RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 PGRMC1O00264 195 aaKnown RBP20.25■□□□□ 0.83
CLDND1-203ENST00000394181 SPOPO43791 374 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 FGGP02679 453 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 MYBL2P10244 700 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 NDST1P52848 882 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 TNNC1P63316 161 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 PTGISQ16647 500 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 CYP4A22Q5TCH4 519 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 C9orf57Q5W0N0 161 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 DPH6Q7L8W6 267 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 RAET1EQ8TD07 263 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 RNPC3Q96LT9 517 aaKnown RBP20.25■□□□□ 0.83
CLDND1-203ENST00000394181 CYP3A43Q9HB55 503 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 DDX20Q9UHI6 824 aaKnown RBP20.25■□□□□ 0.83
CLDND1-203ENST00000394181 SNX9Q9Y5X1 595 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 SCN1AP35498 2009 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 TARSL2A2RTX5 802 aaKnown RBP20.24■□□□□ 0.83
CLDND1-203ENST00000394181 RPS6KA5O75582 802 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 SASH3O75995 380 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 IGFBP6P24592 240 aaPredicted RBP20.24■□□□□ 0.83
CLDND1-203ENST00000394181 THPOP40225 353 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 RPL7AP62424 266 aaKnown RBP20.24■□□□□ 0.83
CLDND1-203ENST00000394181 PTPN11Q06124 597 aaPredicted RBP20.24■□□□□ 0.83
CLDND1-203ENST00000394181 C1QBPQ07021 282 aaKnown RBP20.24■□□□□ 0.83
CLDND1-203ENST00000394181 BEND6Q5SZJ8 279 aaPredicted RBP20.24■□□□□ 0.83
CLDND1-203ENST00000394181 LIN9Q5TKA1 542 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 PLEKHA7Q6IQ23 1121 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 TMEM35BQ8NCS4 154 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 BEST2Q8NFU1 509 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 ZBTB9Q96C00 473 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 TRIM11Q96F44 468 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 CALR3Q96L12 384 aaKnown RBP20.24■□□□□ 0.83
CLDND1-203ENST00000394181 HEXIM2Q96MH2 286 aaKnown RBP20.24■□□□□ 0.83
CLDND1-203ENST00000394181 ZFP42Q96MM3 310 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 ARFGAP3Q9NP61 516 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 ZSCAN5CA6NGD5 496 aaPredicted RBP20.24■□□□□ 0.83
CLDND1-203ENST00000394181 M0QZ92 97 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 SPTLC1O15269 473 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 STAU1O95793 577 aaKnown RBP20.24■□□□□ 0.83
CLDND1-203ENST00000394181 PYGMP11217 842 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 AFF1P51825 1210 aaKnown RBP20.24■□□□□ 0.83
CLDND1-203ENST00000394181 MGAT3Q09327 533 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 LONRF2Q1L5Z9 754 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 XKR4Q5GH76 650 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 C12orf29Q8N999 325 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 FAXDC2Q96IV6 333 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 VCPIP1Q96JH7 1222 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 BARX2Q9UMQ3 279 aaPredicted RBP20.24■□□□□ 0.83
CLDND1-203ENST00000394181 CASP8AP2Q9UKL3 1982 aa20.24■□□□□ 0.83
CLDND1-203ENST00000394181 KRIT1O00522 736 aa20.23■□□□□ 0.83
CLDND1-203ENST00000394181 HCRTO43612 131 aa20.23■□□□□ 0.83
CLDND1-203ENST00000394181 LSM8O95777 96 aaKnown RBP20.23■□□□□ 0.83
CLDND1-203ENST00000394181 GLI1P08151 1106 aa20.23■□□□□ 0.83
CLDND1-203ENST00000394181 PAEPP09466 180 aa20.23■□□□□ 0.83
CLDND1-203ENST00000394181 P4HA1P13674 534 aa20.23■□□□□ 0.83
CLDND1-203ENST00000394181 CYP3A5P20815 502 aa20.23■□□□□ 0.83
CLDND1-203ENST00000394181 CDH5P33151 784 aaPredicted RBP20.23■□□□□ 0.83
CLDND1-203ENST00000394181 MYO1EQ12965 1108 aa20.23■□□□□ 0.83
CLDND1-203ENST00000394181 LLGL1Q15334 1064 aa20.23■□□□□ 0.83
CLDND1-203ENST00000394181 C8orf74Q6P047 294 aa20.23■□□□□ 0.83
CLDND1-203ENST00000394181 LPIN3Q9BQK8 851 aa20.23■□□□□ 0.83
CLDND1-203ENST00000394181 CARD9Q9H257 536 aa20.23■□□□□ 0.83
CLDND1-203ENST00000394181 CACNG4Q9UBN1 327 aa20.23■□□□□ 0.83
CLDND1-203ENST00000394181 MIF4GDA9UHW6 222 aaKnown RBP20.22■□□□□ 0.83
CLDND1-203ENST00000394181 MYO1FO00160 1098 aa20.22■□□□□ 0.83
CLDND1-203ENST00000394181 O00370 1275 aa20.22■□□□□ 0.83
CLDND1-203ENST00000394181 CST5P28325 142 aaPredicted RBP20.22■□□□□ 0.83
CLDND1-203ENST00000394181 HOXD10P28358 340 aa20.22■□□□□ 0.83
CLDND1-203ENST00000394181 INCA1Q0VD86 236 aa20.22■□□□□ 0.83
CLDND1-203ENST00000394181 ITGA7Q13683 1181 aa20.22■□□□□ 0.83
CLDND1-203ENST00000394181 RSPH3Q86UC2 560 aa20.22■□□□□ 0.83
CLDND1-203ENST00000394181 WNT8AQ9H1J5 351 aa20.22■□□□□ 0.83
CLDND1-203ENST00000394181 THSD7BQ9C0I4 1608 aa20.22■□□□□ 0.83
CLDND1-203ENST00000394181 TCRBV5S1A1TA0A578 114 aa20.22■□□□□ 0.83
CLDND1-203ENST00000394181 MICAL2O94851 1124 aa20.22■□□□□ 0.83
CLDND1-203ENST00000394181 KCNE1P15382 129 aa20.22■□□□□ 0.83
CLDND1-203ENST00000394181 CTNNA1P35221 906 aaKnown RBP20.22■□□□□ 0.83
CLDND1-203ENST00000394181 TRADDQ15628 312 aa20.22■□□□□ 0.83
CLDND1-203ENST00000394181 PTPN20Q4JDL3 420 aa20.22■□□□□ 0.83
CLDND1-203ENST00000394181 UBL4BQ8N7F7 174 aa20.22■□□□□ 0.83
CLDND1-203ENST00000394181 UBA3Q8TBC4 463 aa20.22■□□□□ 0.83
CLDND1-203ENST00000394181 LPPQ93052 612 aa20.22■□□□□ 0.83
CLDND1-203ENST00000394181 DDX47Q9H0S4 455 aaKnown RBP20.22■□□□□ 0.83
CLDND1-203ENST00000394181 UBQLN1Q9UMX0 589 aaKnown RBP20.22■□□□□ 0.83
CLDND1-203ENST00000394181 PCDHA3Q9Y5H8 950 aa20.22■□□□□ 0.83
CLDND1-203ENST00000394181 PIRO00625 290 aa20.21■□□□□ 0.83
CLDND1-203ENST00000394181 PTGESO14684 152 aa20.21■□□□□ 0.83
CLDND1-203ENST00000394181 TLR3O15455 904 aaKnown RBP20.21■□□□□ 0.83
CLDND1-203ENST00000394181 RAD51CO43502 376 aa20.21■□□□□ 0.83
CLDND1-203ENST00000394181 ACLYP53396 1101 aa20.21■□□□□ 0.83
CLDND1-203ENST00000394181 ZNF618Q5T7W0 954 aa20.21■□□□□ 0.83
CLDND1-203ENST00000394181 CCNI2Q6ZMN8 369 aaPredicted RBP20.21■□□□□ 0.83
CLDND1-203ENST00000394181 ERICH1Q86X53 443 aa20.21■□□□□ 0.83
CLDND1-203ENST00000394181 ZDHHC14Q8IZN3 488 aa20.21■□□□□ 0.83
CLDND1-203ENST00000394181 HNRNPLLQ8WVV9 542 aaKnown RBP20.21■□□□□ 0.83
CLDND1-203ENST00000394181 TTC7AQ9ULT0 858 aaPredicted RBP20.21■□□□□ 0.83
CLDND1-203ENST00000394181 CD52P31358 61 aa20.21■□□□□ 0.83
CLDND1-203ENST00000394181 SOWAHAQ2M3V2 549 aa20.21■□□□□ 0.83
CLDND1-203ENST00000394181 PCSK9Q8NBP7 692 aaKnown RBP20.21■□□□□ 0.83
CLDND1-203ENST00000394181 FEZF2Q8TBJ5 459 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms