RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ST3GAL2Q16842 350 aa16.7■□□□□ 0.26
CHMP3-202ENST00000393773 USP37Q86T82 979 aa16.7■□□□□ 0.26
CHMP3-202ENST00000393773 WDR5BQ86VZ2 330 aa16.7■□□□□ 0.26
CHMP3-202ENST00000393773 OR10T2Q8NGX3 314 aa16.7■□□□□ 0.26
CHMP3-202ENST00000393773 TTC8Q8TAM2 541 aa16.7■□□□□ 0.26
CHMP3-202ENST00000393773 NUP205Q92621 2012 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 LACTBL1A8MY62 500 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 FGF19O95750 216 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 ADRB2P07550 413 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 ODC1P11926 461 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 ATF6P18850 670 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 GABRR2P28476 465 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 WEE1P30291 646 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 SMTNP53814 917 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 CYP4F8P98187 520 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 TNK2Q07912 1038 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 GPR158Q5T848 1215 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 PKN3Q6P5Z2 889 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 DSTYKQ6XUX3 929 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 DTHD1Q6ZMT9 781 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 DNAJB7Q7Z6W7 309 aaPredicted RBP16.69■□□□□ 0.26
CHMP3-202ENST00000393773 SYT2Q8N9I0 419 aaPredicted RBP16.69■□□□□ 0.26
CHMP3-202ENST00000393773 LPIN3Q9BQK8 851 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 ATXN3LQ9H3M9 355 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 IL21Q9HBE4 155 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 KCND2Q9NZV8 630 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 HSFX1Q9UBD0 423 aa16.69■□□□□ 0.26
CHMP3-202ENST00000393773 ZZEF1O43149 2961 aa16.68■□□□□ 0.26
CHMP3-202ENST00000393773 NPHP3-ACAD11A0A0J9YXS1 232 aa16.68■□□□□ 0.26
CHMP3-202ENST00000393773 XPOTO43592 962 aaKnown RBP16.68■□□□□ 0.26
CHMP3-202ENST00000393773 FOXD2O60548 495 aaPredicted RBP16.68■□□□□ 0.26
CHMP3-202ENST00000393773 SEC24BO95487 1268 aa16.68■□□□□ 0.26
CHMP3-202ENST00000393773 PIGRP01833 764 aa16.68■□□□□ 0.26
CHMP3-202ENST00000393773 MATR3P43243 847 aaKnown RBP eCLIP16.68■□□□□ 0.26
CHMP3-202ENST00000393773 LILRA4P59901 499 aa16.68■□□□□ 0.26
CHMP3-202ENST00000393773 ATP2C1P98194 919 aaPredicted RBP16.68■□□□□ 0.26
CHMP3-202ENST00000393773 TMEM119Q4V9L6 283 aa16.68■□□□□ 0.26
CHMP3-202ENST00000393773 SPATA1Q5VX52 437 aa16.68■□□□□ 0.26
CHMP3-202ENST00000393773 SYNPOQ8N3V7 929 aa16.68■□□□□ 0.26
CHMP3-202ENST00000393773 FAM184AQ8NB25 1140 aa16.68■□□□□ 0.26
CHMP3-202ENST00000393773 BPIFB1Q8TDL5 484 aa16.68■□□□□ 0.26
CHMP3-202ENST00000393773 CHFRQ96EP1 664 aa16.68■□□□□ 0.26
CHMP3-202ENST00000393773 BICD1Q96G01 975 aa16.68■□□□□ 0.26
CHMP3-202ENST00000393773 KCNG1Q9UIX4 513 aa16.68■□□□□ 0.26
CHMP3-202ENST00000393773 H0YCG3 227 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 DPYSL4O14531 572 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 HNRNPDLO14979 420 aaKnown RBP16.67■□□□□ 0.26
CHMP3-202ENST00000393773 OGTO15294 1046 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 CYP11A1P05108 521 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 NFICP08651 508 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 PLA2G4BP0C869 781 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 MCM2P49736 904 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 LIMK1P53667 647 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 PLCB2Q00722 1185 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 ZRSR1Q15695 479 aaKnown RBP16.67■□□□□ 0.26
CHMP3-202ENST00000393773 KYAT1Q16773 422 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 ARHGAP15Q53QZ3 475 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 ARSHQ5FYA8 562 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 JADE1Q6IE81 842 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 SLC39A4Q6P5W5 647 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 CEP68Q76N32 757 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 HAUS6Q7Z4H7 955 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 ITIH5Q86UX2 942 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 KCTD17Q8N5Z5 321 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 FAM200AQ8TCP9 573 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 SENP8Q96LD8 212 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 SMG9Q9H0W8 520 aaKnown RBP16.67■□□□□ 0.26
CHMP3-202ENST00000393773 TASP1Q9H6P5 420 aa16.67■□□□□ 0.26
CHMP3-202ENST00000393773 LARSQ9P2J5 1176 aaKnown RBP16.67■□□□□ 0.26
CHMP3-202ENST00000393773 PTPRDP23468 1912 aa16.66■□□□□ 0.26
CHMP3-202ENST00000393773 EXTL3O43909 919 aa16.66■□□□□ 0.26
CHMP3-202ENST00000393773 EPN2O95208 641 aa16.66■□□□□ 0.26
CHMP3-202ENST00000393773 CDC25CP30307 473 aa16.66■□□□□ 0.26
CHMP3-202ENST00000393773 LIG4P49917 911 aa16.66■□□□□ 0.26
CHMP3-202ENST00000393773 SF3A2Q15428 464 aaKnown RBP16.66■□□□□ 0.26
CHMP3-202ENST00000393773 ITPRIPL2Q3MIP1 535 aa16.66■□□□□ 0.26
CHMP3-202ENST00000393773 SLC39A12Q504Y0 691 aa16.66■□□□□ 0.26
CHMP3-202ENST00000393773 C9orf57Q5W0N0 161 aa16.66■□□□□ 0.26
CHMP3-202ENST00000393773 LRRC15Q8TF66 581 aa16.66■□□□□ 0.26
CHMP3-202ENST00000393773 GAB3Q8WWW8 586 aa16.66■□□□□ 0.26
CHMP3-202ENST00000393773 TSPAN18Q96SJ8 248 aa16.66■□□□□ 0.26
CHMP3-202ENST00000393773 PLIN2Q99541 437 aa16.66■□□□□ 0.26
CHMP3-202ENST00000393773 SEPT5Q99719 369 aaPredicted RBP16.66■□□□□ 0.26
CHMP3-202ENST00000393773 REEP2Q9BRK0 252 aa16.66■□□□□ 0.26
CHMP3-202ENST00000393773 ZCWPW1Q9H0M4 648 aa16.66■□□□□ 0.26
CHMP3-202ENST00000393773 RPF1Q9H9Y2 349 aaKnown RBP16.66■□□□□ 0.26
CHMP3-202ENST00000393773 HPS4Q9NQG7 708 aa16.66■□□□□ 0.26
CHMP3-202ENST00000393773 SH2B1Q9NRF2 756 aaPredicted RBP16.66■□□□□ 0.26
CHMP3-202ENST00000393773 CPSF3Q9UKF6 684 aaKnown RBP16.66■□□□□ 0.26
CHMP3-202ENST00000393773 ODF2LQ9ULJ1 636 aa16.66■□□□□ 0.26
CHMP3-202ENST00000393773 TBX20Q9UMR3 447 aa16.66■□□□□ 0.26
CHMP3-202ENST00000393773 A0A0B4J269 797 aa16.65■□□□□ 0.26
CHMP3-202ENST00000393773 ANO9A1A5B4 782 aa16.65■□□□□ 0.26
CHMP3-202ENST00000393773 K7ENM7 598 aa16.65■□□□□ 0.26
CHMP3-202ENST00000393773 PIRO00625 290 aa16.65■□□□□ 0.26
CHMP3-202ENST00000393773 RAP1GAPP47736 663 aa16.65■□□□□ 0.26
CHMP3-202ENST00000393773 VEPH1Q14D04 833 aa16.65■□□□□ 0.26
CHMP3-202ENST00000393773 TMEM196Q5HYL7 178 aa16.65■□□□□ 0.26
CHMP3-202ENST00000393773 FSTL4Q6MZW2 842 aa16.65■□□□□ 0.26
CHMP3-202ENST00000393773 ARMCX5Q6P1M9 558 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms