RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 ZCWPW1Q9H0M4 648 aa33.09■■■□□ 2.89
CMTM4-202ENST00000394106 CRISPLD1Q9H336 500 aa33.09■■■□□ 2.89
CMTM4-202ENST00000394106 SLC27A5Q9Y2P5 690 aa33.09■■■□□ 2.89
CMTM4-202ENST00000394106 RHOBTB3O94955 611 aa33.08■■■□□ 2.89
CMTM4-202ENST00000394106 SLC5A9Q2M3M2 681 aa33.08■■■□□ 2.89
CMTM4-202ENST00000394106 IQCEQ6IPM2 695 aa33.08■■■□□ 2.89
CMTM4-202ENST00000394106 CENPPQ6IPU0 288 aa33.08■■■□□ 2.89
CMTM4-202ENST00000394106 PDCL2Q8N4E4 241 aa33.08■■■□□ 2.89
CMTM4-202ENST00000394106 MFSD14AQ96MC6 490 aa33.08■■■□□ 2.89
CMTM4-202ENST00000394106 CGRRF1Q99675 332 aa33.08■■■□□ 2.89
CMTM4-202ENST00000394106 KCTD10Q9H3F6 313 aa33.08■■■□□ 2.89
CMTM4-202ENST00000394106 CEP72Q9P209 647 aa33.08■■■□□ 2.89
CMTM4-202ENST00000394106 L1RE1Q9UN81 338 aa33.08■■■□□ 2.89
CMTM4-202ENST00000394106 SNX9Q9Y5X1 595 aa33.08■■■□□ 2.89
CMTM4-202ENST00000394106 MYO1EQ12965 1108 aa33.07■■■□□ 2.88
CMTM4-202ENST00000394106 BMP8AQ7Z5Y6 402 aa33.07■■■□□ 2.88
CMTM4-202ENST00000394106 NPAS3Q8IXF0 933 aa33.07■■■□□ 2.88
CMTM4-202ENST00000394106 FMR1NBQ8N0W7 255 aaPredicted RBP33.07■■■□□ 2.88
CMTM4-202ENST00000394106 HPDLQ96IR7 371 aa33.07■■■□□ 2.88
CMTM4-202ENST00000394106 PRPF40AO75400 957 aaKnown RBP33.06■■■□□ 2.88
CMTM4-202ENST00000394106 PLD1Q13393 1074 aa33.06■■■□□ 2.88
CMTM4-202ENST00000394106 HTR4Q13639 388 aa33.06■■■□□ 2.88
CMTM4-202ENST00000394106 TRAPPC11Q7Z392 1133 aa33.06■■■□□ 2.88
CMTM4-202ENST00000394106 HS6ST3Q8IZP7 471 aa33.06■■■□□ 2.88
CMTM4-202ENST00000394106 TTC9BQ8N6N2 239 aa33.06■■■□□ 2.88
CMTM4-202ENST00000394106 NXPE3Q969Y0 559 aa33.06■■■□□ 2.88
CMTM4-202ENST00000394106 AVENQ9NQS1 362 aaPredicted RBP33.06■■■□□ 2.88
CMTM4-202ENST00000394106 GDAP2Q9NXN4 497 aa33.06■■■□□ 2.88
CMTM4-202ENST00000394106 DUSP12Q9UNI6 340 aa33.06■■■□□ 2.88
CMTM4-202ENST00000394106 NUMBLQ9Y6R0 609 aa33.06■■■□□ 2.88
CMTM4-202ENST00000394106 ANHXE9PGG2 379 aa33.05■■■□□ 2.88
CMTM4-202ENST00000394106 NARSO43776 548 aaKnown RBP33.05■■■□□ 2.88
CMTM4-202ENST00000394106 KIF20AO95235 890 aa33.05■■■□□ 2.88
CMTM4-202ENST00000394106 ALDH1A3P47895 512 aa33.05■■■□□ 2.88
CMTM4-202ENST00000394106 PDZD4Q76G19 769 aaPredicted RBP33.05■■■□□ 2.88
CMTM4-202ENST00000394106 SLC44A3Q8N4M1 653 aa33.05■■■□□ 2.88
CMTM4-202ENST00000394106 MAPK8IP1Q9UQF2 711 aa33.05■■■□□ 2.88
CMTM4-202ENST00000394106 PDXKO00764 312 aa33.04■■■□□ 2.88
CMTM4-202ENST00000394106 SOAT2O75908 522 aa33.04■■■□□ 2.88
CMTM4-202ENST00000394106 PDGFBP01127 241 aaPredicted RBP33.04■■■□□ 2.88
CMTM4-202ENST00000394106 NR3C1P04150 777 aa33.04■■■□□ 2.88
CMTM4-202ENST00000394106 CEBPBP17676 345 aa33.04■■■□□ 2.88
CMTM4-202ENST00000394106 EPHB3P54753 998 aa33.04■■■□□ 2.88
CMTM4-202ENST00000394106 PNOCQ13519 176 aa33.04■■■□□ 2.88
CMTM4-202ENST00000394106 KCNB1Q14721 858 aa33.04■■■□□ 2.88
CMTM4-202ENST00000394106 CYP4A22Q5TCH4 519 aa33.04■■■□□ 2.88
CMTM4-202ENST00000394106 PARM1Q6UWI2 310 aa33.04■■■□□ 2.88
CMTM4-202ENST00000394106 LRRTM3Q86VH5 581 aa33.04■■■□□ 2.88
CMTM4-202ENST00000394106 SUGP1Q8IWZ8 645 aaKnown RBP33.04■■■□□ 2.88
CMTM4-202ENST00000394106 TCEAL4Q96EI5 215 aa33.04■■■□□ 2.88
CMTM4-202ENST00000394106 MCRS1Q96EZ8 462 aa33.04■■■□□ 2.88
CMTM4-202ENST00000394106 MYL4P12829 197 aa33.03■■■□□ 2.88
CMTM4-202ENST00000394106 CASP4P49662 377 aa33.03■■■□□ 2.88
CMTM4-202ENST00000394106 PRSS36Q5K4E3 855 aa33.03■■■□□ 2.88
CMTM4-202ENST00000394106 DCP1BQ8IZD4 617 aaKnown RBP33.03■■■□□ 2.88
CMTM4-202ENST00000394106 TMEM86AQ8N2M4 240 aa33.03■■■□□ 2.88
CMTM4-202ENST00000394106 FBXL6Q8N531 539 aa33.03■■■□□ 2.88
CMTM4-202ENST00000394106 TOP6BLQ8N6T0 577 aa33.03■■■□□ 2.88
CMTM4-202ENST00000394106 FGF14Q92915 247 aa33.03■■■□□ 2.88
CMTM4-202ENST00000394106 SEPT5Q99719 369 aaPredicted RBP33.03■■■□□ 2.88
CMTM4-202ENST00000394106 GZF1Q9H116 711 aaPredicted RBP33.03■■■□□ 2.88
CMTM4-202ENST00000394106 ASAH2Q9NR71 780 aa33.03■■■□□ 2.88
CMTM4-202ENST00000394106 DMAC2Q9NW81 257 aa33.03■■■□□ 2.88
CMTM4-202ENST00000394106 DDX43Q9NXZ2 648 aaKnown RBP33.03■■■□□ 2.88
CMTM4-202ENST00000394106 ZNF197O14709 1029 aa33.02■■■□□ 2.88
CMTM4-202ENST00000394106 CALUO43852 315 aaPredicted RBP33.02■■■□□ 2.88
CMTM4-202ENST00000394106 CCR2P41597 374 aa33.02■■■□□ 2.88
CMTM4-202ENST00000394106 TSPY1Q01534 308 aa33.02■■■□□ 2.88
CMTM4-202ENST00000394106 FAM160A1Q05DH4 1040 aa33.02■■■□□ 2.88
CMTM4-202ENST00000394106 SNW1Q13573 536 aaKnown RBP33.02■■■□□ 2.88
CMTM4-202ENST00000394106 MTSS1LQ765P7 747 aa33.02■■■□□ 2.88
CMTM4-202ENST00000394106 SLC9A9Q8IVB4 645 aa33.02■■■□□ 2.88
CMTM4-202ENST00000394106 ADGRF2Q8IZF7 708 aa33.02■■■□□ 2.88
CMTM4-202ENST00000394106 ZNF516Q92618 1163 aa33.02■■■□□ 2.88
CMTM4-202ENST00000394106 FBXL21Q9UKT6 434 aa33.02■■■□□ 2.88
CMTM4-202ENST00000394106 ACAT1P24752 427 aaKnown RBP33.01■■■□□ 2.87
CMTM4-202ENST00000394106 MYL7Q01449 175 aa33.01■■■□□ 2.87
CMTM4-202ENST00000394106 SOWAHAQ2M3V2 549 aa33.01■■■□□ 2.87
CMTM4-202ENST00000394106 MGAT5BQ3V5L5 792 aa33.01■■■□□ 2.87
CMTM4-202ENST00000394106 OSTM1Q86WC4 334 aa33.01■■■□□ 2.87
CMTM4-202ENST00000394106 ENGASEQ8NFI3 743 aa33.01■■■□□ 2.87
CMTM4-202ENST00000394106 PLEKHO2Q8TD55 490 aa33.01■■■□□ 2.87
CMTM4-202ENST00000394106 RPP25Q9BUL9 199 aaKnown RBP33.01■■■□□ 2.87
CMTM4-202ENST00000394106 DNAJC25Q9H1X3 360 aa33.01■■■□□ 2.87
CMTM4-202ENST00000394106 ABI2Q9NYB9 513 aaPredicted RBP33.01■■■□□ 2.87
CMTM4-202ENST00000394106 CST3P01034 146 aaPredicted RBP33■■■□□ 2.87
CMTM4-202ENST00000394106 CEP135Q66GS9 1140 aa33■■■□□ 2.87
CMTM4-202ENST00000394106 FAM200AQ8TCP9 573 aa33■■■□□ 2.87
CMTM4-202ENST00000394106 C2orf15Q8WU43 125 aaKnown RBP33■■■□□ 2.87
CMTM4-202ENST00000394106 GDE1Q9NZC3 331 aa33■■■□□ 2.87
CMTM4-202ENST00000394106 HSFX1Q9UBD0 423 aa33■■■□□ 2.87
CMTM4-202ENST00000394106 CIZ1Q9ULV3 898 aaPredicted RBP33■■■□□ 2.87
CMTM4-202ENST00000394106 PHACTR2O75167 634 aa32.99■■■□□ 2.87
CMTM4-202ENST00000394106 CFHP08603 1231 aa32.99■■■□□ 2.87
CMTM4-202ENST00000394106 TUFMP49411 452 aaKnown RBP32.99■■■□□ 2.87
CMTM4-202ENST00000394106 SMARCB1Q12824 385 aa32.99■■■□□ 2.87
CMTM4-202ENST00000394106 TRPC3Q13507 836 aa32.99■■■□□ 2.87
CMTM4-202ENST00000394106 LEMD2Q8NC56 503 aa32.99■■■□□ 2.87
CMTM4-202ENST00000394106 SPPL2BQ8TCT7 592 aa32.99■■■□□ 2.87
CMTM4-202ENST00000394106 TMEM174Q8WUU8 243 aa32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms