RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 MAGEA8P43361 318 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 CASP4P49662 377 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 FCGRTP55899 365 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 INHBEP58166 350 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 RCN1Q15293 331 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 HADHQ16836 314 aaKnown RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 ZNF699Q32M78 642 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 KLHDC7AQ5VTJ3 777 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 ARMCX2Q7L311 632 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 RASSF3Q86WH2 238 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 SPIRE2Q8WWL2 714 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 SYN2Q92777 582 aaPredicted RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 SHISA4Q96DD7 197 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 FAM161BQ96MY7 647 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 MBOAT7Q96N66 472 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 FAM193BQ96PV7 902 aaPredicted RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 SNX25Q9H3E2 840 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 DCLRE1BQ9H816 532 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 XAB2Q9HCS7 855 aaKnown RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 RAB20Q9NX57 234 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 NUB1Q9Y5A7 615 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 SRRM3A6NNA2 597 aaPredicted RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 PDE2AO00408 941 aaPredicted RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 AKAP3O75969 853 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 GARTP22102 1010 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 CALB2P22676 271 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 ANXA13P27216 316 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 GPC5P78333 572 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 ITGB3BPQ13352 177 aaPredicted RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 RIPK1Q13546 671 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 PSMD6Q15008 389 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 COBLL1Q53SF7 1204 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 MAP3K21Q5TCX8 1036 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 TRIM59Q8IWR1 403 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 SRRM1Q8IYB3 904 aaKnown RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 ATP8B4Q8TF62 1192 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 WNK4Q96J92 1243 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 TRAPPC9Q96Q05 1148 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.99□□□□□ -1.452e-7■■■□□ 18.7
RFFL-202ENST00000394597 MED10Q9BTT4 135 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 TMEM8AQ9HCN3 771 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 INTS13Q9NVM9 706 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 DNAAF2Q9NVR5 837 aaKnown RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 UTP6Q9NYH9 597 aaKnown RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 POC1B-GALNT4F8VUJ3 575 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 CAPN9O14815 690 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 HNRNPRO43390 633 aaKnown RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 ABL1P00519 1130 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 AGTP01019 485 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 FGGP02679 453 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 HSPA9P38646 679 aaKnown RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 CPT1AP50416 773 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 ESRRGP62508 458 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 MRPS9P82933 396 aaKnown RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 QPCTQ16769 361 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 LRRC36Q1X8D7 754 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 SH3D19Q5HYK7 790 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 ATF7IP2Q5U623 682 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 LMBRD2Q68DH5 695 aaPredicted RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 TWF2Q6IBS0 349 aaKnown RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 CHADLQ6NUI6 762 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 TMEM270Q6UE05 265 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 SCARA5Q6ZMJ2 495 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 CAPN12Q6ZSI9 719 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 RBBP8NLQ8NC74 664 aaPredicted RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 SHCBP1Q8NEM2 672 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 BEST2Q8NFU1 509 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 RAET1EQ8TD07 263 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 C17orf50Q8WW18 174 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 CASP10Q92851 521 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 GRAMD1AQ96CP6 724 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 HEXIM2Q96MH2 286 aaKnown RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 ACAP3Q96P50 834 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 INPP4AQ96PE3 977 aaPredicted RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 FAM192AQ9GZU8 254 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 DRC3Q9H069 523 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 ISCUQ9H1K1 167 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 ABHD16BQ9H3Z7 469 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 PFDN4Q9NQP4 134 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 ABCF3Q9NUQ8 709 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 PLAGL2Q9UPG8 496 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 PCDHGC5Q9Y5F6 944 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 CAPN6Q9Y6Q1 641 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 COL2A1P02458 1487 aaPredicted RBP5.99□□□□□ -1.45
RFFL-202ENST00000394597 PASKQ96RG2 1323 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 IGLV3-22A0A075B6J6 115 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 A0A0G2JND7 137 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 CFAP69A5D8W1 941 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 CYP2C9P11712 490 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 CA4P22748 312 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 TARSP26639 723 aaKnown RBP5.98□□□□□ -1.45
RFFL-202ENST00000394597 MLH1P40692 756 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 HIRAP54198 1017 aaPredicted RBP5.98□□□□□ -1.45
RFFL-202ENST00000394597 ADARP55265 1226 aaKnown RBP5.98□□□□□ -1.45
RFFL-202ENST00000394597 AP2B1P63010 937 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 TMED2Q15363 201 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 SLC18A3Q16572 532 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 P3H1Q32P28 736 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms