RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 CXCL8P10145 99 aa17.4■□□□□ 0.38
SCN3B-202ENST00000392770 ACOT1Q86TX2 421 aa17.4■□□□□ 0.38
SCN3B-202ENST00000392770 PPHLN1Q8NEY8 458 aaKnown RBP17.4■□□□□ 0.38
SCN3B-202ENST00000392770 HNRNPH2P55795 449 aaKnown RBP17.4■□□□□ 0.38
SCN3B-202ENST00000392770 ATXN7L3BQ96GX2 97 aa17.4■□□□□ 0.38
SCN3B-202ENST00000392770 ERP44Q9BS26 406 aa17.4■□□□□ 0.38
SCN3B-202ENST00000392770 TRPV6Q9H1D0 765 aa17.4■□□□□ 0.38
SCN3B-202ENST00000392770 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.4■□□□□ 0.38
SCN3B-202ENST00000392770 VDRP11473 427 aa17.39■□□□□ 0.38
SCN3B-202ENST00000392770 ERVK-9P63128 1117 aa17.39■□□□□ 0.38
SCN3B-202ENST00000392770 ART3Q13508 389 aa17.39■□□□□ 0.38
SCN3B-202ENST00000392770 SNX17Q15036 470 aa17.39■□□□□ 0.38
SCN3B-202ENST00000392770 SLC13A5Q86YT5 568 aaPredicted RBP17.39■□□□□ 0.38
SCN3B-202ENST00000392770 SPIRE2Q8WWL2 714 aa17.39■□□□□ 0.38
SCN3B-202ENST00000392770 ALKBH8Q96BT7 664 aaKnown RBP17.39■□□□□ 0.38
SCN3B-202ENST00000392770 PRMT1Q99873 361 aaKnown RBP17.39■□□□□ 0.38
SCN3B-202ENST00000392770 H3BRB1 525 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 TBX2Q13207 712 aaPredicted RBP17.39■□□□□ 0.37
SCN3B-202ENST00000392770 TATDN2Q93075 761 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 TUT1Q9H6E5 874 aaKnown RBP17.39■□□□□ 0.37
SCN3B-202ENST00000392770 PPARGC1AQ9UBK2 798 aaKnown RBP17.39■□□□□ 0.37
SCN3B-202ENST00000392770 F8W8V4 182 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 TTC4O95801 387 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 AGTP01019 485 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 PRAMEP78395 509 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 TATDN1Q6P1N9 297 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 SV2AQ7L0J3 742 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 ELMO3Q96BJ8 720 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 DDX50Q9BQ39 737 aaKnown RBP17.39■□□□□ 0.37
SCN3B-202ENST00000392770 FHDC1Q9C0D6 1143 aaPredicted RBP17.39■□□□□ 0.37
SCN3B-202ENST00000392770 CACNA1FO60840 1977 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 SNX2O60749 519 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 CLEC16AQ2KHT3 1053 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 MGAT5BQ3V5L5 792 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 DNAAF5Q86Y56 855 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 GTSE1Q9NYZ3 720 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 NCAM1P13591 858 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 ACCSLQ4AC99 568 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 SH2D3CQ8N5H7 860 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 REPS2Q8NFH8 660 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 GANCQ8TET4 914 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 SH3TC2Q8TF17 1288 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 GLT1D1Q96MS3 346 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 PIDD1Q9HB75 910 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 OSGEPQ9NPF4 335 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 ZFP69BQ9UJL9 534 aa17.39■□□□□ 0.37
SCN3B-202ENST00000392770 ROBO3Q96MS0 1386 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 POU5F1BQ06416 359 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 TRAPPC12Q8WVT3 735 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 CYFIP2Q96F07 1278 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 PURBQ96QR8 312 aaKnown RBP17.38■□□□□ 0.37
SCN3B-202ENST00000392770 LACRTQ9GZZ8 138 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 CARD9Q9H257 536 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 TRABDQ9H4I3 376 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.38■□□□□ 0.37
SCN3B-202ENST00000392770 EPS15L1Q9UBC2 864 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 CHMP6Q96FZ7 201 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 C9orf72Q96LT7 481 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 ADAM33Q9BZ11 813 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 A0A0A6YYK5 440 aaPredicted RBP17.38■□□□□ 0.37
SCN3B-202ENST00000392770 SHROOM1Q2M3G4 852 aaPredicted RBP17.38■□□□□ 0.37
SCN3B-202ENST00000392770 APOBEC2Q9Y235 224 aaKnown RBP17.38■□□□□ 0.37
SCN3B-202ENST00000392770 PPIL2Q13356 520 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 CASKIN2Q8WXE0 1202 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 OSMRQ99650 979 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 L2HGDHQ9H9P8 463 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 CISHQ9NSE2 258 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 LMCD1Q9NZU5 365 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 HACD3Q9P035 362 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 PAPD7Q5XG87 772 aaKnown RBP17.38■□□□□ 0.37
SCN3B-202ENST00000392770 C1orf186Q6ZWK4 172 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 RIOX2Q8IUF8 465 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 NUDCD3Q8IVD9 361 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 FAM71DQ8N9W8 422 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 PNKPQ96T60 521 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 Q9H521 79 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 VTA1Q9NP79 307 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 SARS2Q9NP81 518 aaKnown RBP17.38■□□□□ 0.37
SCN3B-202ENST00000392770 USP20Q9Y2K6 914 aa17.38■□□□□ 0.37
SCN3B-202ENST00000392770 CFAP69A5D8W1 941 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 LRRIQ3A6PVS8 624 aaPredicted RBP17.37■□□□□ 0.37
SCN3B-202ENST00000392770 CFLARO15519 480 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 FAM117BQ6P1L5 589 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 ADGRF2Q8IZF7 708 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 TRPM4Q8TD43 1214 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 RMDN1Q96DB5 314 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.37■□□□□ 0.37
SCN3B-202ENST00000392770 GOLGA8RI6L899 631 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 IRF1P10914 325 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 TYK2P29597 1187 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 TBC1D1Q86TI0 1168 aaPredicted RBP17.37■□□□□ 0.37
SCN3B-202ENST00000392770 CYTH2Q99418 400 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 CYP39A1Q9NYL5 469 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 PAK5Q9P286 719 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 ZC3H7BQ9UGR2 993 aaKnown RBP17.37■□□□□ 0.37
SCN3B-202ENST00000392770 DCTN4Q9UJW0 460 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 SKIP12755 728 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 FUT2Q10981 343 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 KIF19Q2TAC6 998 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 OR6P1Q8NGX9 317 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms