RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 TFIP11Q9UBB9 837 aaKnown RBP17.93■□□□□ 0.46
PTPRK-208ENST00000392449 SEL1LQ9UBV2 794 aa17.93■□□□□ 0.46
PTPRK-208ENST00000392449 NDRG2Q9UN36 371 aaKnown RBP17.93■□□□□ 0.46
PTPRK-208ENST00000392449 CYP11A1P05108 521 aa17.92■□□□□ 0.46
PTPRK-208ENST00000392449 GAP43P17677 238 aa17.92■□□□□ 0.46
PTPRK-208ENST00000392449 ALDH1A3P47895 512 aa17.92■□□□□ 0.46
PTPRK-208ENST00000392449 TAF6P49848 677 aa17.92■□□□□ 0.46
PTPRK-208ENST00000392449 CCDC73Q6ZRK6 1079 aa17.92■□□□□ 0.46
PTPRK-208ENST00000392449 GAREM2Q75VX8 874 aa17.92■□□□□ 0.46
PTPRK-208ENST00000392449 LRRTM3Q86VH5 581 aa17.92■□□□□ 0.46
PTPRK-208ENST00000392449 NOC3LQ8WTT2 800 aaKnown RBP17.92■□□□□ 0.46
PTPRK-208ENST00000392449 BORCS6Q96GS4 357 aa17.92■□□□□ 0.46
PTPRK-208ENST00000392449 ACCSQ96QU6 501 aa17.92■□□□□ 0.46
PTPRK-208ENST00000392449 CBWD1Q9BRT8 395 aa17.92■□□□□ 0.46
PTPRK-208ENST00000392449 ZCWPW1Q9H0M4 648 aa17.92■□□□□ 0.46
PTPRK-208ENST00000392449 PCIF1Q9H4Z3 704 aa17.92■□□□□ 0.46
PTPRK-208ENST00000392449 PANK4Q9NVE7 773 aa17.92■□□□□ 0.46
PTPRK-208ENST00000392449 FRMD3A2A2Y4 597 aa17.91■□□□□ 0.46
PTPRK-208ENST00000392449 HEPACAM2A8MVW5 462 aa17.91■□□□□ 0.46
PTPRK-208ENST00000392449 PRPF6O94906 941 aaKnown RBP17.91■□□□□ 0.46
PTPRK-208ENST00000392449 PSMC3P17980 439 aa17.91■□□□□ 0.46
PTPRK-208ENST00000392449 ATF6P18850 670 aa17.91■□□□□ 0.46
PTPRK-208ENST00000392449 NASPP49321 788 aaPredicted RBP17.91■□□□□ 0.46
PTPRK-208ENST00000392449 TFAMQ00059 246 aaKnown RBP17.91■□□□□ 0.46
PTPRK-208ENST00000392449 PLD1Q13393 1074 aa17.91■□□□□ 0.46
PTPRK-208ENST00000392449 FZD5Q13467 585 aa17.91■□□□□ 0.46
PTPRK-208ENST00000392449 ZNF852Q6ZMS4 543 aa17.91■□□□□ 0.46
PTPRK-208ENST00000392449 DNAJB7Q7Z6W7 309 aaPredicted RBP17.91■□□□□ 0.46
PTPRK-208ENST00000392449 LEMD2Q8NC56 503 aa17.91■□□□□ 0.46
PTPRK-208ENST00000392449 STKLD1Q8NE28 680 aa17.91■□□□□ 0.46
PTPRK-208ENST00000392449 MKNK1Q9BUB5 465 aa17.91■□□□□ 0.46
PTPRK-208ENST00000392449 OLFML3Q9NRN5 406 aa17.91■□□□□ 0.46
PTPRK-208ENST00000392449 DMXL1Q9Y485 3027 aa17.91■□□□□ 0.46
PTPRK-208ENST00000392449 EP300Q09472 2414 aaPredicted RBP17.9■□□□□ 0.46
PTPRK-208ENST00000392449 POLR2BP30876 1174 aaKnown RBP17.9■□□□□ 0.46
PTPRK-208ENST00000392449 POSTNQ15063 836 aa17.9■□□□□ 0.46
PTPRK-208ENST00000392449 STK38Q15208 465 aa17.9■□□□□ 0.46
PTPRK-208ENST00000392449 FOXD4L6Q3SYB3 417 aaPredicted RBP17.9■□□□□ 0.46
PTPRK-208ENST00000392449 MGAT5BQ3V5L5 792 aa17.9■□□□□ 0.46
PTPRK-208ENST00000392449 TSSK4Q6SA08 328 aa17.9■□□□□ 0.46
PTPRK-208ENST00000392449 FOXD4L3Q6VB84 417 aaPredicted RBP17.9■□□□□ 0.46
PTPRK-208ENST00000392449 BRSK2Q8IWQ3 736 aa17.9■□□□□ 0.46
PTPRK-208ENST00000392449 SYCP3Q8IZU3 236 aa17.9■□□□□ 0.46
PTPRK-208ENST00000392449 LINC00301Q8NCQ3 95 aa17.9■□□□□ 0.46
PTPRK-208ENST00000392449 FAM200AQ8TCP9 573 aa17.9■□□□□ 0.46
PTPRK-208ENST00000392449 GIPC2Q8TF65 315 aa17.9■□□□□ 0.46
PTPRK-208ENST00000392449 DNASE1L2Q92874 299 aa17.9■□□□□ 0.46
PTPRK-208ENST00000392449 PSMG2Q969U7 264 aa17.9■□□□□ 0.46
PTPRK-208ENST00000392449 LRRC3BQ96PB8 259 aa17.9■□□□□ 0.46
PTPRK-208ENST00000392449 ZSCAN16Q9H4T2 348 aaPredicted RBP17.9■□□□□ 0.46
PTPRK-208ENST00000392449 TRPV4Q9HBA0 871 aa17.9■□□□□ 0.46
PTPRK-208ENST00000392449 TMLHEQ9NVH6 421 aa17.9■□□□□ 0.46
PTPRK-208ENST00000392449 RBAKQ9NYW8 714 aaPredicted RBP17.9■□□□□ 0.46
PTPRK-208ENST00000392449 EXOC7Q9UPT5 735 aa17.9■□□□□ 0.46
PTPRK-208ENST00000392449 F5P12259 2224 aa17.9■□□□□ 0.46
PTPRK-208ENST00000392449 ZNF292O60281 2723 aa17.9■□□□□ 0.46
PTPRK-208ENST00000392449 KPNA7A9QM74 516 aa17.89■□□□□ 0.45
PTPRK-208ENST00000392449 IL18RAPO95256 599 aa17.89■□□□□ 0.45
PTPRK-208ENST00000392449 LMNAP02545 664 aaKnown RBP17.89■□□□□ 0.45
PTPRK-208ENST00000392449 ITGB3P05106 788 aa17.89■□□□□ 0.45
PTPRK-208ENST00000392449 GABRR2P28476 465 aa17.89■□□□□ 0.45
PTPRK-208ENST00000392449 CYP4F8P98187 520 aa17.89■□□□□ 0.45
PTPRK-208ENST00000392449 CSTF1Q05048 431 aaKnown RBP17.89■□□□□ 0.45
PTPRK-208ENST00000392449 CCDC142Q17RM4 750 aa17.89■□□□□ 0.45
PTPRK-208ENST00000392449 LMBRD2Q68DH5 695 aaPredicted RBP17.89■□□□□ 0.45
PTPRK-208ENST00000392449 METTL23Q86XA0 190 aa17.89■□□□□ 0.45
PTPRK-208ENST00000392449 ZNF687Q8N1G0 1237 aa17.89■□□□□ 0.45
PTPRK-208ENST00000392449 C1orf127Q8N9H9 656 aa17.89■□□□□ 0.45
PTPRK-208ENST00000392449 IRF7Q92985 503 aa17.89■□□□□ 0.45
PTPRK-208ENST00000392449 CLDN23Q96B33 292 aa17.89■□□□□ 0.45
PTPRK-208ENST00000392449 OSBPL6Q9BZF3 934 aa17.89■□□□□ 0.45
PTPRK-208ENST00000392449 ATXN3LQ9H3M9 355 aa17.89■□□□□ 0.45
PTPRK-208ENST00000392449 ABI2Q9NYB9 513 aaPredicted RBP17.89■□□□□ 0.45
PTPRK-208ENST00000392449 DSEQ9UL01 958 aa17.89■□□□□ 0.45
PTPRK-208ENST00000392449 AGAP1Q9UPQ3 857 aa17.89■□□□□ 0.45
PTPRK-208ENST00000392449 PIAS3Q9Y6X2 628 aa17.89■□□□□ 0.45
PTPRK-208ENST00000392449 NUP210Q8TEM1 1887 aaPredicted RBP17.89■□□□□ 0.45
PTPRK-208ENST00000392449 ARNTLO00327 626 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 LAMTOR5O43504 91 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 HCRTO43612 131 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 SOX9P48436 509 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 GPR15P49685 360 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 SV2CQ496J9 727 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 ARID3BQ8IVW6 561 aaPredicted RBP17.88■□□□□ 0.45
PTPRK-208ENST00000392449 MFSD6LQ8IWD5 586 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 TTC8Q8TAM2 541 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 ZFYVE19Q96K21 471 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 SMG9Q9H0W8 520 aaKnown RBP17.88■□□□□ 0.45
PTPRK-208ENST00000392449 PDE11AQ9HCR9 933 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 PCDHB13Q9Y5F0 798 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 MORC2Q9Y6X9 1032 aaPredicted RBP17.88■□□□□ 0.45
PTPRK-208ENST00000392449 ZNF263O14978 683 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 SPTLC2O15270 562 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 PRAMEF12O95522 483 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 ACAT1P24752 427 aaKnown RBP17.88■□□□□ 0.45
PTPRK-208ENST00000392449 MTAPQ13126 283 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 E2F4Q16254 413 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 GPR158Q5T848 1215 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 THEM5Q8N1Q8 247 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 CXorf38Q8TB03 319 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms