RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 LRRC8BQ6P9F7 803 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 APPL2Q8NEU8 664 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 USP33Q8TEY7 942 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 SCFD2Q8WU76 684 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 ASCC2Q9H1I8 757 aaPredicted RBP13.72□□□□□ -0.21
LCA5-202ENST00000392959 ANKEF1Q9NU02 776 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 BLOC1S6Q9UL45 172 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 PHTF1Q9UMS5 762 aa13.72□□□□□ -0.21
LCA5-202ENST00000392959 EXTL3O43909 919 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 DEAF1O75398 565 aaPredicted RBP13.71□□□□□ -0.21
LCA5-202ENST00000392959 UBTFL6P0CB48 400 aaPredicted RBP13.71□□□□□ -0.21
LCA5-202ENST00000392959 ACADSP16219 412 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 ITIH4Q14624 930 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 EZH2Q15910 746 aaKnown RBP13.71□□□□□ -0.21
LCA5-202ENST00000392959 BTNL9Q6UXG8 535 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 C4orf22Q6V702 233 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 CLEC4FQ8N1N0 589 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 ZNF507Q8TCN5 953 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 TARS2Q9BW92 718 aaKnown RBP13.71□□□□□ -0.21
LCA5-202ENST00000392959 PACSIN1Q9BY11 444 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 ARHGAP20Q9P2F6 1191 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 TJP2Q9UDY2 1190 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 PIN4Q9Y237 131 aaKnown RBP13.71□□□□□ -0.21
LCA5-202ENST00000392959 ABCA6Q8N139 1617 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 GPR75-ASB3A0A0A6YYF3 556 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 ZSCAN9O15535 394 aaPredicted RBP13.71□□□□□ -0.21
LCA5-202ENST00000392959 ARHGEF9O43307 516 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 TCN1P20061 433 aaPredicted RBP13.71□□□□□ -0.21
LCA5-202ENST00000392959 GPD1P21695 349 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 KCNA4P22459 653 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 SERPINB3P29508 390 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 NNMTP40261 264 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 TRPC1P48995 793 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 OVGP1Q12889 678 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 PDAP1Q13442 181 aaKnown RBP13.71□□□□□ -0.21
LCA5-202ENST00000392959 NLRP9Q7RTR0 991 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 ACTRT1Q8TDG2 376 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 GANCQ8TET4 914 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 MOV10L1Q9BXT6 1211 aaKnown RBP13.71□□□□□ -0.21
LCA5-202ENST00000392959 KCNH7Q9NS40 1196 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.71□□□□□ -0.21
LCA5-202ENST00000392959 CDC42BPAQ5VT25 1732 aa13.71□□□□□ -0.21
LCA5-202ENST00000392959 MAFGO15525 162 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 NQO1P15559 274 aaKnown RBP13.71□□□□□ -0.22
LCA5-202ENST00000392959 CACNB2Q08289 660 aaPredicted RBP13.71□□□□□ -0.22
LCA5-202ENST00000392959 URGCPQ8TCY9 931 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 ZNF669Q96BR6 464 aaPredicted RBP13.71□□□□□ -0.22
LCA5-202ENST00000392959 ELMO2Q96JJ3 720 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 FAM111AQ96PZ2 611 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 ZC4H2Q9NQZ6 224 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 FAM49BQ9NUQ9 324 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 IRAK4Q9NWZ3 460 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 CDYLQ9Y232 598 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 NTSR2O95665 410 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 PDGFRBP09619 1106 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 RARBP10826 455 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 CDH2P19022 906 aaPredicted RBP13.71□□□□□ -0.22
LCA5-202ENST00000392959 RFC5P40937 340 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 SCTRP47872 440 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 BOLA3Q53S33 107 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 RRM2BQ7LG56 351 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 CDR2LQ86X02 465 aaPredicted RBP13.71□□□□□ -0.22
LCA5-202ENST00000392959 ATPAF2Q8N5M1 289 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 ATG4AQ8WYN0 398 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 KDM4CQ9H3R0 1056 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 SMARCAD1Q9H4L7 1026 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 NSMCE4AQ9NXX6 385 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.71□□□□□ -0.22
LCA5-202ENST00000392959 LZTS1Q9Y250 596 aa13.71□□□□□ -0.22
LCA5-202ENST00000392959 EEF2KO00418 725 aaKnown RBP13.7□□□□□ -0.22
LCA5-202ENST00000392959 CAND2O75155 1236 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 SRP72O76094 671 aaKnown RBP13.7□□□□□ -0.22
LCA5-202ENST00000392959 PTK2BQ14289 1009 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 DDX28Q9NUL7 540 aaKnown RBP13.7□□□□□ -0.22
LCA5-202ENST00000392959 HEY2Q9UBP5 337 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 MSH4O15457 936 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 CPB1P15086 417 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 HLA-DPA1P20036 260 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 CTCFP49711 727 aaPredicted RBP13.7□□□□□ -0.22
LCA5-202ENST00000392959 COPAP53621 1224 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 ANO4Q32M45 955 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 PRR5LQ6MZQ0 368 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 SUGP1Q8IWZ8 645 aaKnown RBP13.7□□□□□ -0.22
LCA5-202ENST00000392959 ZNF555Q8NEP9 628 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 KAZALD1Q96I82 304 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 SEMA6BQ9H3T3 888 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 ANKZF1Q9H8Y5 726 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 MOSPD1Q9UJG1 213 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 E2F8A0AVK6 867 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 DAB1O75553 588 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 IL18RAPO95256 599 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 SMIM5Q71RC9 77 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 TAGAPQ8N103 731 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 ATP8B4Q8TF62 1192 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 GPBP1L1Q9HC44 474 aaPredicted RBP13.7□□□□□ -0.22
LCA5-202ENST00000392959 TBC1D23Q9NUY8 699 aa13.7□□□□□ -0.22
LCA5-202ENST00000392959 KDM1AO60341 852 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 ATP6V1E1P36543 226 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 PPP4CP60510 307 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 DCAF4L1Q3SXM0 396 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms