RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 C1orf146Q5VVC0 180 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 LPCAT4Q643R3 524 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 SLC30A10Q6XR72 485 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 ABTB1Q969K4 478 aaPredicted RBP15.78■□□□□ 0.12
CTNS-202ENST00000381870 P2RX7Q99572 595 aaKnown RBP15.78■□□□□ 0.12
CTNS-202ENST00000381870 MTMR4Q9NYA4 1195 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 ABCA3Q99758 1704 aa15.78■□□□□ 0.12
CTNS-202ENST00000381870 CYP3A7-CYP3A51PA0A087WV96 503 aa15.77■□□□□ 0.12
CTNS-202ENST00000381870 ATP9BO43861 1147 aa15.77■□□□□ 0.12
CTNS-202ENST00000381870 STK10O94804 968 aaKnown RBP15.77■□□□□ 0.12
CTNS-202ENST00000381870 GAP43P17677 238 aa15.77■□□□□ 0.12
CTNS-202ENST00000381870 CYP3A7P24462 503 aa15.77■□□□□ 0.12
CTNS-202ENST00000381870 CRKLP46109 303 aaKnown RBP15.77■□□□□ 0.12
CTNS-202ENST00000381870 SH3BGRP55822 239 aaPredicted RBP15.77■□□□□ 0.12
CTNS-202ENST00000381870 KDSRQ06136 332 aa15.77■□□□□ 0.12
CTNS-202ENST00000381870 DLG1Q12959 904 aa15.77■□□□□ 0.12
CTNS-202ENST00000381870 GRM2Q14416 872 aa15.77■□□□□ 0.12
CTNS-202ENST00000381870 CCNG2Q16589 344 aa15.77■□□□□ 0.12
CTNS-202ENST00000381870 LLGL2Q6P1M3 1020 aa15.77■□□□□ 0.12
CTNS-202ENST00000381870 DUS1LQ6P1R4 473 aaKnown RBP15.77■□□□□ 0.12
CTNS-202ENST00000381870 CCDC174Q6PII3 467 aa15.77■□□□□ 0.12
CTNS-202ENST00000381870 SLC51AQ86UW1 340 aa15.77■□□□□ 0.12
CTNS-202ENST00000381870 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.77■□□□□ 0.12
CTNS-202ENST00000381870 FIZ1Q96SL8 496 aa15.77■□□□□ 0.12
CTNS-202ENST00000381870 RANBP17Q9H2T7 1088 aaKnown RBP15.77■□□□□ 0.12
CTNS-202ENST00000381870 PCIF1Q9H4Z3 704 aa15.77■□□□□ 0.12
CTNS-202ENST00000381870 VILLO15195 856 aa15.77■□□□□ 0.11
CTNS-202ENST00000381870 TM7SF2O76062 418 aa15.77■□□□□ 0.11
CTNS-202ENST00000381870 SNHG28P0DPA3 235 aa15.77■□□□□ 0.11
CTNS-202ENST00000381870 PPP4CP60510 307 aa15.77■□□□□ 0.11
CTNS-202ENST00000381870 ZNF543Q08ER8 600 aa15.77■□□□□ 0.11
CTNS-202ENST00000381870 DLGAP5Q15398 846 aa15.77■□□□□ 0.11
CTNS-202ENST00000381870 ISLR2Q6UXK2 745 aa15.77■□□□□ 0.11
CTNS-202ENST00000381870 KCTD1Q719H9 257 aa15.77■□□□□ 0.11
CTNS-202ENST00000381870 FAM71AQ8IYT1 594 aa15.77■□□□□ 0.11
CTNS-202ENST00000381870 KREMEN1Q96MU8 473 aa15.77■□□□□ 0.11
CTNS-202ENST00000381870 VPS11Q9H270 941 aa15.77■□□□□ 0.11
CTNS-202ENST00000381870 DDX18Q9NVP1 670 aaKnown RBP15.77■□□□□ 0.11
CTNS-202ENST00000381870 CIDEBQ9UHD4 219 aa15.77■□□□□ 0.11
CTNS-202ENST00000381870 SLC24A2Q9UI40 661 aa15.77■□□□□ 0.11
CTNS-202ENST00000381870 SMIM31A0A1B0GVY4 71 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 TISP43B9A030 160 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 E5RJQ4 531 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 DNALI1O14645 258 aaPredicted RBP15.76■□□□□ 0.11
CTNS-202ENST00000381870 RAD21O60216 631 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 AQP4P55087 323 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 GPX6P59796 221 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 Q4G0T1 1027 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 C6orf163Q5TEZ5 329 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 RNF111Q6ZNA4 994 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 ZNF720Q7Z2F6 126 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 PYDC1Q8WXC3 89 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 ELMO3Q96BJ8 720 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 MBOAT7Q96N66 472 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 POLR3CQ9BUI4 534 aaPredicted RBP15.76■□□□□ 0.11
CTNS-202ENST00000381870 SUDS3Q9H7L9 328 aaPredicted RBP15.76■□□□□ 0.11
CTNS-202ENST00000381870 USP21Q9UK80 565 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 ZBTB5O15062 677 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 UQCRBP14927 111 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 BGNP21810 368 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 BTDP43251 543 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 GEMIN4P57678 1058 aaKnown RBP15.76■□□□□ 0.11
CTNS-202ENST00000381870 PRKD1Q15139 912 aaPredicted RBP15.76■□□□□ 0.11
CTNS-202ENST00000381870 EPC2Q52LR7 807 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 C2CD6Q53TS8 623 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 RBM44Q6ZP01 1051 aaKnown RBP15.76■□□□□ 0.11
CTNS-202ENST00000381870 BANPQ8N9N5 519 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 GSTCDQ8NEC7 633 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 SNRNP27Q8WVK2 155 aaKnown RBP15.76■□□□□ 0.11
CTNS-202ENST00000381870 MTBPQ96DY7 904 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 CLMNQ96JQ2 1002 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 EIF2AK1Q9BQI3 630 aaKnown RBP15.76■□□□□ 0.11
CTNS-202ENST00000381870 RTFDC1Q9BY42 306 aaPredicted RBP15.76■□□□□ 0.11
CTNS-202ENST00000381870 PARVGQ9HBI0 331 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 SSU72Q9NP77 194 aaKnown RBP15.76■□□□□ 0.11
CTNS-202ENST00000381870 ZDHHC7Q9NXF8 308 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 PTTG2Q9NZH5 202 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 DNAJB4Q9UDY4 337 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 LAMB2P55268 1798 aa15.76■□□□□ 0.11
CTNS-202ENST00000381870 CAPN14A8MX76 684 aa15.75■□□□□ 0.11
CTNS-202ENST00000381870 FAM86B1E9PN63 330 aa15.75■□□□□ 0.11
CTNS-202ENST00000381870 GOLGA8SH3BPF8 625 aa15.75■□□□□ 0.11
CTNS-202ENST00000381870 GOLGA8MH3BSY2 632 aa15.75■□□□□ 0.11
CTNS-202ENST00000381870 FAM86B2P0C5J1 330 aa15.75■□□□□ 0.11
CTNS-202ENST00000381870 PIM1P11309 404 aaPredicted RBP15.75■□□□□ 0.11
CTNS-202ENST00000381870 VCLP18206 1134 aa15.75■□□□□ 0.11
CTNS-202ENST00000381870 ABCD1P33897 745 aa15.75■□□□□ 0.11
CTNS-202ENST00000381870 GJC1P36383 396 aa15.75■□□□□ 0.11
CTNS-202ENST00000381870 SLC1A1P43005 524 aa15.75■□□□□ 0.11
CTNS-202ENST00000381870 ARHGAP4P98171 946 aa15.75■□□□□ 0.11
CTNS-202ENST00000381870 MTMR2Q13614 643 aa15.75■□□□□ 0.11
CTNS-202ENST00000381870 CCDC142Q17RM4 750 aa15.75■□□□□ 0.11
CTNS-202ENST00000381870 FAM98CQ17RN3 349 aaKnown RBP15.75■□□□□ 0.11
CTNS-202ENST00000381870 TMCO4Q5TGY1 634 aa15.75■□□□□ 0.11
CTNS-202ENST00000381870 PPM1KQ8N3J5 372 aa15.75■□□□□ 0.11
CTNS-202ENST00000381870 LARGE2Q8N3Y3 721 aa15.75■□□□□ 0.11
CTNS-202ENST00000381870 FAM172AQ8WUF8 416 aa15.75■□□□□ 0.11
CTNS-202ENST00000381870 LENG9Q96B70 501 aa15.75■□□□□ 0.11
CTNS-202ENST00000381870 DGCR14Q96DF8 476 aaKnown RBP15.75■□□□□ 0.11
CTNS-202ENST00000381870 FOXP3Q9BZS1 431 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms