RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TMED2Q15363 201 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 FAM47EQ6ZV65 393 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 CEP57Q86XR8 500 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 TRIM50Q86XT4 487 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 SGSM3Q96HU1 749 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 RMDN2Q96LZ7 410 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 RUNDC3BQ96NL0 473 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 RBPJLQ9UBG7 517 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 CNTNAP2Q9UHC6 1331 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 A8MUI8 341 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 CLTAP09496 248 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 KLRC2P26717 231 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 GCAP28676 217 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 GBP1P32455 592 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 TCF7P36402 384 aaPredicted RBP14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 NRLP54845 237 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 MGAT5Q09328 741 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 PLCB4Q15147 1175 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 ZNF365Q70YC5 407 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 SLC7A3Q8WY07 619 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 MCEEQ96PE7 176 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 PAIP2Q9BPZ3 127 aaKnown RBP14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 AGTPBP1Q9UPW5 1226 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 K7ERI5 159 aa14.27□□□□□ -0.12
GTF2F1-201ENST00000394456 GAS8O95995 478 aa14.27□□□□□ -0.12
GTF2F1-201ENST00000394456 OAS1P00973 400 aaKnown RBP14.27□□□□□ -0.12
GTF2F1-201ENST00000394456 GJB1P08034 283 aa14.27□□□□□ -0.12
GTF2F1-201ENST00000394456 WEE2P0C1S8 567 aa14.27□□□□□ -0.12
GTF2F1-201ENST00000394456 CLDN10P78369 228 aa14.27□□□□□ -0.12
GTF2F1-201ENST00000394456 STRN3Q13033 797 aa14.27□□□□□ -0.12
GTF2F1-201ENST00000394456 XRCC4Q13426 336 aa14.27□□□□□ -0.12
GTF2F1-201ENST00000394456 RHOT1Q8IXI2 618 aa14.27□□□□□ -0.12
GTF2F1-201ENST00000394456 ANKLE1Q8NAG6 615 aa14.27□□□□□ -0.12
GTF2F1-201ENST00000394456 TBC1D31Q96DN5 1066 aa14.27□□□□□ -0.12
GTF2F1-201ENST00000394456 TRAIPQ9BWF2 469 aa14.27□□□□□ -0.12
GTF2F1-201ENST00000394456 DHX33Q9H6R0 707 aaKnown RBP14.27□□□□□ -0.12
GTF2F1-201ENST00000394456 SLC12A4Q9UP95 1085 aa14.27□□□□□ -0.12
GTF2F1-201ENST00000394456 STAT5BP51692 787 aa14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 RTP1P59025 263 aa14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 MYL6P60660 151 aa14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 OSTNP61366 133 aa14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 NFX1Q12986 1120 aaKnown RBP14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 NCOA4Q13772 614 aa14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 SWT1Q5T5J6 900 aaKnown RBP14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 PLEKHA7Q6IQ23 1121 aa14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 DPY19L2Q6NUT2 758 aa14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 TAOK1Q7L7X3 1001 aa14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 ARMC9Q7Z3E5 817 aa14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 PNMA8AQ86V59 439 aaPredicted RBP14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 DEPTORQ8TB45 409 aa14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 ZNF606Q8WXB4 792 aa14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 TFAP2BQ92481 460 aa14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 FGD4Q96M96 766 aa14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 SERPINB12Q96P63 405 aa14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 RBM15Q96T37 977 aaKnown RBP eCLIP14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 MTMR12Q9C0I1 747 aa14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 PORCNQ9H237 461 aa14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 CCDC134Q9H6E4 229 aa14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 SAYSD1Q9NPB0 183 aa14.27□□□□□ -0.13
GTF2F1-201ENST00000394456 CXCL11O14625 94 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 KRT1P04264 644 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 WDR4P57081 412 aaKnown RBP14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 DYNLT1P63172 113 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 MOGSQ13724 837 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 CAPSQ13938 189 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 SMTNL2Q2TAL5 461 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 FBXO16Q8IX29 292 aaPredicted RBP14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 PRCCQ92733 491 aaPredicted RBP14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 ROPN1BQ9BZX4 212 aaPredicted RBP14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 C12orf65Q9H3J6 166 aaKnown RBP14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 ROPN1Q9HAT0 212 aaPredicted RBP14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 IGKV6D-21A0A0A0MT36 114 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 POC1B-GALNT4F8VUJ3 575 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 SLC1A1P43005 524 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 HSDL1Q3SXM5 330 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 KCNT1Q5JUK3 1230 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 ENOSF1Q7L5Y1 443 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 WDTC1Q8N5D0 677 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 ANKS4BQ8N8V4 417 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 GPATCH11Q8N954 259 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 FEZF2Q8TBJ5 459 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 TMEM121Q9BTD3 319 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 PLVAPQ9BX97 442 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 HOMER3Q9NSC5 361 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 BAIAP2L1Q9UHR4 511 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 GRID1Q9ULK0 1009 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 KCNH4Q9UQ05 1017 aa14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.26□□□□□ -0.13
GTF2F1-201ENST00000394456 EVPLQ92817 2033 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 A0A0B4J269 797 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 SOCS7O14512 581 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 ZC3H11AO75152 810 aaKnown RBP eCLIP14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 DNAJC8O75937 253 aaPredicted RBP14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 CYP2C8P10632 490 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 PECAM1P16284 738 aaPredicted RBP14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 GJA5P36382 358 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 MAGEA4P43358 317 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 NCALDP61601 193 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 PPIL2Q13356 520 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms