RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.9■□□□□ 0.78
HOXC6-202ENST00000394331 AJAP1Q9UKB5 411 aaPredicted RBP19.9■□□□□ 0.78
HOXC6-202ENST00000394331 COL11A2P13942 1736 aaPredicted RBP19.9■□□□□ 0.78
HOXC6-202ENST00000394331 UBE4BO95155 1302 aa19.89■□□□□ 0.78
HOXC6-202ENST00000394331 A6NJR5 290 aa19.89■□□□□ 0.78
HOXC6-202ENST00000394331 SORBS3O60504 671 aa19.89■□□□□ 0.78
HOXC6-202ENST00000394331 SOX5P35711 763 aa19.89■□□□□ 0.78
HOXC6-202ENST00000394331 ADRM1Q16186 407 aa19.89■□□□□ 0.78
HOXC6-202ENST00000394331 B3GNT6Q6ZMB0 384 aa19.89■□□□□ 0.78
HOXC6-202ENST00000394331 ARHGEF26Q96DR7 871 aa19.89■□□□□ 0.78
HOXC6-202ENST00000394331 DYDC2Q96IM9 177 aa19.89■□□□□ 0.78
HOXC6-202ENST00000394331 WDR18Q9BV38 432 aa19.89■□□□□ 0.78
HOXC6-202ENST00000394331 TMOD2Q9NZR1 351 aa19.89■□□□□ 0.78
HOXC6-202ENST00000394331 ANKFY1Q9P2R3 1169 aa19.89■□□□□ 0.78
HOXC6-202ENST00000394331 COG5Q9UP83 839 aa19.89■□□□□ 0.78
HOXC6-202ENST00000394331 RBM47A0AV96 593 aaKnown RBP19.89■□□□□ 0.77
HOXC6-202ENST00000394331 MAN1A1P33908 653 aa19.89■□□□□ 0.77
HOXC6-202ENST00000394331 KCNA1Q09470 495 aa19.89■□□□□ 0.77
HOXC6-202ENST00000394331 CYLC2Q14093 348 aaPredicted RBP19.89■□□□□ 0.77
HOXC6-202ENST00000394331 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.89■□□□□ 0.77
HOXC6-202ENST00000394331 SPOCK2Q92563 424 aa19.89■□□□□ 0.77
HOXC6-202ENST00000394331 PRMT6Q96LA8 375 aaPredicted RBP19.89■□□□□ 0.77
HOXC6-202ENST00000394331 NDE1Q9NXR1 346 aa19.89■□□□□ 0.77
HOXC6-202ENST00000394331 KCND2Q9NZV8 630 aa19.89■□□□□ 0.77
HOXC6-202ENST00000394331 SFI1A8K8P3 1242 aa19.89■□□□□ 0.77
HOXC6-202ENST00000394331 SERPINB8P50452 374 aa19.89■□□□□ 0.77
HOXC6-202ENST00000394331 PRELPP51888 382 aa19.89■□□□□ 0.77
HOXC6-202ENST00000394331 THOC5Q13769 683 aaKnown RBP19.89■□□□□ 0.77
HOXC6-202ENST00000394331 PTK6Q13882 451 aa19.89■□□□□ 0.77
HOXC6-202ENST00000394331 TRMT5Q32P41 509 aaKnown RBP19.89■□□□□ 0.77
HOXC6-202ENST00000394331 AADACL2Q6P093 401 aa19.89■□□□□ 0.77
HOXC6-202ENST00000394331 GLYCTKQ8IVS8 523 aa19.89■□□□□ 0.77
HOXC6-202ENST00000394331 PDCD7Q8N8D1 485 aaKnown RBP19.89■□□□□ 0.77
HOXC6-202ENST00000394331 NACC1Q96RE7 527 aa19.89■□□□□ 0.77
HOXC6-202ENST00000394331 ARL8BQ9NVJ2 186 aa19.89■□□□□ 0.77
HOXC6-202ENST00000394331 TMX2Q9Y320 296 aa19.89■□□□□ 0.77
HOXC6-202ENST00000394331 RARBP10826 455 aa19.88■□□□□ 0.77
HOXC6-202ENST00000394331 AP2B1P63010 937 aa19.88■□□□□ 0.77
HOXC6-202ENST00000394331 CHURC1Q8WUH1 139 aa19.88■□□□□ 0.77
HOXC6-202ENST00000394331 WDR11Q9BZH6 1224 aa19.88■□□□□ 0.77
HOXC6-202ENST00000394331 SSU72Q9NP77 194 aaKnown RBP19.88■□□□□ 0.77
HOXC6-202ENST00000394331 BARX2Q9UMQ3 279 aaPredicted RBP19.88■□□□□ 0.77
HOXC6-202ENST00000394331 GAS7O60861 476 aa19.88■□□□□ 0.77
HOXC6-202ENST00000394331 NMT1P30419 496 aaKnown RBP19.88■□□□□ 0.77
HOXC6-202ENST00000394331 AOC3Q16853 763 aa19.88■□□□□ 0.77
HOXC6-202ENST00000394331 KRT35Q92764 455 aa19.88■□□□□ 0.77
HOXC6-202ENST00000394331 TRAIPQ9BWF2 469 aa19.88■□□□□ 0.77
HOXC6-202ENST00000394331 TAS2R1Q9NYW7 299 aa19.88■□□□□ 0.77
HOXC6-202ENST00000394331 MRPL11Q9Y3B7 192 aaKnown RBP19.88■□□□□ 0.77
HOXC6-202ENST00000394331 CHMP2AO43633 222 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 HNRNPCP07910 306 aaKnown RBP eCLIP19.87■□□□□ 0.77
HOXC6-202ENST00000394331 IVDP26440 423 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 ADARP55265 1226 aaKnown RBP19.87■□□□□ 0.77
HOXC6-202ENST00000394331 TNIP1Q15025 636 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.87■□□□□ 0.77
HOXC6-202ENST00000394331 CFAP157Q5JU67 520 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 BCAS3Q9H6U6 928 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 ZNF219Q9P2Y4 722 aaPredicted RBP19.87■□□□□ 0.77
HOXC6-202ENST00000394331 GRID1Q9ULK0 1009 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 PTPN22Q9Y2R2 807 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 MTA2O94776 668 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 GRIA2P42262 883 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 ECE1P42892 770 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 PLOD1Q02809 727 aaPredicted RBP19.87■□□□□ 0.77
HOXC6-202ENST00000394331 KRT17Q04695 432 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 CEP55Q53EZ4 464 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 SCYL3Q8IZE3 742 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 CD101Q93033 1021 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 SKA1Q96BD8 255 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 STK33Q9BYT3 514 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 OSBPL8Q9BZF1 889 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 THAP2Q9H0W7 228 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 KANSL3Q9P2N6 904 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 TBK1Q9UHD2 729 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 NUMBLQ9Y6R0 609 aa19.87■□□□□ 0.77
HOXC6-202ENST00000394331 ZNF189O75820 626 aaPredicted RBP19.86■□□□□ 0.77
HOXC6-202ENST00000394331 PSMD7P51665 324 aa19.86■□□□□ 0.77
HOXC6-202ENST00000394331 BTG3Q14201 252 aaPredicted RBP19.86■□□□□ 0.77
HOXC6-202ENST00000394331 P3H1Q32P28 736 aa19.86■□□□□ 0.77
HOXC6-202ENST00000394331 TMCO4Q5TGY1 634 aa19.86■□□□□ 0.77
HOXC6-202ENST00000394331 ZNF720Q7Z2F6 126 aa19.86■□□□□ 0.77
HOXC6-202ENST00000394331 FAM178BQ8IXR5 827 aa19.86■□□□□ 0.77
HOXC6-202ENST00000394331 LARGE2Q8N3Y3 721 aa19.86■□□□□ 0.77
HOXC6-202ENST00000394331 FOXP3Q9BZS1 431 aa19.86■□□□□ 0.77
HOXC6-202ENST00000394331 PPCSQ9HAB8 311 aa19.86■□□□□ 0.77
HOXC6-202ENST00000394331 FRMD4BQ9Y2L6 1034 aa19.86■□□□□ 0.77
HOXC6-202ENST00000394331 BCRP11274 1271 aa19.86■□□□□ 0.77
HOXC6-202ENST00000394331 ZNF24P17028 368 aa19.86■□□□□ 0.77
HOXC6-202ENST00000394331 ABCB4P21439 1286 aa19.86■□□□□ 0.77
HOXC6-202ENST00000394331 ASPHQ12797 758 aa19.86■□□□□ 0.77
HOXC6-202ENST00000394331 RASA2Q15283 850 aa19.86■□□□□ 0.77
HOXC6-202ENST00000394331 DUS1LQ6P1R4 473 aaKnown RBP19.86■□□□□ 0.77
HOXC6-202ENST00000394331 PDSS2Q86YH6 399 aa19.86■□□□□ 0.77
HOXC6-202ENST00000394331 ZNF75CPQ92670 426 aaPredicted RBP19.86■□□□□ 0.77
HOXC6-202ENST00000394331 RANBP17Q9H2T7 1088 aaKnown RBP19.86■□□□□ 0.77
HOXC6-202ENST00000394331 SCN9AQ15858 1988 aa19.86■□□□□ 0.77
HOXC6-202ENST00000394331 BUD23O43709 281 aaKnown RBP19.86■□□□□ 0.77
HOXC6-202ENST00000394331 HSPA1LP34931 641 aa19.86■□□□□ 0.77
HOXC6-202ENST00000394331 FMO5P49326 533 aa19.86■□□□□ 0.77
HOXC6-202ENST00000394331 PLEKHG4Q58EX7 1191 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms