RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 CCDC77Q9BR77 488 aa13.02□□□□□ -0.33
RFC5-201ENST00000392542 ZNF518BQ9C0D4 1074 aa13.02□□□□□ -0.33
RFC5-201ENST00000392542 SNCAIPQ9Y6H5 919 aa13.02□□□□□ -0.33
RFC5-201ENST00000392542 DNALI1O14645 258 aaPredicted RBP13.01□□□□□ -0.33
RFC5-201ENST00000392542 CDH16O75309 829 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 USP2O75604 605 aaPredicted RBP13.01□□□□□ -0.33
RFC5-201ENST00000392542 ABHD2P08910 425 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 TGFB3P10600 412 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 ATF7P17544 494 aaPredicted RBP13.01□□□□□ -0.33
RFC5-201ENST00000392542 CDH5P33151 784 aaPredicted RBP13.01□□□□□ -0.33
RFC5-201ENST00000392542 PTPN7P35236 360 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 COPS2P61201 443 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 OGDHQ02218 1023 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 LRRC14Q15048 493 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 PPP1R15BQ5SWA1 713 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 ZFYVE27Q5T4F4 411 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 GPAT2Q6NUI2 795 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 DCUN1D2Q6PH85 259 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 SPOCD1Q6ZMY3 1216 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 TCP11Q8WWU5 503 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 C9orf72Q96LT7 481 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 CPSF3Q9UKF6 684 aaKnown RBP13.01□□□□□ -0.33
RFC5-201ENST00000392542 DNPEPQ9ULA0 475 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 PCDHGC3Q9UN70 934 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 IVNS1ABPQ9Y6Y0 642 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 F8VP50 259 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 ABLIM1O14639 778 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 GAS2O43903 313 aaKnown RBP13.01□□□□□ -0.33
RFC5-201ENST00000392542 ATP2C2O75185 946 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 CETPP11597 493 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 MAGEA4P43358 317 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 LAMTOR4Q0VGL1 99 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 TRPC3Q13507 836 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 PIGHQ14442 188 aaPredicted RBP13.01□□□□□ -0.33
RFC5-201ENST00000392542 SMYD5Q6GMV2 418 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 ALLCQ8N6M5 410 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 FHDC1Q9C0D6 1143 aaPredicted RBP13.01□□□□□ -0.33
RFC5-201ENST00000392542 KCNK9Q9NPC2 374 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 DDX56Q9NY93 547 aaKnown RBP13.01□□□□□ -0.33
RFC5-201ENST00000392542 GPRC5DQ9NZD1 345 aa13.01□□□□□ -0.33
RFC5-201ENST00000392542 DRG1Q9Y295 367 aaKnown RBP13.01□□□□□ -0.33
RFC5-201ENST00000392542 POLR2AP24928 1970 aaKnown RBP13□□□□□ -0.33
RFC5-201ENST00000392542 hCG_1818297A0A087WSY0 165 aa13□□□□□ -0.33
RFC5-201ENST00000392542 DNAJC8O75937 253 aaPredicted RBP13□□□□□ -0.33
RFC5-201ENST00000392542 SRGAP2CP0DJJ0 459 aa13□□□□□ -0.33
RFC5-201ENST00000392542 BRAFP15056 766 aa13□□□□□ -0.33
RFC5-201ENST00000392542 MXD4Q14582 209 aaPredicted RBP13□□□□□ -0.33
RFC5-201ENST00000392542 MAPK6Q16659 721 aa13□□□□□ -0.33
RFC5-201ENST00000392542 ZNF394Q53GI3 561 aa13□□□□□ -0.33
RFC5-201ENST00000392542 NCAPG2Q86XI2 1143 aa13□□□□□ -0.33
RFC5-201ENST00000392542 CYP4X1Q8N118 509 aa13□□□□□ -0.33
RFC5-201ENST00000392542 RIBC1Q8N443 379 aaPredicted RBP13□□□□□ -0.33
RFC5-201ENST00000392542 WDTC1Q8N5D0 677 aa13□□□□□ -0.33
RFC5-201ENST00000392542 NIPA2Q8N8Q9 360 aa13□□□□□ -0.33
RFC5-201ENST00000392542 ANKRD42Q8N9B4 389 aa13□□□□□ -0.33
RFC5-201ENST00000392542 CKAP2Q8WWK9 683 aa13□□□□□ -0.33
RFC5-201ENST00000392542 RBM15Q96T37 977 aaKnown RBP eCLIP13□□□□□ -0.33
RFC5-201ENST00000392542 SPATC1LQ9H0A9 340 aa13□□□□□ -0.33
RFC5-201ENST00000392542 C2orf40Q9H1Z8 148 aa13□□□□□ -0.33
RFC5-201ENST00000392542 KLC4Q9NSK0 619 aa13□□□□□ -0.33
RFC5-201ENST00000392542 EURLQ9NYK6 297 aa13□□□□□ -0.33
RFC5-201ENST00000392542 NAALADL1Q9UQQ1 740 aa13□□□□□ -0.33
RFC5-201ENST00000392542 ZNF148Q9UQR1 794 aa13□□□□□ -0.33
RFC5-201ENST00000392542 ACTL7BQ9Y614 415 aa13□□□□□ -0.33
RFC5-201ENST00000392542 TCP11X1B4DZS4 312 aa13□□□□□ -0.33
RFC5-201ENST00000392542 SNX3O60493 162 aa13□□□□□ -0.33
RFC5-201ENST00000392542 OAS1P00973 400 aaKnown RBP13□□□□□ -0.33
RFC5-201ENST00000392542 GSTA1P08263 222 aa13□□□□□ -0.33
RFC5-201ENST00000392542 HOXC6P09630 235 aa13□□□□□ -0.33
RFC5-201ENST00000392542 EIF4BP23588 611 aaKnown RBP13□□□□□ -0.33
RFC5-201ENST00000392542 HIRAP54198 1017 aaPredicted RBP13□□□□□ -0.33
RFC5-201ENST00000392542 VGLL4Q14135 290 aa13□□□□□ -0.33
RFC5-201ENST00000392542 LY6KQ17RY6 165 aa13□□□□□ -0.33
RFC5-201ENST00000392542 ZNF699Q32M78 642 aa13□□□□□ -0.33
RFC5-201ENST00000392542 SCARA5Q6ZMJ2 495 aa13□□□□□ -0.33
RFC5-201ENST00000392542 ERICH1Q86X53 443 aa13□□□□□ -0.33
RFC5-201ENST00000392542 GLIS1Q8NBF1 620 aa13□□□□□ -0.33
RFC5-201ENST00000392542 RNF149Q8NC42 400 aa13□□□□□ -0.33
RFC5-201ENST00000392542 TFAP2BQ92481 460 aa13□□□□□ -0.33
RFC5-201ENST00000392542 CEP83Q9Y592 693 aa13□□□□□ -0.33
RFC5-201ENST00000392542 ANK1P16157 1881 aa13□□□□□ -0.33
RFC5-201ENST00000392542 IGKV6-21A0A0C4DH24 114 aa12.99□□□□□ -0.33
RFC5-201ENST00000392542 VGLL3A8MV65 326 aa12.99□□□□□ -0.33
RFC5-201ENST00000392542 FOXO6A8MYZ6 492 aa12.99□□□□□ -0.33
RFC5-201ENST00000392542 LGR5O75473 907 aa12.99□□□□□ -0.33
RFC5-201ENST00000392542 WEE2P0C1S8 567 aa12.99□□□□□ -0.33
RFC5-201ENST00000392542 MARK3P27448 753 aa12.99□□□□□ -0.33
RFC5-201ENST00000392542 ASPAP45381 313 aa12.99□□□□□ -0.33
RFC5-201ENST00000392542 ARSEP51690 589 aa12.99□□□□□ -0.33
RFC5-201ENST00000392542 VCPP55072 806 aaKnown RBP12.99□□□□□ -0.33
RFC5-201ENST00000392542 TFAMQ00059 246 aaKnown RBP12.99□□□□□ -0.33
RFC5-201ENST00000392542 SF3A3Q12874 501 aaKnown RBP eCLIP12.99□□□□□ -0.33
RFC5-201ENST00000392542 XRCC4Q13426 336 aa12.99□□□□□ -0.33
RFC5-201ENST00000392542 MPP2Q14168 576 aa12.99□□□□□ -0.33
RFC5-201ENST00000392542 TFDP3Q5H9I0 405 aa12.99□□□□□ -0.33
RFC5-201ENST00000392542 TXNRD3NBQ6F5E7 133 aa12.99□□□□□ -0.33
RFC5-201ENST00000392542 EEPD1Q7L9B9 569 aa12.99□□□□□ -0.33
RFC5-201ENST00000392542 EXOC8Q8IYI6 725 aa12.99□□□□□ -0.33
RFC5-201ENST00000392542 LRRC71Q8N4P6 559 aa12.99□□□□□ -0.33
RFC5-201ENST00000392542 CFAP57Q96MR6 1250 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms