RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 TMEM59LQ9UK28 342 aa10.8□□□□□ -0.68
LTN1-203ENST00000389195 R3HDM2Q9Y2K5 976 aaKnown RBP10.8□□□□□ -0.68
LTN1-203ENST00000389195 FAN1Q9Y2M0 1017 aa10.8□□□□□ -0.68
LTN1-203ENST00000389195 SIP14410 1827 aa10.8□□□□□ -0.68
LTN1-203ENST00000389195 ASAP2O43150 1006 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 KRT14P02533 472 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 RARAP10276 462 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 CYP3A5P20815 502 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 RGS2P41220 211 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 NDST1P52848 882 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 ZNF252P-AS1Q0IIN9 211 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 PTP4A2Q12974 167 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 SNX17Q15036 470 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 PTPN20Q4JDL3 420 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 GDF6Q6KF10 455 aaPredicted RBP10.79□□□□□ -0.68
LTN1-203ENST00000389195 PRELID2Q8N945 189 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 B3GNT5Q9BYG0 378 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 MAGEB5Q9BZ81 275 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 SNX24Q9Y343 169 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 TIMM13Q9Y5L4 95 aaPredicted RBP10.79□□□□□ -0.68
LTN1-203ENST00000389195 CITO14578 2027 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 AGPSO00116 658 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 SPTLC1O15269 473 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 ZC3H11AO75152 810 aaKnown RBP eCLIP10.79□□□□□ -0.68
LTN1-203ENST00000389195 ERLIN1O75477 346 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 RFC1P35251 1148 aaPredicted RBP10.79□□□□□ -0.68
LTN1-203ENST00000389195 MCCD1P59942 119 aaPredicted RBP10.79□□□□□ -0.68
LTN1-203ENST00000389195 CENPCQ03188 943 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 CACNB2Q08289 660 aaPredicted RBP10.79□□□□□ -0.68
LTN1-203ENST00000389195 SLC4A11Q8NBS3 891 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 ACTRT1Q8TDG2 376 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 CD101Q93033 1021 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 PAAF1Q9BRP4 392 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 CHST7Q9NS84 486 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 PCSK1NQ9UHG2 260 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 HPCAL4Q9UM19 191 aa10.79□□□□□ -0.68
LTN1-203ENST00000389195 I3L4J1 428 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 MAP3K6O95382 1288 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 RARBP10826 455 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 ACAT1P24752 427 aaKnown RBP10.78□□□□□ -0.68
LTN1-203ENST00000389195 ZNF132P52740 706 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 NRLP54845 237 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 TWF2Q6IBS0 349 aaKnown RBP10.78□□□□□ -0.68
LTN1-203ENST00000389195 ENOSF1Q7L5Y1 443 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 CTU1Q7Z7A3 348 aaKnown RBP10.78□□□□□ -0.68
LTN1-203ENST00000389195 CCDC33Q8N5R6 958 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 UBR7Q8N806 425 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 AENQ8WTP8 325 aaKnown RBP10.78□□□□□ -0.68
LTN1-203ENST00000389195 MAGOHBQ96A72 148 aaKnown RBP10.78□□□□□ -0.68
LTN1-203ENST00000389195 PBKQ96KB5 322 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 ADPGKQ9BRR6 497 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 GCOM2Q9BZD3 368 aaPredicted RBP10.78□□□□□ -0.68
LTN1-203ENST00000389195 NRCAMQ92823 1304 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 PASKQ96RG2 1323 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 ERICH4A6NGS2 130 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 KIAA0391O15091 583 aaKnown RBP10.78□□□□□ -0.68
LTN1-203ENST00000389195 ATP2C2O75185 946 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 DARSP14868 501 aaKnown RBP10.78□□□□□ -0.68
LTN1-203ENST00000389195 ECHS1P30084 290 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 DYNLT1P63172 113 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 CDO1Q16878 200 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 ZNF572Q7Z3I7 529 aaPredicted RBP10.78□□□□□ -0.68
LTN1-203ENST00000389195 HASPINQ8TF76 798 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 APBA2Q99767 749 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 CENPHQ9H3R5 247 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 ZWILCHQ9H900 591 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 TRMT13Q9NUP7 481 aaKnown RBP10.78□□□□□ -0.68
LTN1-203ENST00000389195 F8W810 466 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 M0QYV0 167 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 SYF2O95926 243 aaKnown RBP10.78□□□□□ -0.68
LTN1-203ENST00000389195 ERBB2P04626 1255 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 MCF2P10911 925 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 RALAP11233 206 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 TBXAS1P24557 533 aaPredicted RBP10.78□□□□□ -0.68
LTN1-203ENST00000389195 ANXA13P27216 316 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 DHX9Q08211 1270 aaKnown RBP10.78□□□□□ -0.68
LTN1-203ENST00000389195 SYCP2LQ5T4T6 812 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 DCUN1D2Q6PH85 259 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 SH2D3CQ8N5H7 860 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 NETO2Q8NC67 525 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 CLEC4CQ8WTT0 213 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 HNRNPLLQ8WVV9 542 aaKnown RBP10.78□□□□□ -0.68
LTN1-203ENST00000389195 RPGRIP1Q96KN7 1286 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 AGO3Q9H9G7 860 aaKnown RBP10.78□□□□□ -0.68
LTN1-203ENST00000389195 MRPL42Q9Y6G3 142 aaKnown RBP10.78□□□□□ -0.68
LTN1-203ENST00000389195 TLL2Q9Y6L7 1015 aa10.78□□□□□ -0.68
LTN1-203ENST00000389195 C17orf102A2RUQ5 167 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 KIF3CO14782 793 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 CD48P09326 243 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 HOXD8P13378 290 aaPredicted RBP10.77□□□□□ -0.69
LTN1-203ENST00000389195 ATF7P17544 494 aaPredicted RBP10.77□□□□□ -0.69
LTN1-203ENST00000389195 MMP8P22894 467 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 PSMC1P62191 440 aaKnown RBP10.77□□□□□ -0.69
LTN1-203ENST00000389195 ADAM17P78536 824 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 PPP1R26Q5T8A7 1209 aaPredicted RBP10.77□□□□□ -0.69
LTN1-203ENST00000389195 CCDC70Q6NSX1 233 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 ERICH1Q86X53 443 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 SCUBE3Q8IX30 993 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 RASGEF1CQ8N431 466 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 MIS12Q9H081 205 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms