RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 MON1BQ7L1V2 547 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 DNPEPQ9ULA0 475 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 HLA-DRAP01903 254 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 GJB1P08034 283 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 ERP27Q96DN0 273 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 MSTO1Q9BUK6 570 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 EXOC1LA0A1B0GW35 172 aa17.19■□□□□ 0.34
NKX3-1-201ENST00000380871 SPATA31C2B4DYI2 1134 aa17.19■□□□□ 0.34
NKX3-1-201ENST00000380871 CSDE1O75534 798 aaKnown RBP17.19■□□□□ 0.34
NKX3-1-201ENST00000380871 TARSP26639 723 aaKnown RBP17.19■□□□□ 0.34
NKX3-1-201ENST00000380871 KLRC2P26717 231 aa17.19■□□□□ 0.34
NKX3-1-201ENST00000380871 TRAPPC12Q8WVT3 735 aa17.19■□□□□ 0.34
NKX3-1-201ENST00000380871 MAML1Q92585 1016 aa17.19■□□□□ 0.34
NKX3-1-201ENST00000380871 ZNF112Q9UJU3 913 aa17.19■□□□□ 0.34
NKX3-1-201ENST00000380871 AFG3L2Q9Y4W6 797 aa17.19■□□□□ 0.34
NKX3-1-201ENST00000380871 CSADQ9Y600 493 aa17.19■□□□□ 0.34
NKX3-1-201ENST00000380871 GLRA2P23416 452 aa17.19■□□□□ 0.34
NKX3-1-201ENST00000380871 RPL7AP62424 266 aaKnown RBP17.19■□□□□ 0.34
NKX3-1-201ENST00000380871 MAMLD1Q13495 774 aa17.19■□□□□ 0.34
NKX3-1-201ENST00000380871 PKN2Q16513 984 aaKnown RBP17.19■□□□□ 0.34
NKX3-1-201ENST00000380871 FAM182AQ5T1J6 154 aa17.19■□□□□ 0.34
NKX3-1-201ENST00000380871 TMEM270Q6UE05 265 aa17.19■□□□□ 0.34
NKX3-1-201ENST00000380871 FBXL18Q96ME1 805 aa17.19■□□□□ 0.34
NKX3-1-201ENST00000380871 PCDHB4Q9Y5E5 795 aa17.19■□□□□ 0.34
NKX3-1-201ENST00000380871 DKC1O60832 514 aaKnown RBP eCLIP17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 TCEA3O75764 348 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 ATF7P17544 494 aaPredicted RBP17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 SYDE1Q6ZW31 735 aaPredicted RBP17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 GBP7Q8N8V2 638 aaPredicted RBP17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 AVENQ9NQS1 362 aaPredicted RBP17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 RBAKQ9NYW8 714 aaPredicted RBP17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 FAM47DPA6NHR8 397 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 GOLGA8SH3BPF8 625 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 GOLGA8MH3BSY2 632 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 IRF6O14896 467 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 OATP04181 439 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 FGFR1P11362 822 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 GHRHRQ02643 423 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 GCNT1Q02742 428 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 TDRD10Q5VZ19 366 aaKnown RBP17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 TAB3Q8N5C8 712 aaPredicted RBP17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 CCDC89Q8N998 374 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 TMC2Q8TDI7 906 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 RSRC1Q96IZ7 334 aaKnown RBP17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 CDHR1Q96JP9 859 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 C10orf88Q9H8K7 445 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 KIAA1586Q9HCI6 787 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 NOP53Q9NZM5 478 aaKnown RBP17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 PCDHB2Q9Y5E7 798 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 UBA1P22314 1058 aaKnown RBP17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 IGBP1P78318 339 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 CENPCQ03188 943 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 CCNG2Q16589 344 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 TXNRD3NBQ6F5E7 133 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 TMEM130Q8N3G9 435 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 TIPINQ9BVW5 301 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 HAPLN2Q9GZV7 340 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 APOBEC3GQ9HC16 384 aaKnown RBP17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 NKX1-2Q9UD57 310 aaPredicted RBP17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 HAO1Q9UJM8 370 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 CHKBQ9Y259 395 aa17.18■□□□□ 0.34
NKX3-1-201ENST00000380871 MAFGO15525 162 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 UNC5CO95185 931 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 EDN1P05305 212 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 PECAM1P16284 738 aaPredicted RBP17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 MAN1A1P33908 653 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 RPA3P35244 121 aaPredicted RBP17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 GAD2Q05329 585 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 MKRN3Q13064 507 aaKnown RBP17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 BRDTQ58F21 947 aaPredicted RBP17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 USP37Q86T82 979 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 SULF1Q8IWU6 871 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 RHOT1Q8IXI2 618 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 OR5B17Q8NGF7 314 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 SPIRE2Q8WWL2 714 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 DOCK5Q9H7D0 1870 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 ASMTLO95671 621 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 CYP1A1P04798 512 aaPredicted RBP17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 TNFSF9P41273 254 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 SLC1A1P43005 524 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 STAT5BP51692 787 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 CAV1Q03135 178 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 SCARA5Q6ZMJ2 495 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 TRABD2AQ86V40 505 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 COPS5Q92905 334 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 C12orf65Q9H3J6 166 aaKnown RBP17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 PHTF1Q9UMS5 762 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 SNCAIPQ9Y6H5 919 aa17.17■□□□□ 0.34
NKX3-1-201ENST00000380871 A0A1W2PPM1 405 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 TLR3O15455 904 aaKnown RBP17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 CCNB1P14635 433 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 TCF7P36402 384 aaPredicted RBP17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 RNF43Q68DV7 783 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 ZNF449Q6P9G9 518 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 ZCCHC9Q8N567 271 aaKnown RBP17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 SAMD3Q8N6K7 520 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 GINM1Q9NU53 330 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 VNN1O95497 513 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 NOMO3P69849 1222 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms