RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 PKMYT1Q99640 499 aa17.47■□□□□ 0.39
CXCL12-206ENST00000395795 C7orf25Q9BPX7 421 aa17.47■□□□□ 0.39
CXCL12-206ENST00000395795 PYM1Q9BRP8 204 aaKnown RBP17.47■□□□□ 0.39
CXCL12-206ENST00000395795 PCIF1Q9H4Z3 704 aa17.47■□□□□ 0.39
CXCL12-206ENST00000395795 IL21Q9HBE4 155 aa17.47■□□□□ 0.39
CXCL12-206ENST00000395795 PDE11AQ9HCR9 933 aa17.47■□□□□ 0.39
CXCL12-206ENST00000395795 TMLHEQ9NVH6 421 aa17.47■□□□□ 0.39
CXCL12-206ENST00000395795 PCDHA7Q9UN72 937 aa17.47■□□□□ 0.39
CXCL12-206ENST00000395795 F5P12259 2224 aa17.47■□□□□ 0.39
CXCL12-206ENST00000395795 PRR23AA6NEV1 266 aa17.46■□□□□ 0.39
CXCL12-206ENST00000395795 KPNA7A9QM74 516 aa17.46■□□□□ 0.39
CXCL12-206ENST00000395795 TGFB1I1O43294 461 aa17.46■□□□□ 0.39
CXCL12-206ENST00000395795 GFRA3O60609 400 aa17.46■□□□□ 0.39
CXCL12-206ENST00000395795 MYL4P12829 197 aa17.46■□□□□ 0.39
CXCL12-206ENST00000395795 PRKCQQ04759 706 aa17.46■□□□□ 0.39
CXCL12-206ENST00000395795 GRM2Q14416 872 aa17.46■□□□□ 0.39
CXCL12-206ENST00000395795 CYP4A22Q5TCH4 519 aa17.46■□□□□ 0.39
CXCL12-206ENST00000395795 LIMS2Q7Z4I7 341 aa17.46■□□□□ 0.39
CXCL12-206ENST00000395795 DNAJB7Q7Z6W7 309 aaPredicted RBP17.46■□□□□ 0.39
CXCL12-206ENST00000395795 LEMD2Q8NC56 503 aa17.46■□□□□ 0.39
CXCL12-206ENST00000395795 SMARCD2Q92925 531 aa17.46■□□□□ 0.39
CXCL12-206ENST00000395795 PSMG2Q969U7 264 aa17.46■□□□□ 0.39
CXCL12-206ENST00000395795 DHX58Q96C10 678 aa17.46■□□□□ 0.39
CXCL12-206ENST00000395795 CHAMP1Q96JM3 812 aa17.46■□□□□ 0.39
CXCL12-206ENST00000395795 GZF1Q9H116 711 aaPredicted RBP17.46■□□□□ 0.39
CXCL12-206ENST00000395795 CUEDC2Q9H467 287 aa17.46■□□□□ 0.39
CXCL12-206ENST00000395795 LTB4R2Q9NPC1 389 aa17.46■□□□□ 0.39
CXCL12-206ENST00000395795 ASAH2Q9NR71 780 aa17.46■□□□□ 0.39
CXCL12-206ENST00000395795 RBAKQ9NYW8 714 aaPredicted RBP17.46■□□□□ 0.39
CXCL12-206ENST00000395795 L1RE1Q9UN81 338 aa17.46■□□□□ 0.39
CXCL12-206ENST00000395795 ZDHHC9Q9Y397 364 aa17.46■□□□□ 0.39
CXCL12-206ENST00000395795 VPS13AQ96RL7 3174 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 A0A1W2PRU2 124 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 TARSP26639 723 aaKnown RBP17.45■□□□□ 0.38
CXCL12-206ENST00000395795 POLR2BP30876 1174 aaKnown RBP17.45■□□□□ 0.38
CXCL12-206ENST00000395795 TFAMQ00059 246 aaKnown RBP17.45■□□□□ 0.38
CXCL12-206ENST00000395795 CCDC142Q17RM4 750 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 FOXD4L6Q3SYB3 417 aaPredicted RBP17.45■□□□□ 0.38
CXCL12-206ENST00000395795 SLC39A12Q504Y0 691 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 RESP18Q5W5W9 173 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 IQCEQ6IPM2 695 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 FOXD4L3Q6VB84 417 aaPredicted RBP17.45■□□□□ 0.38
CXCL12-206ENST00000395795 TMEM150AQ86TG1 271 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 OSTM1Q86WC4 334 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 CBWD2Q8IUF1 395 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 CCDC65Q8IXS2 484 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 PDCL2Q8N4E4 241 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 OR5B17Q8NGF7 314 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 ZSCAN18Q8TBC5 510 aaPredicted RBP17.45■□□□□ 0.38
CXCL12-206ENST00000395795 ZNF507Q8TCN5 953 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 CLDN23Q96B33 292 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 LPIN3Q9BQK8 851 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 OSBPL6Q9BZF3 934 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 TMEM206Q9H813 350 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 ZFP14Q9HCL3 533 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 HEBP1Q9NRV9 189 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 DSEQ9UL01 958 aa17.45■□□□□ 0.38
CXCL12-206ENST00000395795 RIF1Q5UIP0 2472 aaKnown RBP17.45■□□□□ 0.38
CXCL12-206ENST00000395795 STK25O00506 426 aa17.44■□□□□ 0.38
CXCL12-206ENST00000395795 HCRTO43612 131 aa17.44■□□□□ 0.38
CXCL12-206ENST00000395795 LDHAP00338 332 aaKnown RBP17.44■□□□□ 0.38
CXCL12-206ENST00000395795 ITGB3P05106 788 aa17.44■□□□□ 0.38
CXCL12-206ENST00000395795 HAPLN1P10915 354 aaPredicted RBP17.44■□□□□ 0.38
CXCL12-206ENST00000395795 EPHB3P54753 998 aa17.44■□□□□ 0.38
CXCL12-206ENST00000395795 PFKPQ01813 784 aa17.44■□□□□ 0.38
CXCL12-206ENST00000395795 LMBRD2Q68DH5 695 aaPredicted RBP17.44■□□□□ 0.38
CXCL12-206ENST00000395795 SYCP3Q8IZU3 236 aa17.44■□□□□ 0.38
CXCL12-206ENST00000395795 GPD1LQ8N335 351 aa17.44■□□□□ 0.38
CXCL12-206ENST00000395795 ELMOD1Q8N336 334 aa17.44■□□□□ 0.38
CXCL12-206ENST00000395795 SCFD1Q8WVM8 642 aa17.44■□□□□ 0.38
CXCL12-206ENST00000395795 SHDQ96IW2 340 aa17.44■□□□□ 0.38
CXCL12-206ENST00000395795 MTMR12Q9C0I1 747 aa17.44■□□□□ 0.38
CXCL12-206ENST00000395795 TRPV5Q9NQA5 729 aa17.44■□□□□ 0.38
CXCL12-206ENST00000395795 GDAP2Q9NXN4 497 aa17.44■□□□□ 0.38
CXCL12-206ENST00000395795 RCOR1Q9UKL0 485 aa17.44■□□□□ 0.38
CXCL12-206ENST00000395795 AGAP1Q9UPQ3 857 aa17.44■□□□□ 0.38
CXCL12-206ENST00000395795 PTPRZ1P23471 2315 aaPredicted RBP17.43■□□□□ 0.38
CXCL12-206ENST00000395795 FAM186AA6NE01 2351 aa17.43■□□□□ 0.38
CXCL12-206ENST00000395795 GABRDO14764 452 aa17.43■□□□□ 0.38
CXCL12-206ENST00000395795 EIF3DO15371 548 aaKnown RBP eCLIP17.43■□□□□ 0.38
CXCL12-206ENST00000395795 POLR2DO15514 142 aaKnown RBP17.43■□□□□ 0.38
CXCL12-206ENST00000395795 HMGA1P17096 107 aaKnown RBP17.43■□□□□ 0.38
CXCL12-206ENST00000395795 DNM1Q05193 864 aaKnown RBP17.43■□□□□ 0.38
CXCL12-206ENST00000395795 PLD1Q13393 1074 aa17.43■□□□□ 0.38
CXCL12-206ENST00000395795 SV2CQ496J9 727 aa17.43■□□□□ 0.38
CXCL12-206ENST00000395795 WDR44Q5JSH3 913 aa17.43■□□□□ 0.38
CXCL12-206ENST00000395795 ARMCX5Q6P1M9 558 aa17.43■□□□□ 0.38
CXCL12-206ENST00000395795 TPRG1Q6ZUI0 275 aa17.43■□□□□ 0.38
CXCL12-206ENST00000395795 C1orf210Q8IVY1 113 aa17.43■□□□□ 0.38
CXCL12-206ENST00000395795 HSCBQ8IWL3 235 aa17.43■□□□□ 0.38
CXCL12-206ENST00000395795 LRRC52Q8N7C0 313 aa17.43■□□□□ 0.38
CXCL12-206ENST00000395795 IQUBQ8NA54 791 aa17.43■□□□□ 0.38
CXCL12-206ENST00000395795 DNASE1L2Q92874 299 aa17.43■□□□□ 0.38
CXCL12-206ENST00000395795 INTS13Q9NVM9 706 aa17.43■□□□□ 0.38
CXCL12-206ENST00000395795 ASB3Q9Y575 518 aa17.43■□□□□ 0.38
CXCL12-206ENST00000395795 FANCMQ8IYD8 2048 aa17.43■□□□□ 0.38
CXCL12-206ENST00000395795 TCHHQ07283 1943 aa17.43■□□□□ 0.38
CXCL12-206ENST00000395795 PATJQ8NI35 1801 aa17.42■□□□□ 0.38
CXCL12-206ENST00000395795 FAM170BA6NMN3 283 aa17.42■□□□□ 0.38
CXCL12-206ENST00000395795 HEPACAM2A8MVW5 462 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms