RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 BMP1P13497 986 aa18.12■□□□□ 0.49
TSPAN4-205ENST00000397406 P4HA1P13674 534 aa18.12■□□□□ 0.49
TSPAN4-205ENST00000397406 KCNQ1P51787 676 aa18.12■□□□□ 0.49
TSPAN4-205ENST00000397406 ARID5AQ03989 594 aa18.12■□□□□ 0.49
TSPAN4-205ENST00000397406 SMYD5Q6GMV2 418 aa18.12■□□□□ 0.49
TSPAN4-205ENST00000397406 ZNF280BQ86YH2 543 aa18.12■□□□□ 0.49
TSPAN4-205ENST00000397406 FMNL3Q8IVF7 1028 aa18.12■□□□□ 0.49
TSPAN4-205ENST00000397406 ABI1Q8IZP0 508 aa18.12■□□□□ 0.49
TSPAN4-205ENST00000397406 RSPH1Q8WYR4 309 aa18.12■□□□□ 0.49
TSPAN4-205ENST00000397406 UROC1Q96N76 676 aa18.12■□□□□ 0.49
TSPAN4-205ENST00000397406 PAAF1Q9BRP4 392 aa18.12■□□□□ 0.49
TSPAN4-205ENST00000397406 SMYD3Q9H7B4 428 aa18.12■□□□□ 0.49
TSPAN4-205ENST00000397406 GDAP2Q9NXN4 497 aa18.12■□□□□ 0.49
TSPAN4-205ENST00000397406 SOWAHDA6NJG2 315 aa18.11■□□□□ 0.49
TSPAN4-205ENST00000397406 DDHD2O94830 711 aa18.11■□□□□ 0.49
TSPAN4-205ENST00000397406 PLEKP08567 350 aaPredicted RBP18.11■□□□□ 0.49
TSPAN4-205ENST00000397406 WEE2P0C1S8 567 aa18.11■□□□□ 0.49
TSPAN4-205ENST00000397406 IGFBP6P24592 240 aaPredicted RBP18.11■□□□□ 0.49
TSPAN4-205ENST00000397406 CLCN1P35523 988 aa18.11■□□□□ 0.49
TSPAN4-205ENST00000397406 RAP1GAPP47736 663 aa18.11■□□□□ 0.49
TSPAN4-205ENST00000397406 LILRA4P59901 499 aa18.11■□□□□ 0.49
TSPAN4-205ENST00000397406 TNNC1P63316 161 aa18.11■□□□□ 0.49
TSPAN4-205ENST00000397406 MRPS5P82675 430 aaKnown RBP18.11■□□□□ 0.49
TSPAN4-205ENST00000397406 SV2CQ496J9 727 aa18.11■□□□□ 0.49
TSPAN4-205ENST00000397406 RAD9BQ6WBX8 426 aa18.11■□□□□ 0.49
TSPAN4-205ENST00000397406 C3orf58Q8NDZ4 430 aa18.11■□□□□ 0.49
TSPAN4-205ENST00000397406 DDX27Q96GQ7 796 aaKnown RBP18.11■□□□□ 0.49
TSPAN4-205ENST00000397406 YME1L1Q96TA2 773 aa18.11■□□□□ 0.49
TSPAN4-205ENST00000397406 CYP3A43Q9HB55 503 aa18.11■□□□□ 0.49
TSPAN4-205ENST00000397406 CISHQ9NSE2 258 aa18.11■□□□□ 0.49
TSPAN4-205ENST00000397406 PYCARDQ9ULZ3 195 aa18.11■□□□□ 0.49
TSPAN4-205ENST00000397406 KPNA7A9QM74 516 aa18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 ARHGAP6O43182 974 aa18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 NRDCO43847 1150 aa18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 DGKIO75912 1065 aa18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 CDH8P55286 799 aa18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 KLHL30Q0D2K2 578 aa18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 MAPK8IP2Q13387 824 aaPredicted RBP18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 MTF1Q14872 753 aa18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 CD300LGQ6UXG3 332 aa18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 LIMS2Q7Z4I7 341 aa18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 COLGALT2Q8IYK4 626 aa18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 FBXO22Q8NEZ5 403 aa18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 RABGGTAQ92696 567 aa18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 NECAB3Q96P71 396 aaPredicted RBP18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 FAM124BQ9H5Z6 455 aaPredicted RBP18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 HAUS4Q9H6D7 363 aa18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 NHEJ1Q9H9Q4 299 aaPredicted RBP18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 LMCD1Q9NZU5 365 aa18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 PCDHB4Q9Y5E5 795 aa18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 SNX9Q9Y5X1 595 aa18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 KIAA1671Q9BY89 1806 aa18.1■□□□□ 0.49
TSPAN4-205ENST00000397406 SSU72P8A0A1W2PR75 194 aa18.09■□□□□ 0.49
TSPAN4-205ENST00000397406 TBKBP1A7MCY6 615 aa18.09■□□□□ 0.49
TSPAN4-205ENST00000397406 CYP26A1O43174 497 aa18.09■□□□□ 0.49
TSPAN4-205ENST00000397406 CCDC172P0C7W6 258 aa18.09■□□□□ 0.49
TSPAN4-205ENST00000397406 KRT5P13647 590 aa18.09■□□□□ 0.49
TSPAN4-205ENST00000397406 CD58P19256 250 aa18.09■□□□□ 0.49
TSPAN4-205ENST00000397406 USP8P40818 1118 aa18.09■□□□□ 0.49
TSPAN4-205ENST00000397406 AARSP49588 968 aaKnown RBP eCLIP18.09■□□□□ 0.498e-6■■■■■ 52.4
TSPAN4-205ENST00000397406 ZNF132P52740 706 aa18.09■□□□□ 0.49
TSPAN4-205ENST00000397406 YWHAEP62258 255 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-205ENST00000397406 RNASELQ05823 741 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-205ENST00000397406 INCA1Q0VD86 236 aa18.09■□□□□ 0.49
TSPAN4-205ENST00000397406 TDRD12Q587J7 1177 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-205ENST00000397406 OLIG1Q8TAK6 271 aa18.09■□□□□ 0.49
TSPAN4-205ENST00000397406 SYT11Q9BT88 431 aa18.09■□□□□ 0.49
TSPAN4-205ENST00000397406 MRPL9Q9BYD2 267 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-205ENST00000397406 NRDE2Q9H7Z3 1164 aa18.09■□□□□ 0.49
TSPAN4-205ENST00000397406 DNAJB4Q9UDY4 337 aa18.09■□□□□ 0.49
TSPAN4-205ENST00000397406 ZKSCAN5Q9Y2L8 839 aa18.09■□□□□ 0.49
TSPAN4-205ENST00000397406 BZW2Q9Y6E2 419 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-205ENST00000397406 H3BNC9 293 aa18.08■□□□□ 0.49
TSPAN4-205ENST00000397406 EIF4A3P38919 411 aaKnown RBP18.08■□□□□ 0.49
TSPAN4-205ENST00000397406 PTK2Q05397 1052 aa18.08■□□□□ 0.49
TSPAN4-205ENST00000397406 SKIV2LQ15477 1246 aaKnown RBP18.08■□□□□ 0.49
TSPAN4-205ENST00000397406 SOWAHAQ2M3V2 549 aa18.08■□□□□ 0.49
TSPAN4-205ENST00000397406 ASTE1Q2TB18 679 aaPredicted RBP18.08■□□□□ 0.49
TSPAN4-205ENST00000397406 TMEM270Q6UE05 265 aa18.08■□□□□ 0.49
TSPAN4-205ENST00000397406 ZNF571Q7Z3V5 609 aaPredicted RBP18.08■□□□□ 0.49
TSPAN4-205ENST00000397406 RBBP8NLQ8NC74 664 aaPredicted RBP18.08■□□□□ 0.49
TSPAN4-205ENST00000397406 FAM193BQ96PV7 902 aaPredicted RBP18.08■□□□□ 0.49
TSPAN4-205ENST00000397406 MMS19Q96T76 1030 aa18.08■□□□□ 0.49
TSPAN4-205ENST00000397406 TMEM189-UBE2V1I3L0A0 370 aa18.07■□□□□ 0.48
TSPAN4-205ENST00000397406 DCLRE1AQ6PJP8 1040 aa18.07■□□□□ 0.48
TSPAN4-205ENST00000397406 SLC47A2Q86VL8 602 aa18.07■□□□□ 0.48
TSPAN4-205ENST00000397406 CCDC170Q8IYT3 715 aa18.07■□□□□ 0.48
TSPAN4-205ENST00000397406 ADAMTS19Q8TE59 1207 aa18.07■□□□□ 0.48
TSPAN4-205ENST00000397406 EPS8L1Q8TE68 723 aa18.07■□□□□ 0.48
TSPAN4-205ENST00000397406 WHAMMQ8TF30 809 aa18.07■□□□□ 0.48
TSPAN4-205ENST00000397406 CLP1Q92989 425 aaKnown RBP18.07■□□□□ 0.48
TSPAN4-205ENST00000397406 ACP6Q9NPH0 428 aa18.07■□□□□ 0.48
TSPAN4-205ENST00000397406 HCSTQ9UBK5 93 aa18.07■□□□□ 0.48
TSPAN4-205ENST00000397406 NOCTQ9UK39 431 aaKnown RBP18.07■□□□□ 0.48
TSPAN4-205ENST00000397406 L1RE1Q9UN81 338 aa18.07■□□□□ 0.48
TSPAN4-205ENST00000397406 F8W810 466 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 CILPO75339 1184 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 TACC1O75410 805 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 B3GAT3O94766 335 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms