RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 LINGO3P0C6S8 592 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 GHRP10912 638 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 ABL2P42684 1182 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 FSTL1Q12841 308 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 MED21Q13503 144 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 BRDTQ58F21 947 aaPredicted RBP9.28□□□□□ -0.92
RTN4-206ENST00000394611 DACT2Q5SW24 774 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 ANO7Q6IWH7 933 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 SLF2Q8IX21 1173 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 DNAJC19Q96DA6 116 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 OSBPL8Q9BZF1 889 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 CYP39A1Q9NYL5 469 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 ANGPTL2Q9UKU9 493 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 GOLGA8QA0A0J9YX86 632 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 GOLGA8OA6NCC3 632 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 A6NJR5 290 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 GOLGA8NF8WBI6 632 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 F7P08709 466 aaPredicted RBP9.28□□□□□ -0.92
RTN4-206ENST00000394611 SP100P23497 879 aaPredicted RBP9.28□□□□□ -0.92
RTN4-206ENST00000394611 PHBP35232 272 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 TRAF1Q13077 416 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 HIF1AQ16665 826 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 DUPD1Q68J44 220 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 PADI6Q6TGC4 694 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 LAYNQ6UX15 382 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.28□□□□□ -0.923e-7■□□□□ 8.1
RTN4-206ENST00000394611 FRMD5Q7Z6J6 570 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 ICA1LQ8NDH6 482 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 GRIP2Q9C0E4 1043 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 VPS11Q9H270 941 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 ZNF395Q9H8N7 513 aaPredicted RBP9.28□□□□□ -0.92
RTN4-206ENST00000394611 SLC5A4Q9NY91 659 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 AIPL1Q9NZN9 384 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 DOLKQ9UPQ8 538 aa9.28□□□□□ -0.92
RTN4-206ENST00000394611 TDRKHQ9Y2W6 561 aaKnown RBP9.28□□□□□ -0.92
RTN4-206ENST00000394611 H0YGN5 161 aa9.27□□□□□ -0.92
RTN4-206ENST00000394611 GH2P01242 217 aa9.27□□□□□ -0.92
RTN4-206ENST00000394611 LIG4P49917 911 aa9.27□□□□□ -0.92
RTN4-206ENST00000394611 NLRP11P59045 1033 aaKnown RBP9.27□□□□□ -0.92
RTN4-206ENST00000394611 SLC25A3Q00325 362 aa9.27□□□□□ -0.92
RTN4-206ENST00000394611 ALCAMQ13740 583 aa9.27□□□□□ -0.92
RTN4-206ENST00000394611 SLC1A5Q15758 541 aa9.27□□□□□ -0.92
RTN4-206ENST00000394611 MAP7D1Q3KQU3 841 aa9.27□□□□□ -0.92
RTN4-206ENST00000394611 PDIK1LQ8N165 341 aa9.27□□□□□ -0.92
RTN4-206ENST00000394611 ARL8BQ9NVJ2 186 aa9.27□□□□□ -0.92
RTN4-206ENST00000394611 NFS1Q9Y697 457 aa9.27□□□□□ -0.92
RTN4-206ENST00000394611 PALM3A6NDB9 673 aaPredicted RBP9.27□□□□□ -0.93
RTN4-206ENST00000394611 FZD9O00144 591 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 EML1O00423 815 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 FGFR3P22607 806 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 TFAMQ00059 246 aaKnown RBP9.27□□□□□ -0.93
RTN4-206ENST00000394611 STRIP1Q5VSL9 837 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 DNAJC24Q6P3W2 148 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 NUDCD3Q8IVD9 361 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 ZNF384Q8TF68 577 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 HAS1Q92839 578 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 PGBD4Q96DM1 585 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 MCEEQ96PE7 176 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 ZNF317Q96PQ6 595 aaPredicted RBP9.27□□□□□ -0.93
RTN4-206ENST00000394611 NGRNQ9NPE2 291 aaKnown RBP9.27□□□□□ -0.93
RTN4-206ENST00000394611 SLC17A7Q9P2U7 560 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 KIF3CO14782 793 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 APRTP07741 180 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 GSTA1P08263 222 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 ENO3P13929 434 aaPredicted RBP9.27□□□□□ -0.93
RTN4-206ENST00000394611 FECHP22830 423 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 TPP2P29144 1249 aaPredicted RBP9.27□□□□□ -0.93
RTN4-206ENST00000394611 ECHS1P30084 290 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 CASP2P42575 452 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 BLMHQ13867 455 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 CHI3L2Q15782 390 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 ASPRV1Q53RT3 343 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 CIAPIN1Q6FI81 312 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 KRT80Q6KB66 452 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 DCLRE1BQ9H816 532 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 MANSC1Q9H8J5 431 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 CHKBQ9Y259 395 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 MYH7BA7E2Y1 1941 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 MAP3K13O43283 966 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 AMPD1P23109 780 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 TPD52P55327 224 aaPredicted RBP9.27□□□□□ -0.93
RTN4-206ENST00000394611 AP2B1P63010 937 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 KLRC3Q07444 240 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 TRPC3Q13507 836 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 NOP9Q86U38 636 aaKnown RBP9.27□□□□□ -0.93
RTN4-206ENST00000394611 FAM71DQ8N9W8 422 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 XXYLT1Q8NBI6 393 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 ATL2Q8NHH9 583 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 USP13Q92995 863 aaPredicted RBP9.27□□□□□ -0.93
RTN4-206ENST00000394611 PGM2Q96G03 612 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 PRR11Q96HE9 360 aaPredicted RBP9.27□□□□□ -0.93
RTN4-206ENST00000394611 AGPAT3Q9NRZ7 376 aa9.27□□□□□ -0.93
RTN4-206ENST00000394611 CORO1CQ9ULV4 474 aaPredicted RBP9.27□□□□□ -0.93
RTN4-206ENST00000394611 PCNTO95613 3336 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 PYGBP11216 843 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 GALK1P51570 392 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 RPS6KA3P51812 740 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 AQP5P55064 265 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 RASA2Q15283 850 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 EPHA7Q15375 998 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms