RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 PI4K2BG5E9Z4 385 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 LIASO43766 372 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 EXTL3O43909 919 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 UNC5CO95185 931 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 VNN1O95497 513 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 ZSCAN5DPP0CG00 497 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 KRT10P13645 584 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 PSMD6Q15008 389 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 MAP1SQ66K74 1059 aaPredicted RBP19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 TRIM72Q6ZMU5 477 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 DENND1AQ8TEH3 1009 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 APOBEC3GQ9HC16 384 aaKnown RBP19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 PDLIM7Q9NR12 457 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 DNPEPQ9ULA0 475 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 COL11A1P12107 1806 aaPredicted RBP19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 TLR3O15455 904 aaKnown RBP19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 MAGEB2O15479 319 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 TCF4P15884 667 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 TNNI1P19237 187 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 NFX1Q12986 1120 aaKnown RBP19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 CRYMQ14894 314 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 FASTKD3Q14CZ7 662 aaKnown RBP19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 CEP128Q6ZU80 1094 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 ERICH1Q86X53 443 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 PHF13Q86YI8 300 aaPredicted RBP19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 RDM1Q8NG50 284 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 SPOCK2Q92563 424 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 VCPIP1Q96JH7 1222 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 MYLK2Q9H1R3 596 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 KIF9Q9HAQ2 790 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 KIAA1586Q9HCI6 787 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 ARHGAP28Q9P2N2 729 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 STARD13Q9Y3M8 1113 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 TELO2Q9Y4R8 837 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 PCDHB4Q9Y5E5 795 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 NFASCO94856 1347 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 ETS1P14921 441 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 GNA15P30679 374 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 NLRP11P59045 1033 aaKnown RBP19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 DNAJC3Q13217 504 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 KAZNQ674X7 775 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 KIRREL3Q8IZU9 778 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 FNBP1Q96RU3 617 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 ELP3Q9H9T3 547 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 GRID1Q9ULK0 1009 aa19.39■□□□□ 0.69
PCDHA1-202ENST00000394633 POC1B-GALNT4F8VUJ3 575 aa19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 PRPF4O43172 522 aaKnown RBP eCLIP19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 POLGP54098 1239 aaPredicted RBP19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 LACTBP83111 547 aaPredicted RBP19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 LMNB2Q03252 620 aa19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 NR1H3Q13133 447 aa19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 CUL2Q13617 745 aa19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 PKN2Q16513 984 aaKnown RBP19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 CCDC142Q17RM4 750 aa19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 HP1BP3Q5SSJ5 553 aaPredicted RBP19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 ARHGEF16Q5VV41 709 aa19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 TMEM270Q6UE05 265 aa19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 TDRPQ86YL5 185 aa19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 MAB21L3Q8N8X9 362 aa19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 FEZF2Q8TBJ5 459 aa19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 FBF1Q8TES7 1133 aa19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 UTP4Q969X6 686 aaKnown RBP19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 ATG4CQ96DT6 458 aa19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 SENP7Q9BQF6 1050 aa19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 TRABDQ9H4I3 376 aa19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 ETNK1Q9HBU6 452 aa19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 UBN1Q9NPG3 1134 aa19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 PHTF1Q9UMS5 762 aa19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 SCINQ9Y6U3 715 aa19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 SIP14410 1827 aa19.38■□□□□ 0.69
PCDHA1-202ENST00000394633 KIF1CO43896 1103 aaKnown RBP19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 DIAPH2O60879 1101 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 PECAM1P16284 738 aaPredicted RBP19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 ACOT2P49753 483 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 SLC8A3P57103 927 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 NLRX1Q86UT6 975 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 DHX37Q8IY37 1157 aaKnown RBP19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 C12orf42Q96LP6 360 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 ZNF570Q96NI8 536 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 SLITRK1Q96PX8 696 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 CLEC11AQ9Y240 323 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 CSADQ9Y600 493 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 LIG4P49917 911 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 ARSEP51690 589 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 RTP1P59025 263 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 RPL7AP62424 266 aaKnown RBP19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 C1QBPQ07021 282 aaKnown RBP19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 MOGSQ13724 837 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 TTLL12Q14166 644 aaPredicted RBP19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 NAA25Q14CX7 972 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 MFSD7Q6UXD7 560 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 RCOR2Q8IZ40 523 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 MCPH1Q8NEM0 835 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 TTC25Q96NG3 672 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 POLR3FQ9H1D9 316 aaPredicted RBP19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 SLCO1B3Q9NPD5 702 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 TXLNGQ9NUQ3 528 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 ZNF148Q9UQR1 794 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 CHKBQ9Y259 395 aa19.37■□□□□ 0.69
PCDHA1-202ENST00000394633 SOCS7O14512 581 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms