RNA–Protein interactions for RNA: ENST00000397224.8

FOXRED2-204, Transcript of FAD dependent oxidoreductase domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXRED2, Length 4,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED2-204ENST00000397224 DNAJC3Q13217 504 aa16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 SV2AQ7L0J3 742 aa16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 URGCPQ8TCY9 931 aa16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 PARD3BQ8TEW8 1205 aa16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 PRPF31Q8WWY3 499 aaKnown RBP16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 TRIM15Q9C019 465 aa16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 YIPF3Q9GZM5 350 aa16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 MYOM1P52179 1685 aa16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 SNRPAP09012 282 aaKnown RBP16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 CTSHP09668 335 aa16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 ITGA4P13612 1032 aa16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 GARTP22102 1010 aa16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 ORC1Q13415 861 aa16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 EFTUD2Q15029 972 aaKnown RBP eCLIP16.36■□□□□ 0.211e-9■■■□□ 14.8
FOXRED2-204ENST00000397224 LONP2Q86WA8 852 aa16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 RAB21Q9UL25 225 aa16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 PFDN1O60925 122 aa16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 DEUP1Q05D60 604 aa16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 RIBC1Q8N443 379 aaPredicted RBP16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 ZNF507Q8TCN5 953 aa16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 SYTL5Q8TDW5 730 aaPredicted RBP16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 TMBIM4Q9HC24 238 aa16.36■□□□□ 0.21
FOXRED2-204ENST00000397224 PSTPIP1O43586 416 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 GOLGA7BQ2TAP0 167 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 DCAF6Q58WW2 860 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 KCNT1Q5JUK3 1230 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 SLC35C1Q96A29 364 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 CAND2O75155 1236 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 SLITRK3O94933 977 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 RARGP13631 454 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 SOX10P56693 466 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 NLRP11P59045 1033 aaKnown RBP16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 HIC1Q14526 733 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 SLC15A2Q16348 729 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 GIPC2Q8TF65 315 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 RMDN2Q96LZ7 410 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 PDCD2LQ9BRP1 358 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 SPAG6O75602 509 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 CPB1P15086 417 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 CTCFP49711 727 aaPredicted RBP16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 SERPINB9P50453 376 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 C4orf19Q8IY42 314 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 AGGF1Q8N302 714 aaeCLIP16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 TMC2Q8TDI7 906 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 TRIM62Q9BVG3 475 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 FAM129AQ9BZQ8 928 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 SMAPO00193 183 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 EEF2KO00418 725 aaKnown RBP16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 GRIK1P39086 918 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 BACE1P56817 501 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 TMEM259Q4ZIN3 620 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 INTS13Q9NVM9 706 aa16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 MAP3K20Q9NYL2 800 aaKnown RBP16.35■□□□□ 0.21
FOXRED2-204ENST00000397224 TNPO2O14787 897 aaKnown RBP16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 CD4P01730 458 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 SUPT20HL2P0C7V6 817 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 NAMPTP43490 491 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 SNAPC2Q13487 334 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 PCNX4Q63HM2 1172 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 FAM163AQ96GL9 167 aaPredicted RBP16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 AGO4Q9HCK5 861 aaKnown RBP16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 HACD3Q9P035 362 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 RNF103-CHMP3A0A140T963 221 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 E5RI56 91 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 HNRNPCL1O60812 293 aaKnown RBP16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 CYP2C9P11712 490 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 ZNF235Q14590 738 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 MEA1Q16626 185 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 FAXCQ5TGI0 409 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 NDUFAF2Q8N183 169 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 E2F8A0AVK6 867 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 MGEA5O60502 916 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 ZC3H11AO75152 810 aaKnown RBP eCLIP16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 VCAM1P19320 739 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 GEMIN4P57678 1058 aaKnown RBP16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 CYP24A1Q07973 514 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 BOLA3Q53S33 107 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 NCLNQ969V3 563 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 RMDN1Q96DB5 314 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 GCNAQ96QF7 691 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 A0A0U1RQJ8 604 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 NEMP1O14524 444 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 SASH3O75995 380 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 MAP3K6O95382 1288 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 C6orf222P0C671 652 aaPredicted RBP16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 OTOP1Q7RTM1 612 aa16.34■□□□□ 0.21
FOXRED2-204ENST00000397224 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.34■□□□□ 0.214e-6■■□□□ 12.1
FOXRED2-204ENST00000397224 KRT4P19013 534 aa16.33■□□□□ 0.21
FOXRED2-204ENST00000397224 RARRES1P49788 294 aa16.33■□□□□ 0.21
FOXRED2-204ENST00000397224 CLCN3P51790 818 aa16.33■□□□□ 0.21
FOXRED2-204ENST00000397224 MYBPC2Q14324 1141 aa16.33■□□□□ 0.21
FOXRED2-204ENST00000397224 GRIK5Q16478 980 aa16.33■□□□□ 0.21
FOXRED2-204ENST00000397224 CAVIN3Q969G5 261 aa16.33■□□□□ 0.21
FOXRED2-204ENST00000397224 ULK4Q96C45 1275 aa16.33■□□□□ 0.21
FOXRED2-204ENST00000397224 MTMR9Q96QG7 549 aa16.33■□□□□ 0.21
FOXRED2-204ENST00000397224 TSPYL2Q9H2G4 693 aaPredicted RBP16.33■□□□□ 0.21
FOXRED2-204ENST00000397224 MRPL40Q9NQ50 206 aaKnown RBP16.33■□□□□ 0.21
FOXRED2-204ENST00000397224 FOXD4Q12950 439 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms