RNA–Protein interactions for RNA: ENST00000397795.6

TRPM1-202, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM1, Length 5,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-202ENST00000397795 SLC1A4P43007 532 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 POLGP54098 1239 aaPredicted RBP9.48□□□□□ -0.89
TRPM1-202ENST00000397795 ARF3P61204 181 aaPredicted RBP9.48□□□□□ -0.89
TRPM1-202ENST00000397795 ARF1P84077 181 aaKnown RBP9.48□□□□□ -0.89
TRPM1-202ENST00000397795 PKN2Q16513 984 aaKnown RBP9.48□□□□□ -0.89
TRPM1-202ENST00000397795 SHROOM1Q2M3G4 852 aaPredicted RBP9.48□□□□□ -0.89
TRPM1-202ENST00000397795 NEK5Q6P3R8 708 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 TOM1L2Q6ZVM7 507 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 NCCRP1Q6ZVX7 275 aaPredicted RBP9.48□□□□□ -0.89
TRPM1-202ENST00000397795 RBBP8Q99708 897 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 LBHD1Q9BQE6 289 aaPredicted RBP9.48□□□□□ -0.89
TRPM1-202ENST00000397795 VTA1Q9NP79 307 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 NPHS2Q9NP85 383 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 STOX2Q9P2F5 926 aaPredicted RBP9.48□□□□□ -0.89
TRPM1-202ENST00000397795 RFX7Q2KHR2 1363 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 EXTL3O43909 919 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 FCGR1AP12314 374 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 SLC29A2Q14542 456 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 KIAA1755Q5JYT7 1200 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 FBXO42Q6P3S6 717 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 LRRC6Q86X45 466 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 CLVS1Q8IUQ0 354 aaPredicted RBP9.48□□□□□ -0.89
TRPM1-202ENST00000397795 NUP93Q8N1F7 819 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 FAM172AQ8WUF8 416 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 NT5C1BQ96P26 610 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 CASS4Q9NQ75 786 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 TUBGCP4Q9UGJ1 667 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 LRRC42Q9Y546 428 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 MAP3K15Q6ZN16 1313 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 IFNA16P05015 189 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 LMBRD2Q68DH5 695 aaPredicted RBP9.48□□□□□ -0.89
TRPM1-202ENST00000397795 LIN54Q6MZP7 749 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 ERICH5Q6P6B1 374 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 ALKBH5Q6P6C2 394 aaKnown RBP9.48□□□□□ -0.89
TRPM1-202ENST00000397795 SHCBP1Q8NEM2 672 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 SIPA1Q96FS4 1042 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 MAGEB18Q96M61 343 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 CCDC115Q96NT0 180 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 C7orf25Q9BPX7 421 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 ASAP1Q9ULH1 1129 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 BARX2Q9UMQ3 279 aaPredicted RBP9.48□□□□□ -0.89
TRPM1-202ENST00000397795 PCDHGA4Q9Y5G9 962 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 MATN2O00339 956 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 ECDO95905 644 aaPredicted RBP9.48□□□□□ -0.89
TRPM1-202ENST00000397795 BNIP1Q12981 228 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 MYBPC3Q14896 1274 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 PMF1Q6P1K2 205 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 TAF2Q6P1X5 1199 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 GPBP1Q86WP2 473 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 ARHGEF19Q8IW93 802 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 FNIP1Q8TF40 1166 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 TIPINQ9BVW5 301 aa9.48□□□□□ -0.89
TRPM1-202ENST00000397795 ZSCAN5CA6NGD5 496 aaPredicted RBP9.47□□□□□ -0.89
TRPM1-202ENST00000397795 LGR5O75473 907 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 GGPS1O95749 300 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 NPR3P17342 541 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 CAPZA2P47755 286 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 NSUN2Q08J23 767 aaKnown RBP eCLIP9.47□□□□□ -0.89
TRPM1-202ENST00000397795 DPYDQ12882 1025 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 TYSND1Q2T9J0 566 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 ZC2HC1CQ53FD0 456 aaPredicted RBP9.47□□□□□ -0.89
TRPM1-202ENST00000397795 ANKRD13DQ6ZTN6 518 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 SYTL1Q8IYJ3 562 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 ANKRD49Q8WVL7 239 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 USP13Q92995 863 aaPredicted RBP9.47□□□□□ -0.89
TRPM1-202ENST00000397795 XKR8Q9H6D3 395 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 PICK1Q9NRD5 415 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 NMRK1Q9NWW6 199 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 CEP72Q9P209 647 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 CRNNQ9UBG3 495 aaPredicted RBP9.47□□□□□ -0.89
TRPM1-202ENST00000397795 GPN3Q9UHW5 284 aaPredicted RBP9.47□□□□□ -0.89
TRPM1-202ENST00000397795 PLAGL2Q9UPG8 496 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 CLTCL1P53675 1640 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 TRIM64A6NGJ6 449 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 TRIM64BA6NI03 449 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 PPP1R3GB7ZBB8 358 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 FKBP9O95302 570 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 ATF3P18847 181 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 MXI1P50539 228 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 COPAP53621 1224 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 DYNLT1P63172 113 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 TTLL12Q14166 644 aaPredicted RBP9.47□□□□□ -0.89
TRPM1-202ENST00000397795 NT5DC1Q5TFE4 455 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 FKBP9P1Q75LS8 142 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 HACE1Q8IYU2 909 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 RIBC1Q8N443 379 aaPredicted RBP9.47□□□□□ -0.89
TRPM1-202ENST00000397795 PIK3C3Q8NEB9 887 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 TMIEQ8NEW7 156 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 CABLES1Q8TDN4 633 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 TRABDQ9H4I3 376 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 IVNS1ABPQ9Y6Y0 642 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 MED23Q9ULK4 1368 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 CLRN2A0PK11 232 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 FANCGO15287 622 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 CDH16O75309 829 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 APOC1P02654 83 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 PSMD4P55036 377 aaKnown RBP9.47□□□□□ -0.89
TRPM1-202ENST00000397795 TIMM10P62072 90 aa9.47□□□□□ -0.89
TRPM1-202ENST00000397795 RPL19P84098 196 aaKnown RBP9.47□□□□□ -0.89
TRPM1-202ENST00000397795 HSF2Q03933 536 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms