000397827 DNAJC24Q6P3W2 148 aa19.39■□□□□ 0.7
CHRFAM7A-202ENST00000397827 LRRC34Q8IZ02 419 aa19.39■□□□□ 0.7
CHRFAM7A-202ENST00000397827 CCDC89Q8N998 374 aa19.39■□□□□ 0.7
CHRFAM7A-202ENST00000397827 COPS5Q92905 334 aa19.39■□□□□ 0.7
CHRFAM7A-202ENST00000397827 HAUS1Q96CS2 278 aa19.39■□□□□ 0.7
CHRFAM7A-202ENST00000397827 C9orf72Q96LT7 481 aa19.39■□□□□ 0.7
CHRFAM7A-202ENST00000397827 FHDC1Q9C0D6 1143 aaPredicted RBP19.39■□□□□ 0.7
CHRFAM7A-202ENST00000397827 SKAP2O75563 359 aaPredicted RBP19.39■□□□□ 0.69
CHRFAM7A-202ENST00000397827 HOXC6P09630 235 aa19.39■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ZSCAN5DPP0CG00 497 aa19.39■□□□□ 0.69
CHRFAM7A-202ENST00000397827 SGSM1Q2NKQ1 1148 aa19.39■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CDCA2Q69YH5 1023 aaPredicted RBP19.39■□□□□ 0.69
CHRFAM7A-202ENST00000397827 TAOK1Q7L7X3 1001 aa19.39■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ZBTB8OSQ8IWT0 167 aa19.39■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CLMNQ96JQ2 1002 aa19.39■□□□□ 0.69
CHRFAM7A-202ENST00000397827 SLITRK1Q96PX8 696 aa19.39■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ASCC2Q9H1I8 757 aaPredicted RBP19.39■□□□□ 0.69
CHRFAM7A-202ENST00000397827 TXNRD2Q9NNW7 524 aa19.39■□□□□ 0.69
CHRFAM7A-202ENST00000397827 NXF1Q9UBU9 619 aaKnown RBP19.39■□□□□ 0.69
CHRFAM7A-202ENST00000397827 TBK1Q9UHD2 729 aa19.39■□□□□ 0.69
CHRFAM7A-202ENST00000397827 INO80B-WBP1J3KQ70 363 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ATP2C2O75185 946 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 AP3M2P53677 418 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 MCL1Q07820 350 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CNGA2Q16280 664 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ZNF699Q32M78 642 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 P3H1Q32P28 736 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ARMC9Q7Z3E5 817 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms