RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 MCOLN2Q8IZK6 566 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 LRRC52Q8N7C0 313 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 COG1Q8WTW3 980 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 TMEM176AQ96HP8 235 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 BTBD6Q96KE9 485 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 RPS6KC1Q96S38 1066 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 C11orf70Q9BRQ4 267 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 BARX2Q9UMQ3 279 aaPredicted RBP12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 SNX12Q9UMY4 172 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 SCN5AQ14524 2016 aa12.98□□□□□ -0.33
SPTBN1-203ENST00000389980 CCDC66A2RUB6 948 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 XPOTO43592 962 aaKnown RBP12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 MNX1P50219 401 aaPredicted RBP12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 SLC20A2Q08357 652 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 IFI16Q16666 785 aaKnown RBP12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 SOWAHAQ2M3V2 549 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 MEI1Q5TIA1 1274 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 DENND1BQ6P3S1 775 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 MMS22LQ6ZRQ5 1243 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 LRRC8DQ7L1W4 858 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 HACE1Q8IYU2 909 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 USP38Q8NB14 1042 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 C1orf131Q8NDD1 294 aaKnown RBP12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 LINC01599Q8WXQ3 324 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 FAXDC2Q96IV6 333 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 LPIN3Q9BQK8 851 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 NUP85Q9BW27 656 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 EPC1Q9H2F5 836 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 CNOT8Q9UFF9 292 aaKnown RBP12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 INPP5FQ9Y2H2 1132 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 TMEM110-MUSTN1A8MSY1 372 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 KPNA7A9QM74 516 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 ZNF623O75123 536 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 POMCP01189 267 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 THP07101 528 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 CYP3A5P20815 502 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 RRM1P23921 792 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 INCA1Q0VD86 236 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 GPNMBQ14956 572 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 MON1BQ7L1V2 547 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 WDTC1Q8N5D0 677 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 C12orf29Q8N999 325 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 DIS3LQ8TF46 1054 aaKnown RBP12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 HEXIM2Q96MH2 286 aaKnown RBP12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 OSBPL9Q96SU4 736 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 PAAF1Q9BRP4 392 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 TSPYL2Q9H2G4 693 aaPredicted RBP12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 RSAD1Q9HA92 442 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 SMARCAL1Q9NZC9 954 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 EHD2Q9NZN4 543 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 GTF3C4Q9UKN8 822 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 GIT1Q9Y2X7 761 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 SQORQ9Y6N5 450 aa12.97□□□□□ -0.33
SPTBN1-203ENST00000389980 CASTOR2A6NHX0 329 aa12.96□□□□□ -0.33
SPTBN1-203ENST00000389980 NBNO60934 754 aa12.96□□□□□ -0.33
SPTBN1-203ENST00000389980 CYP1A2P05177 515 aa12.96□□□□□ -0.33
SPTBN1-203ENST00000389980 PAEPP09466 180 aa12.96□□□□□ -0.33
SPTBN1-203ENST00000389980 SELPP16109 830 aa12.96□□□□□ -0.33
SPTBN1-203ENST00000389980 TAF6P49848 677 aa12.96□□□□□ -0.33
SPTBN1-203ENST00000389980 RAB27AP51159 221 aa12.96□□□□□ -0.33
SPTBN1-203ENST00000389980 CLCNKBP51801 687 aa12.96□□□□□ -0.33
SPTBN1-203ENST00000389980 LILRA4P59901 499 aa12.96□□□□□ -0.33
SPTBN1-203ENST00000389980 TRIM72Q6ZMU5 477 aa12.96□□□□□ -0.33
SPTBN1-203ENST00000389980 ECHDC2Q86YB7 292 aa12.96□□□□□ -0.33
SPTBN1-203ENST00000389980 CPNE8Q86YQ8 564 aa12.96□□□□□ -0.33
SPTBN1-203ENST00000389980 RHOT2Q8IXI1 618 aa12.96□□□□□ -0.33
SPTBN1-203ENST00000389980 OR6B3Q8NGW1 331 aa12.96□□□□□ -0.33
SPTBN1-203ENST00000389980 ZNF564Q8TBZ8 553 aaPredicted RBP12.96□□□□□ -0.33
SPTBN1-203ENST00000389980 CAGE1Q8TC20 777 aa12.96□□□□□ -0.33
SPTBN1-203ENST00000389980 TRAIPQ9BWF2 469 aa12.96□□□□□ -0.33
SPTBN1-203ENST00000389980 TRIM7Q9C029 511 aa12.96□□□□□ -0.33
SPTBN1-203ENST00000389980 ADAM22Q9P0K1 906 aa12.96□□□□□ -0.33
SPTBN1-203ENST00000389980 PDE2AO00408 941 aaPredicted RBP12.96□□□□□ -0.34
SPTBN1-203ENST00000389980 GJB6O95452 261 aa12.96□□□□□ -0.34
SPTBN1-203ENST00000389980 PDGFRBP09619 1106 aa12.96□□□□□ -0.34
SPTBN1-203ENST00000389980 FGFR1P11362 822 aa12.96□□□□□ -0.34
SPTBN1-203ENST00000389980 CDR1P51861 262 aa12.96□□□□□ -0.34
SPTBN1-203ENST00000389980 PTP4A2Q12974 167 aa12.96□□□□□ -0.34
SPTBN1-203ENST00000389980 FBXO38Q6PIJ6 1188 aa12.96□□□□□ -0.34
SPTBN1-203ENST00000389980 PEX26Q7Z412 305 aa12.96□□□□□ -0.34
SPTBN1-203ENST00000389980 SLFN11Q7Z7L1 901 aa12.96□□□□□ -0.34
SPTBN1-203ENST00000389980 ACOT1Q86TX2 421 aa12.96□□□□□ -0.34
SPTBN1-203ENST00000389980 C3orf58Q8NDZ4 430 aa12.96□□□□□ -0.34
SPTBN1-203ENST00000389980 KBTBD7Q8WVZ9 684 aa12.96□□□□□ -0.34
SPTBN1-203ENST00000389980 ZNF333Q96JL9 665 aa12.96□□□□□ -0.34
SPTBN1-203ENST00000389980 ZNF560Q96MR9 790 aa12.96□□□□□ -0.34
SPTBN1-203ENST00000389980 TSPAN18Q96SJ8 248 aa12.96□□□□□ -0.34
SPTBN1-203ENST00000389980 NT5C1AQ9BXI3 368 aa12.96□□□□□ -0.34
SPTBN1-203ENST00000389980 DPEP3Q9H4B8 488 aa12.96□□□□□ -0.34
SPTBN1-203ENST00000389980 CYTH4Q9UIA0 394 aa12.96□□□□□ -0.34
SPTBN1-203ENST00000389980 L1RE1Q9UN81 338 aa12.96□□□□□ -0.34
SPTBN1-203ENST00000389980 SPDYE4A6NLX3 237 aa12.95□□□□□ -0.34
SPTBN1-203ENST00000389980 TADA3O75528 432 aa12.95□□□□□ -0.34
SPTBN1-203ENST00000389980 LMO2P25791 158 aa12.95□□□□□ -0.34
SPTBN1-203ENST00000389980 LRPAP1P30533 357 aa12.95□□□□□ -0.34
SPTBN1-203ENST00000389980 MESDQ14696 234 aa12.95□□□□□ -0.34
SPTBN1-203ENST00000389980 ZNF598Q86UK7 904 aaKnown RBP12.95□□□□□ -0.34
SPTBN1-203ENST00000389980 NT5DC3Q86UY8 548 aa12.95□□□□□ -0.34
SPTBN1-203ENST00000389980 IPO4Q8TEX9 1081 aaKnown RBP12.95□□□□□ -0.34
SPTBN1-203ENST00000389980 SCLYQ96I15 445 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms