RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 PRKCQQ04759 706 aa13.05□□□□□ -0.32
GAPDH-202ENST00000396856 KCNA1Q09470 495 aa13.05□□□□□ -0.32
GAPDH-202ENST00000396856 CRELD2Q6UXH1 353 aaPredicted RBP13.05□□□□□ -0.32
GAPDH-202ENST00000396856 TMEM130Q8N3G9 435 aa13.05□□□□□ -0.32
GAPDH-202ENST00000396856 ELSPBP1Q96BH3 223 aa13.05□□□□□ -0.32
GAPDH-202ENST00000396856 KXD1Q9BQD3 176 aa13.05□□□□□ -0.32
GAPDH-202ENST00000396856 EPC1Q9H2F5 836 aa13.05□□□□□ -0.32
GAPDH-202ENST00000396856 DPP3Q9NY33 737 aa13.05□□□□□ -0.32
GAPDH-202ENST00000396856 NCDNQ9UBB6 729 aa13.05□□□□□ -0.32
GAPDH-202ENST00000396856 YIPF1Q9Y548 306 aa13.05□□□□□ -0.32
GAPDH-202ENST00000396856 PCDHGA2Q9Y5H1 932 aa13.05□□□□□ -0.32
GAPDH-202ENST00000396856 FAM208BQ5VWN6 2430 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 ANKRD11Q6UB99 2663 aaPredicted RBP13.04□□□□□ -0.32
GAPDH-202ENST00000396856 KIAA0391O15091 583 aaKnown RBP13.04□□□□□ -0.32
GAPDH-202ENST00000396856 CUTAO60888 179 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 ZSCAN22P10073 491 aaPredicted RBP13.04□□□□□ -0.32
GAPDH-202ENST00000396856 ANP32AP39687 249 aaKnown RBP13.04□□□□□ -0.32
GAPDH-202ENST00000396856 PNPLA4P41247 253 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 ALDH1A3P47895 512 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 EPHB3P54753 998 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 MLF2Q15773 248 aaPredicted RBP13.04□□□□□ -0.32
GAPDH-202ENST00000396856 SV2CQ496J9 727 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 ATL3Q6DD88 541 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 METTL23Q86XA0 190 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 BRSK2Q8IWQ3 736 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 THEM5Q8N1Q8 247 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 IQUBQ8NA54 791 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 ST13P5Q8NFI4 369 aaPredicted RBP13.04□□□□□ -0.32
GAPDH-202ENST00000396856 CACTINQ8WUQ7 758 aaKnown RBP13.04□□□□□ -0.32
GAPDH-202ENST00000396856 ZNF560Q96MR9 790 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 PGLYRP2Q96PD5 576 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 FAM213AQ9BRX8 229 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 GPR88Q9GZN0 384 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 MAGEF1Q9HAY2 307 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 ZFP14Q9HCL3 533 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 CEP72Q9P209 647 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 CDV3Q9UKY7 258 aaKnown RBP13.04□□□□□ -0.32
GAPDH-202ENST00000396856 MTF2Q9Y483 593 aaPredicted RBP13.04□□□□□ -0.32
GAPDH-202ENST00000396856 ASB3Q9Y575 518 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 COL4A3Q01955 1670 aa13.04□□□□□ -0.32
GAPDH-202ENST00000396856 MTMR11A4FU01 709 aa13.03□□□□□ -0.32
GAPDH-202ENST00000396856 CYB561D2O14569 222 aa13.03□□□□□ -0.32
GAPDH-202ENST00000396856 EXTL3O43909 919 aa13.03□□□□□ -0.32
GAPDH-202ENST00000396856 FGF19O95750 216 aa13.03□□□□□ -0.32
GAPDH-202ENST00000396856 OR4Q2P0C623 313 aa13.03□□□□□ -0.32
GAPDH-202ENST00000396856 HOXB3P14651 431 aaPredicted RBP13.03□□□□□ -0.32
GAPDH-202ENST00000396856 CCR2P41597 374 aa13.03□□□□□ -0.32
GAPDH-202ENST00000396856 CASP5P51878 434 aa13.03□□□□□ -0.32
GAPDH-202ENST00000396856 SMARCB1Q12824 385 aa13.03□□□□□ -0.32
GAPDH-202ENST00000396856 DUSP4Q13115 394 aa13.03□□□□□ -0.32
GAPDH-202ENST00000396856 SNW1Q13573 536 aaKnown RBP13.03□□□□□ -0.32
GAPDH-202ENST00000396856 E2F4Q16254 413 aa13.03□□□□□ -0.32
GAPDH-202ENST00000396856 SLC44A4Q53GD3 710 aa13.03□□□□□ -0.32
GAPDH-202ENST00000396856 CENPPQ6IPU0 288 aa13.03□□□□□ -0.32
GAPDH-202ENST00000396856 EFCAB13Q8IY85 973 aa13.03□□□□□ -0.32
GAPDH-202ENST00000396856 TCEAL4Q96EI5 215 aa13.03□□□□□ -0.32
GAPDH-202ENST00000396856 ASB16Q96NS5 453 aa13.03□□□□□ -0.32
GAPDH-202ENST00000396856 PYM1Q9BRP8 204 aaKnown RBP13.03□□□□□ -0.32
GAPDH-202ENST00000396856 TRIM9Q9C026 710 aa13.03□□□□□ -0.32
GAPDH-202ENST00000396856 IKZF4Q9H2S9 585 aa13.03□□□□□ -0.32
GAPDH-202ENST00000396856 KBTBD4Q9NVX7 518 aa13.03□□□□□ -0.32
GAPDH-202ENST00000396856 RBAKQ9NYW8 714 aaPredicted RBP13.03□□□□□ -0.32
GAPDH-202ENST00000396856 TFIP11Q9UBB9 837 aaKnown RBP13.03□□□□□ -0.32
GAPDH-202ENST00000396856 PATJQ8NI35 1801 aa13.02□□□□□ -0.32
GAPDH-202ENST00000396856 NOTCH4Q99466 2003 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 KANSL1LA0AUZ9 987 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 KPNA7A9QM74 516 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 VNN2O95498 520 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 MYL4P12829 197 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 TUFMP49411 452 aaKnown RBP13.02□□□□□ -0.33
GAPDH-202ENST00000396856 TFAMQ00059 246 aaKnown RBP13.02□□□□□ -0.33
GAPDH-202ENST00000396856 PPM1JQ5JR12 505 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 FAM78AQ5JUQ0 283 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 TANGO2Q6ICL3 276 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 CNNM4Q6P4Q7 775 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 ITIH5Q86UX2 942 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 HS6ST3Q8IZP7 471 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 ATAD1Q8NBU5 361 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 C2orf15Q8WU43 125 aaKnown RBP13.02□□□□□ -0.33
GAPDH-202ENST00000396856 DNASE1L2Q92874 299 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 SMARCD2Q92925 531 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 E2F7Q96AV8 911 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 DHX58Q96C10 678 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 SAAL1Q96ER3 474 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 OSBPL6Q9BZF3 934 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 ZCWPW1Q9H0M4 648 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 TRPV4Q9HBA0 871 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 ITGA11Q9UKX5 1188 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 SMG5Q9UPR3 1016 aaKnown RBP13.02□□□□□ -0.33
GAPDH-202ENST00000396856 WDFY3Q8IZQ1 3526 aa13.02□□□□□ -0.33
GAPDH-202ENST00000396856 FASNP49327 2511 aaKnown RBP13.02□□□□□ -0.33
GAPDH-202ENST00000396856 CEP295Q9C0D2 2601 aa13.01□□□□□ -0.33
GAPDH-202ENST00000396856 SLC30A4O14863 429 aa13.01□□□□□ -0.33
GAPDH-202ENST00000396856 EIF3DO15371 548 aaKnown RBP eCLIP13.01□□□□□ -0.33
GAPDH-202ENST00000396856 PRPF6O94906 941 aaKnown RBP13.01□□□□□ -0.33
GAPDH-202ENST00000396856 F13A1P00488 732 aa13.01□□□□□ -0.33
GAPDH-202ENST00000396856 FCARP24071 287 aa13.01□□□□□ -0.33
GAPDH-202ENST00000396856 MAGEA9P43362 315 aa13.01□□□□□ -0.33
GAPDH-202ENST00000396856 ASIC1P78348 528 aa13.01□□□□□ -0.33
GAPDH-202ENST00000396856 CSTF1Q05048 431 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms