RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 SLCO1B3Q9NPD5 702 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 CEP72Q9P209 647 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 TEKT2Q9UIF3 430 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 GGA1Q9UJY5 639 aa8□□□□□ -1.13
VTI1A-201ENST00000393077 SPATA31A1Q5TZJ5 1347 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 USP42Q9H9J4 1324 aaKnown RBP7.99□□□□□ -1.13
VTI1A-201ENST00000393077 TTC34A8MYJ7 566 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 TMEM114B3SHH9 223 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 USP17L12C9JPN9 530 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 USP17L21D6R901 530 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 PSMD11O00231 422 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 GAS7O60861 476 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 RNASEH1O60930 286 aaKnown RBP7.99□□□□□ -1.13
VTI1A-201ENST00000393077 PARNO95453 639 aaKnown RBP7.99□□□□□ -1.13
VTI1A-201ENST00000393077 PRKACAP17612 351 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 TCEA1P23193 301 aaKnown RBP7.99□□□□□ -1.13
VTI1A-201ENST00000393077 IL4RP24394 825 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 SLC1A1P43005 524 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 CETN1Q12798 172 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 NIPAL1Q6NVV3 410 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 ELMSAN1Q6PJG2 1045 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 CYP4V2Q6ZWL3 525 aaPredicted RBP7.99□□□□□ -1.13
VTI1A-201ENST00000393077 NET1Q7Z628 596 aaPredicted RBP7.99□□□□□ -1.13
VTI1A-201ENST00000393077 CCDC103Q8IW40 242 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 TOR1AIP2Q8NFQ8 470 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 STK17AQ9UEE5 414 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 ARHGAP26Q9UNA1 814 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 SYNGAP1Q96PV0 1343 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 H0YGN5 161 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 PRKAB2O43741 272 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 BCL10O95999 233 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 MT-ND3P03897 115 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 KITP10721 976 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 TMPRSS15P98073 1019 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 MAPK7Q13164 816 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 RASA2Q15283 850 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 PRPF39Q86UA1 669 aaKnown RBP7.99□□□□□ -1.13
VTI1A-201ENST00000393077 IFNL3Q8IZI9 196 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 MYO1HQ8N1T3 1032 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 SPERTQ8NA61 448 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 RNF25Q96BH1 459 aaPredicted RBP7.99□□□□□ -1.13
VTI1A-201ENST00000393077 TSNARE1Q96NA8 513 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 ERGIC2Q96RQ1 377 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 EFHD1Q9BUP0 239 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 AS3MTQ9HBK9 375 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 TCEAL9Q9UHQ7 104 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 NFS1Q9Y697 457 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 STK24Q9Y6E0 443 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 MYH10P35580 1976 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 POTEB3A0JP26 581 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 ECE2O60344 883 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 SERPINB7O75635 380 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 DLGAP3O95886 979 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 SPATA31D3P0C874 917 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 P4HA1P13674 534 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 SLC16A2P36021 539 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 DCCP43146 1447 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 CCT8P50990 548 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 XIAPP98170 497 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 TRAF2Q12933 501 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 ITPK1Q13572 414 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 NKX1-1Q15270 411 aaPredicted RBP7.99□□□□□ -1.13
VTI1A-201ENST00000393077 POTEBQ6S5H4 581 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 C4orf22Q6V702 233 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 SPATA31D4Q6ZUB0 917 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 CRLF3Q8IUI8 442 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 ST13P5Q8NFI4 369 aaPredicted RBP7.99□□□□□ -1.13
VTI1A-201ENST00000393077 GABPB2Q8TAK5 448 aaPredicted RBP7.99□□□□□ -1.13
VTI1A-201ENST00000393077 JADE3Q92613 823 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 RMDN1Q96DB5 314 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 VMP1Q96GC9 406 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 RBM15Q96T37 977 aaKnown RBP eCLIP7.99□□□□□ -1.13
VTI1A-201ENST00000393077 MAP3K14Q99558 947 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 EDEM3Q9BZQ6 932 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 VPS51Q9UID3 782 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 MED23Q9ULK4 1368 aa7.99□□□□□ -1.13
VTI1A-201ENST00000393077 H3BSA7 217 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 GH1P01241 217 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 APOA1P02647 267 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 RAG1P15918 1043 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 NCF2P19878 526 aaPredicted RBP7.98□□□□□ -1.13
VTI1A-201ENST00000393077 VCPP55072 806 aaKnown RBP7.98□□□□□ -1.13
VTI1A-201ENST00000393077 TRIM28Q13263 835 aaKnown RBP7.98□□□□□ -1.13
VTI1A-201ENST00000393077 MESDQ14696 234 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 FIGNQ5HY92 759 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 TTI2Q6NXR4 508 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 POTEHQ6S545 545 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 CLNKQ7Z7G1 428 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 RHOT2Q8IXI1 618 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 C9orf72Q96LT7 481 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 TRPV6Q9H1D0 765 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 GBA3Q9H227 469 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 CDC42EP4Q9H3Q1 356 aaKnown RBP7.98□□□□□ -1.13
VTI1A-201ENST00000393077 C8orf4Q9NR00 106 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 ARMCX1Q9P291 453 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 ATP6V1HQ9UI12 483 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 ADGRA3Q8IWK6 1321 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 FAM237AA0A1B0GTK4 181 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 ARHGEF37A1IGU5 675 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 F8W8V4 182 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms