RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 DNAJB7Q7Z6W7 309 aaPredicted RBP18.24■□□□□ 0.51
SMN2-201ENST00000380741 DCLK2Q8N568 766 aa18.24■□□□□ 0.51
SMN2-201ENST00000380741 ZBTB44Q8NCP5 570 aa18.24■□□□□ 0.51
SMN2-201ENST00000380741 ATRIPQ8WXE1 791 aa18.24■□□□□ 0.51
SMN2-201ENST00000380741 POMGNT1Q8WZA1 660 aa18.24■□□□□ 0.51
SMN2-201ENST00000380741 PSMG2Q969U7 264 aa18.24■□□□□ 0.51
SMN2-201ENST00000380741 HVCN1Q96D96 273 aa18.24■□□□□ 0.51
SMN2-201ENST00000380741 CLIC6Q96NY7 704 aa18.24■□□□□ 0.51
SMN2-201ENST00000380741 PRMT8Q9NR22 394 aaPredicted RBP18.24■□□□□ 0.51
SMN2-201ENST00000380741 DPP3Q9NY33 737 aa18.24■□□□□ 0.51
SMN2-201ENST00000380741 ASB3Q9Y575 518 aa18.24■□□□□ 0.51
SMN2-201ENST00000380741 SRPRBQ9Y5M8 271 aaKnown RBP18.24■□□□□ 0.51
SMN2-201ENST00000380741 MYMKA6NI61 221 aa18.23■□□□□ 0.51
SMN2-201ENST00000380741 TAF6P49848 677 aa18.23■□□□□ 0.51
SMN2-201ENST00000380741 KCNA1Q09470 495 aa18.23■□□□□ 0.51
SMN2-201ENST00000380741 RESTQ13127 1097 aa18.23■□□□□ 0.51
SMN2-201ENST00000380741 GPIHBP1Q8IV16 184 aa18.23■□□□□ 0.51
SMN2-201ENST00000380741 EFCAB13Q8IY85 973 aa18.23■□□□□ 0.51
SMN2-201ENST00000380741 FAM3CQ92520 227 aa18.23■□□□□ 0.51
SMN2-201ENST00000380741 NELL1Q92832 810 aa18.23■□□□□ 0.51
SMN2-201ENST00000380741 E2F7Q96AV8 911 aa18.23■□□□□ 0.51
SMN2-201ENST00000380741 SEPT5Q99719 369 aaPredicted RBP18.23■□□□□ 0.51
SMN2-201ENST00000380741 PYM1Q9BRP8 204 aaKnown RBP18.23■□□□□ 0.51
SMN2-201ENST00000380741 MKNK1Q9BUB5 465 aa18.23■□□□□ 0.51
SMN2-201ENST00000380741 STRA6Q9BX79 667 aa18.23■□□□□ 0.51
SMN2-201ENST00000380741 ZCWPW1Q9H0M4 648 aa18.23■□□□□ 0.51
SMN2-201ENST00000380741 CHRDQ9H2X0 955 aa18.23■□□□□ 0.51
SMN2-201ENST00000380741 MRPL44Q9H9J2 332 aaKnown RBP18.23■□□□□ 0.51
SMN2-201ENST00000380741 ZSCAN32Q9NX65 697 aa18.23■□□□□ 0.51
SMN2-201ENST00000380741 HSFX1Q9UBD0 423 aa18.23■□□□□ 0.51
SMN2-201ENST00000380741 DSEQ9UL01 958 aa18.23■□□□□ 0.51
SMN2-201ENST00000380741 CYB561D2O14569 222 aa18.22■□□□□ 0.51
SMN2-201ENST00000380741 GABRR2P28476 465 aa18.22■□□□□ 0.51
SMN2-201ENST00000380741 POU5F1Q01860 360 aaKnown RBP18.22■□□□□ 0.51
SMN2-201ENST00000380741 CEBPZQ03701 1054 aaKnown RBP18.22■□□□□ 0.51
SMN2-201ENST00000380741 FCHO2Q0JRZ9 810 aa18.22■□□□□ 0.51
SMN2-201ENST00000380741 RRAGBQ5VZM2 374 aa18.22■□□□□ 0.51
SMN2-201ENST00000380741 ERMP1Q7Z2K6 904 aa18.22■□□□□ 0.51
SMN2-201ENST00000380741 ITIH5Q86UX2 942 aa18.22■□□□□ 0.51
SMN2-201ENST00000380741 ARID3BQ8IVW6 561 aaPredicted RBP18.22■□□□□ 0.51
SMN2-201ENST00000380741 YAF2Q8IY57 180 aa18.22■□□□□ 0.51
SMN2-201ENST00000380741 DNAJC19Q96DA6 116 aa18.22■□□□□ 0.51
SMN2-201ENST00000380741 BORCS6Q96GS4 357 aa18.22■□□□□ 0.51
SMN2-201ENST00000380741 LPIN3Q9BQK8 851 aa18.22■□□□□ 0.51
SMN2-201ENST00000380741 ATXN3LQ9H3M9 355 aa18.22■□□□□ 0.51
SMN2-201ENST00000380741 TBC1D7Q9P0N9 293 aa18.22■□□□□ 0.51
SMN2-201ENST00000380741 SEL1LQ9UBV2 794 aa18.22■□□□□ 0.51
SMN2-201ENST00000380741 DENND4CQ5VZ89 1909 aa18.21■□□□□ 0.51
SMN2-201ENST00000380741 KIF26AQ9ULI4 1882 aaPredicted RBP18.21■□□□□ 0.51
SMN2-201ENST00000380741 CHADO15335 359 aa18.21■□□□□ 0.51
SMN2-201ENST00000380741 GAP43P17677 238 aa18.21■□□□□ 0.51
SMN2-201ENST00000380741 ATF6P18850 670 aa18.21■□□□□ 0.51
SMN2-201ENST00000380741 SYT1P21579 422 aa18.21■□□□□ 0.51
SMN2-201ENST00000380741 CCNE1P24864 410 aa18.21■□□□□ 0.51
SMN2-201ENST00000380741 TXLNAP40222 546 aa18.21■□□□□ 0.51
SMN2-201ENST00000380741 WNT7BP56706 349 aa18.21■□□□□ 0.51
SMN2-201ENST00000380741 MGAT5BQ3V5L5 792 aa18.21■□□□□ 0.51
SMN2-201ENST00000380741 GPR158Q5T848 1215 aa18.21■□□□□ 0.51
SMN2-201ENST00000380741 WSCD1Q658N2 575 aa18.21■□□□□ 0.51
SMN2-201ENST00000380741 SV2BQ7L1I2 683 aa18.21■□□□□ 0.51
SMN2-201ENST00000380741 METTL23Q86XA0 190 aa18.21■□□□□ 0.51
SMN2-201ENST00000380741 ZSWIM2Q8NEG5 633 aa18.21■□□□□ 0.51
SMN2-201ENST00000380741 FAM200AQ8TCP9 573 aa18.21■□□□□ 0.51
SMN2-201ENST00000380741 CSGALNACT1Q8TDX6 532 aa18.21■□□□□ 0.51
SMN2-201ENST00000380741 RMDN1Q96DB5 314 aa18.21■□□□□ 0.51
SMN2-201ENST00000380741 LRRC3BQ96PB8 259 aa18.21■□□□□ 0.51
SMN2-201ENST00000380741 LMAN1LQ9HAT1 526 aa18.21■□□□□ 0.51
SMN2-201ENST00000380741 SLC38A8A6NNN8 435 aa18.2■□□□□ 0.5
SMN2-201ENST00000380741 LILRB5O75023 590 aa18.2■□□□□ 0.5
SMN2-201ENST00000380741 IL18RAPO95256 599 aa18.2■□□□□ 0.5
SMN2-201ENST00000380741 FGF19O95750 216 aa18.2■□□□□ 0.5
SMN2-201ENST00000380741 TDGF1P13385 188 aa18.2■□□□□ 0.5
SMN2-201ENST00000380741 TUFMP49411 452 aaKnown RBP18.2■□□□□ 0.5
SMN2-201ENST00000380741 CASP5P51878 434 aa18.2■□□□□ 0.5
SMN2-201ENST00000380741 POSTNQ15063 836 aa18.2■□□□□ 0.5
SMN2-201ENST00000380741 L1TD1Q5T7N2 865 aaKnown RBP18.2■□□□□ 0.5
SMN2-201ENST00000380741 LRRTM3Q86VH5 581 aa18.2■□□□□ 0.5
SMN2-201ENST00000380741 THEM5Q8N1Q8 247 aa18.2■□□□□ 0.5
SMN2-201ENST00000380741 ACCSQ96QU6 501 aa18.2■□□□□ 0.5
SMN2-201ENST00000380741 EXOC7Q9UPT5 735 aa18.2■□□□□ 0.5
SMN2-201ENST00000380741 KPNA7A9QM74 516 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 OBSL1O75147 1896 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 GCNT3O95395 438 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 PRAMEF12O95522 483 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 CHRNB1P11230 501 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 SOX9P48436 509 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 MLLT6P55198 1093 aaPredicted RBP18.19■□□□□ 0.5
SMN2-201ENST00000380741 CYP4F8P98187 520 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 VEPH1Q14D04 833 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 SV2CQ496J9 727 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 ARHGAP15Q53QZ3 475 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 MAMSTRQ6ZN01 415 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 CCDC73Q6ZRK6 1079 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 NT5DC4Q86YG4 428 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 C2orf15Q8WU43 125 aaKnown RBP18.19■□□□□ 0.5
SMN2-201ENST00000380741 SAAL1Q96ER3 474 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 MSANTD3Q96H12 275 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 ZFYVE19Q96K21 471 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 ZNF560Q96MR9 790 aa18.19■□□□□ 0.5
SMN2-201ENST00000380741 FAM213AQ9BRX8 229 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms