RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 CA8P35219 290 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 KLK7P49862 253 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 YWHAHQ04917 246 aaPredicted RBP13.56□□□□□ -0.24
SMN1-202ENST00000380707 SMC1AQ14683 1233 aaKnown RBP13.56□□□□□ -0.24
SMN1-202ENST00000380707 NR1I3Q14994 352 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 PSMD5Q16401 504 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 PTPN21Q16825 1174 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 FKBP15Q5T1M5 1219 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 RSPO2Q6UXX9 243 aaPredicted RBP13.56□□□□□ -0.24
SMN1-202ENST00000380707 RRAGAQ7L523 313 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 OSTM1Q86WC4 334 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 ARHGEF19Q8IW93 802 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 ADGRF2Q8IZF7 708 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 TMEM86AQ8N2M4 240 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 DEFB123Q8N688 67 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 NT5C1BQ96P26 610 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 RTP3Q9BQQ7 232 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 SIX2Q9NPC8 291 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 IRAK3Q9Y616 596 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 ARHGEF37A1IGU5 675 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 GABRDO14764 452 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 ADAM12O43184 909 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 HCRTO43612 131 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 TBC1D4O60343 1298 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 LMO2P25791 158 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 UBASH3AP57075 661 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 CUL2Q13617 745 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 BMS1Q14692 1282 aaKnown RBP13.55□□□□□ -0.24
SMN1-202ENST00000380707 SYCP1Q15431 976 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 PTPROQ16827 1216 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 FILIP1LQ4L180 1135 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 PDE12Q6L8Q7 609 aaKnown RBP13.55□□□□□ -0.24
SMN1-202ENST00000380707 GJB7Q6PEY0 223 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 ANKS3Q6ZW76 656 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 METTL23Q86XA0 190 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 GPR65Q8IYL9 337 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 PPM1KQ8N3J5 372 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 KAT5Q92993 513 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 ERGIC2Q96RQ1 377 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 CLSTN3Q9BQT9 956 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 IFNKQ9P0W0 207 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 SIK3Q9Y2K2 1263 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 NME7Q9Y5B8 376 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 TSC2P49815 1807 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 C5orf42Q9H799 3197 aa13.55□□□□□ -0.24
SMN1-202ENST00000380707 TEX28O15482 410 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 AP5Z1O43299 807 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 CNPP09543 421 aaKnown RBP13.54□□□□□ -0.24
SMN1-202ENST00000380707 CD58P19256 250 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 WARSP23381 471 aaKnown RBP13.54□□□□□ -0.24
SMN1-202ENST00000380707 GNL1P36915 607 aaPredicted RBP13.54□□□□□ -0.24
SMN1-202ENST00000380707 CTXN3Q4LDR2 81 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 ZNF280DQ6N043 979 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 PDXDC1Q6P996 788 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 ADGRD2Q7Z7M1 963 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 GLYCTKQ8IVS8 523 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 OR10T2Q8NGX3 314 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 FAXDC2Q96IV6 333 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 GUCD1Q96NT3 240 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 CDX2Q99626 313 aaPredicted RBP13.54□□□□□ -0.24
SMN1-202ENST00000380707 LSM14BQ9BX40 385 aaKnown RBP13.54□□□□□ -0.24
SMN1-202ENST00000380707 CYP3A43Q9HB55 503 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 RXFP1Q9HBX9 757 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 UBE2TQ9NPD8 197 aaPredicted RBP13.54□□□□□ -0.24
SMN1-202ENST00000380707 DDX43Q9NXZ2 648 aaKnown RBP13.54□□□□□ -0.24
SMN1-202ENST00000380707 FNIP2Q9P278 1114 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 MTRRQ9UBK8 725 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 APEX2Q9UBZ4 518 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 FBXL5Q9UKA1 691 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 SSX2IPQ9Y2D8 614 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 BACE2Q9Y5Z0 518 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 MTCH2Q9Y6C9 303 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 CDY1Q9Y6F8 540 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 ATG2AQ2TAZ0 1938 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 H7C4K7 107 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 NOL4O94818 638 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 PDGFRBP09619 1106 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 FAM163BP0C2L3 166 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 POU3F3P20264 500 aaPredicted RBP13.54□□□□□ -0.24
SMN1-202ENST00000380707 IGFBP4P22692 258 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 ACAT1P24752 427 aaKnown RBP13.54□□□□□ -0.24
SMN1-202ENST00000380707 LHX1P48742 406 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 GCNT1Q02742 428 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 KLHDC7AQ5VTJ3 777 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 OR6B3Q8NGW1 331 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 SPATA18Q8TC71 538 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 KREMEN1Q96MU8 473 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 TMEM209Q96SK2 561 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 XPO4Q9C0E2 1151 aaKnown RBP13.54□□□□□ -0.24
SMN1-202ENST00000380707 SNX25Q9H3E2 840 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 PLCB1Q9NQ66 1216 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMN1-202ENST00000380707 CISHQ9NSE2 258 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 FAM207AQ9NSI2 230 aaPredicted RBP13.54□□□□□ -0.24
SMN1-202ENST00000380707 LMCD1Q9NZU5 365 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 HMGXB4Q9UGU5 601 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 AJAP1Q9UKB5 411 aaPredicted RBP13.54□□□□□ -0.24
SMN1-202ENST00000380707 STXBP5LQ9Y2K9 1186 aa13.54□□□□□ -0.24
SMN1-202ENST00000380707 PRRC2BQ5JSZ5 2229 aaKnown RBP13.53□□□□□ -0.24
SMN1-202ENST00000380707 UNC80Q8N2C7 3258 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms