RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 LRRC52Q8N7C0 313 aa22.7■■□□□ 1.22
SPHK1-202ENST00000392496 SLC4A11Q8NBS3 891 aa22.7■■□□□ 1.22
SPHK1-202ENST00000392496 BTBD6Q96KE9 485 aa22.7■■□□□ 1.22
SPHK1-202ENST00000392496 LHX5Q9H2C1 402 aa22.7■■□□□ 1.22
SPHK1-202ENST00000392496 CCDC66A2RUB6 948 aa22.69■■□□□ 1.22
SPHK1-202ENST00000392496 CCDC188H7C350 402 aa22.69■■□□□ 1.22
SPHK1-202ENST00000392496 XPOTO43592 962 aaKnown RBP22.69■■□□□ 1.22
SPHK1-202ENST00000392496 SPOPO43791 374 aa22.69■■□□□ 1.22
SPHK1-202ENST00000392496 KCNE1P15382 129 aa22.69■■□□□ 1.22
SPHK1-202ENST00000392496 CD19P15391 556 aa22.69■■□□□ 1.22
SPHK1-202ENST00000392496 C8orf74Q6P047 294 aa22.69■■□□□ 1.22
SPHK1-202ENST00000392496 TMEM176AQ96HP8 235 aa22.69■■□□□ 1.22
SPHK1-202ENST00000392496 BARX2Q9UMQ3 279 aaPredicted RBP22.69■■□□□ 1.22
SPHK1-202ENST00000392496 TLR3O15455 904 aaKnown RBP22.68■■□□□ 1.22
SPHK1-202ENST00000392496 AKAP5P24588 427 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 CTNNA1P35221 906 aaKnown RBP22.68■■□□□ 1.22
SPHK1-202ENST00000392496 SLC1A1P43005 524 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 PEX5P50542 639 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 PTPN11Q06124 597 aaPredicted RBP22.68■■□□□ 1.22
SPHK1-202ENST00000392496 C1orf131Q8NDD1 294 aaKnown RBP22.68■■□□□ 1.22
SPHK1-202ENST00000392496 ALG3Q92685 438 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 NAP1L3Q99457 506 aaPredicted RBP22.68■■□□□ 1.22
SPHK1-202ENST00000392496 APOL6Q9BWW8 343 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 ELOVL4Q9GZR5 314 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 PARVAQ9NVD7 372 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 TUBGCP4Q9UGJ1 667 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 IPPQ9Y573 584 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 MYO1FO00160 1098 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 RPS6KA5O75582 802 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 SEC31AO94979 1220 aaKnown RBP22.68■■□□□ 1.22
SPHK1-202ENST00000392496 CD4P01730 458 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 HSPA8P11142 646 aaKnown RBP22.68■■□□□ 1.22
SPHK1-202ENST00000392496 MAMLD1Q13495 774 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 SMG8Q8ND04 991 aaKnown RBP22.68■■□□□ 1.22
SPHK1-202ENST00000392496 RAET1EQ8TD07 263 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 PXYLP1Q8TE99 480 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 KRT35Q92764 455 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 RNPC3Q96LT9 517 aaKnown RBP22.68■■□□□ 1.22
SPHK1-202ENST00000392496 TWNKQ96RR1 684 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 SENP6Q9GZR1 1112 aaPredicted RBP22.68■■□□□ 1.22
SPHK1-202ENST00000392496 PARP2Q9UGN5 583 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 DDX20Q9UHI6 824 aaKnown RBP22.68■■□□□ 1.22
SPHK1-202ENST00000392496 TRIM17Q9Y577 477 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 PCDHA3Q9Y5H8 950 aa22.68■■□□□ 1.22
SPHK1-202ENST00000392496 SMIM28A0A1B0GU29 152 aa22.67■■□□□ 1.22
SPHK1-202ENST00000392496 VDRP11473 427 aa22.67■■□□□ 1.22
SPHK1-202ENST00000392496 LBX1P52954 281 aa22.67■■□□□ 1.22
SPHK1-202ENST00000392496 MGAT3Q09327 533 aa22.67■■□□□ 1.22
SPHK1-202ENST00000392496 LONRF2Q1L5Z9 754 aa22.67■■□□□ 1.22
SPHK1-202ENST00000392496 C2CD6Q53TS8 623 aa22.67■■□□□ 1.22
SPHK1-202ENST00000392496 BEND6Q5SZJ8 279 aaPredicted RBP22.67■■□□□ 1.22
SPHK1-202ENST00000392496 TWF2Q6IBS0 349 aaKnown RBP22.67■■□□□ 1.22
SPHK1-202ENST00000392496 WDTC1Q8N5D0 677 aa22.67■■□□□ 1.22
SPHK1-202ENST00000392496 WNT8BQ93098 351 aa22.67■■□□□ 1.22
SPHK1-202ENST00000392496 C18orf25Q96B23 403 aaPredicted RBP22.67■■□□□ 1.22
SPHK1-202ENST00000392496 CHST12Q9NRB3 414 aa22.67■■□□□ 1.22
SPHK1-202ENST00000392496 KIAA1257Q9ULG3 409 aa22.67■■□□□ 1.22
SPHK1-202ENST00000392496 CABYRO75952 493 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 ATF7P17544 494 aaPredicted RBP22.66■■□□□ 1.22
SPHK1-202ENST00000392496 CYP3A5P20815 502 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 GLRA4Q5JXX5 417 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 C9orf57Q5W0N0 161 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 PHLDB2Q86SQ0 1253 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 RNF180Q86T96 592 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 KRT12Q99456 494 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 RNF39Q9H2S5 420 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 STIM2Q9P246 746 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 HMGXB4Q9UGU5 601 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 DMGDHQ9UI17 866 aaKnown RBP22.66■■□□□ 1.22
SPHK1-202ENST00000392496 GRIN2DO15399 1336 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 KRIT1O00522 736 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 PROSCO94903 275 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 FGGP02679 453 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 CHRNA1P02708 482 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 MAP9Q49MG5 647 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 LLGL2Q6P1M3 1020 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 DENND1BQ6P3S1 775 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 ERICH1Q86X53 443 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 FEZF2Q8TBJ5 459 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 HDAC7Q8WUI4 952 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 LCMT1Q9UIC8 334 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 ST3GAL5Q9UNP4 418 aa22.66■■□□□ 1.22
SPHK1-202ENST00000392496 SCN1AP35498 2009 aa22.65■■□□□ 1.22
SPHK1-202ENST00000392496 PIRO00625 290 aa22.65■■□□□ 1.22
SPHK1-202ENST00000392496 MARCKSL1P49006 195 aa22.65■■□□□ 1.22
SPHK1-202ENST00000392496 NDST1P52848 882 aa22.65■■□□□ 1.22
SPHK1-202ENST00000392496 CNGA2Q16280 664 aa22.65■■□□□ 1.22
SPHK1-202ENST00000392496 PTGISQ16647 500 aa22.65■■□□□ 1.22
SPHK1-202ENST00000392496 TRIM7Q9C029 511 aa22.65■■□□□ 1.22
SPHK1-202ENST00000392496 KLK14Q9P0G3 267 aa22.65■■□□□ 1.22
SPHK1-202ENST00000392496 STRIP2Q9ULQ0 834 aa22.65■■□□□ 1.22
SPHK1-202ENST00000392496 TCRBV5S1A1TA0A578 114 aa22.64■■□□□ 1.22
SPHK1-202ENST00000392496 PPEF2O14830 753 aa22.64■■□□□ 1.22
SPHK1-202ENST00000392496 MYCNP04198 464 aaPredicted RBP22.64■■□□□ 1.22
SPHK1-202ENST00000392496 CTSHP09668 335 aa22.64■■□□□ 1.22
SPHK1-202ENST00000392496 RWDD2BP57060 319 aa22.64■■□□□ 1.22
SPHK1-202ENST00000392496 SGO2Q562F6 1265 aa22.64■■□□□ 1.22
SPHK1-202ENST00000392496 SEL1L2Q5TEA6 688 aa22.64■■□□□ 1.22
SPHK1-202ENST00000392496 CCNI2Q6ZMN8 369 aaPredicted RBP22.64■■□□□ 1.22
SPHK1-202ENST00000392496 CPNE8Q86YQ8 564 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms