RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 VIPR2P41587 438 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 STARD6P59095 220 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 FZD5Q13467 585 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 SNW1Q13573 536 aaKnown RBP9.57□□□□□ -0.88
ATG4A-205ENST00000394892 CUL4BQ13620 913 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 MYBPC2Q14324 1141 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 POSTNQ15063 836 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 GAREM2Q75VX8 874 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 LIMS2Q7Z4I7 341 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 GPIHBP1Q8IV16 184 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 HSCBQ8IWL3 235 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 MAML2Q8IZL2 1156 aaPredicted RBP9.57□□□□□ -0.88
ATG4A-205ENST00000394892 ZNF507Q8TCN5 953 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 PLEKHO2Q8TD55 490 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 SCFD1Q8WVM8 642 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 SHDQ96IW2 340 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 ASB16Q96NS5 453 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 PKMYT1Q99640 499 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 PYM1Q9BRP8 204 aaKnown RBP9.57□□□□□ -0.88
ATG4A-205ENST00000394892 IL21Q9HBE4 155 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 ARHGEF3Q9NR81 526 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 GDE1Q9NZC3 331 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 L1RE1Q9UN81 338 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 NME7Q9Y5B8 376 aa9.57□□□□□ -0.88
ATG4A-205ENST00000394892 KPNA7A9QM74 516 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 XPOTO43592 962 aaKnown RBP9.56□□□□□ -0.88
ATG4A-205ENST00000394892 MICAL2O94851 1124 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 IL18RAPO95256 599 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 ITGB3P05106 788 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 MYL4P12829 197 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 SDHBP21912 280 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 ABCD1P33897 745 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 GPR15P49685 360 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 TAF6P49848 677 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 ASIC1P78348 528 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 TFAMQ00059 246 aaKnown RBP9.56□□□□□ -0.88
ATG4A-205ENST00000394892 GRM2Q14416 872 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 PUM1Q14671 1186 aaKnown RBP eCLIP9.56□□□□□ -0.88
ATG4A-205ENST00000394892 TEAD2Q15562 447 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 SLC44A4Q53GD3 710 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 WDR44Q5JSH3 913 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 PHLDB3Q6NSJ2 640 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 VITQ6UXI7 678 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 DNAJB7Q7Z6W7 309 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-205ENST00000394892 USP37Q86T82 979 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 TMEM150AQ86TG1 271 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 CCDC65Q8IXS2 484 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 KIAA2013Q8IYS2 634 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 PDCL2Q8N4E4 241 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 STKLD1Q8NE28 680 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 RUBCNQ92622 972 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 LPIN3Q9BQK8 851 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 MTMR12Q9C0I1 747 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 RBAKQ9NYW8 714 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-205ENST00000394892 SERTAD1Q9UHV2 236 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 MAFFQ9ULX9 164 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 AGAP1Q9UPQ3 857 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 R4GN57 208 aa9.56□□□□□ -0.88
ATG4A-205ENST00000394892 MTCL1Q9Y4B5 1905 aaKnown RBP9.55□□□□□ -0.88
ATG4A-205ENST00000394892 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.55□□□□□ -0.88
ATG4A-205ENST00000394892 A0A1W2PRU2 124 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 ARNTLO00327 626 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 CLIC2O15247 247 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 ODC1P11926 461 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 HMGA1P17096 107 aaKnown RBP9.55□□□□□ -0.88
ATG4A-205ENST00000394892 AFMP43652 599 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 ALCAMQ13740 583 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 SLC39A12Q504Y0 691 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 FAM26FQ5R3K3 315 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 UNC13DQ70J99 1090 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 MTSS1LQ765P7 747 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 PDZD4Q76G19 769 aaPredicted RBP9.55□□□□□ -0.88
ATG4A-205ENST00000394892 C1orf210Q8IVY1 113 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 NELFCDQ8IXH7 590 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 SYCP3Q8IZU3 236 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 GPD1LQ8N335 351 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 IQUBQ8NA54 791 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 RIN3Q8TB24 985 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 LEO1Q8WVC0 666 aaPredicted RBP9.55□□□□□ -0.88
ATG4A-205ENST00000394892 ZNF516Q92618 1163 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 SECISBP2LQ93073 1101 aaKnown RBP9.55□□□□□ -0.88
ATG4A-205ENST00000394892 ELSPBP1Q96BH3 223 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 RMDN1Q96DB5 314 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 ZNF512Q96ME7 567 aaPredicted RBP9.55□□□□□ -0.88
ATG4A-205ENST00000394892 CUEDC2Q9H467 287 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 TRPV4Q9HBA0 871 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 AGPAT3Q9NRZ7 376 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 INTS13Q9NVM9 706 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 HSPBP1Q9NZL4 362 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 EXOC7Q9UPT5 735 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 HPSEQ9Y251 543 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.55□□□□□ -0.88
ATG4A-205ENST00000394892 VPS13AQ96RL7 3174 aa9.55□□□□□ -0.88
ATG4A-205ENST00000394892 GABRDO14764 452 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 EIF3DO15371 548 aaKnown RBP eCLIP9.54□□□□□ -0.88
ATG4A-205ENST00000394892 KINO60870 393 aaKnown RBP9.54□□□□□ -0.88
ATG4A-205ENST00000394892 ATP2C2O75185 946 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 CST3P01034 146 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-205ENST00000394892 SP9P0CG40 484 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 HAPLN1P10915 354 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms