RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 FAM111AQ96PZ2 611 aa17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 BTBD10Q9BSF8 475 aa17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 FAM32AQ9Y421 112 aaKnown RBP17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 WBP4O75554 376 aaKnown RBP17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 UBA6A0AVT1 1052 aaPredicted RBP17.83■□□□□ 0.45
COL4A3BP-203ENST00000380494 GRM1Q13255 1194 aa17.83■□□□□ 0.45
COL4A3BP-203ENST00000380494 SLC10A5Q5PT55 438 aa17.83■□□□□ 0.45
COL4A3BP-203ENST00000380494 TMEM8AQ9HCN3 771 aa17.83■□□□□ 0.45
COL4A3BP-203ENST00000380494 MYO1GB0I1T2 1018 aa17.83■□□□□ 0.45
COL4A3BP-203ENST00000380494 TRIM49D1C9J1S8 452 aa17.83■□□□□ 0.45
COL4A3BP-203ENST00000380494 MIGA2Q7L4E1 593 aa17.83■□□□□ 0.45
COL4A3BP-203ENST00000380494 MTDHQ86UE4 582 aaKnown RBP17.83■□□□□ 0.45
COL4A3BP-203ENST00000380494 CCNJLQ8IV13 435 aa17.83■□□□□ 0.45
COL4A3BP-203ENST00000380494 NLGN1Q8N2Q7 840 aa17.83■□□□□ 0.45
COL4A3BP-203ENST00000380494 NR1H4Q96RI1 486 aaPredicted RBP17.83■□□□□ 0.45
COL4A3BP-203ENST00000380494 PARVBQ9HBI1 364 aa17.83■□□□□ 0.45
COL4A3BP-203ENST00000380494 FAM205CA6NFA0 338 aa17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 MAP2K7O14733 419 aa17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 PYGMP11217 842 aa17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 CRELD2Q6UXH1 353 aaPredicted RBP17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 DPP9Q86TI2 863 aa17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 C17orf80Q9BSJ5 609 aa17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 ADAM33Q9BZ11 813 aa17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 SARS2Q9NP81 518 aaKnown RBP17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 HSD17B4P51659 736 aa17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 CATSPER4Q7RTX7 472 aa17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 TMPRSS6Q8IU80 811 aa17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 CPVLQ9H3G5 476 aa17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 TNFAIP8O95379 198 aa17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 TNFRSF8P28908 595 aa17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 TPI1P60174 286 aa17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 RASA2Q15283 850 aa17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 STK32AQ8WU08 396 aa17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 KLF6Q99612 283 aaPredicted RBP17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 FAM217BQ9NTX9 383 aaPredicted RBP17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 NAGPAQ9UK23 515 aa17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 CAPN6Q9Y6Q1 641 aa17.83■□□□□ 0.44
COL4A3BP-203ENST00000380494 INO80Q9ULG1 1556 aaPredicted RBP17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 LOC100653049A0A140TA62 436 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 AHCYL1O43865 530 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 KRT34O76011 436 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 OVGP1Q12889 678 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 CSTF3Q12996 717 aaKnown RBP17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 NME3Q13232 169 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 PTPAQ15257 358 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 TJAP1Q5JTD0 557 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 NSUN6Q8TEA1 469 aaKnown RBP17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 GOLPH3Q9H4A6 298 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 GDF3Q9NR23 364 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 TLR2O60603 784 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 YWHABP31946 246 aaKnown RBP17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 STIP1P31948 543 aaKnown RBP17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 ANTXR2P58335 489 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 TSPY1Q01534 308 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 ATG9AQ7Z3C6 839 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 TMEM245Q9H330 911 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 PLEKHA5Q9HAU0 1116 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 GABBR1Q9UBS5 961 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 SLCO1B7G3V0H7 640 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 SBK1Q52WX2 424 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 PCNX4Q63HM2 1172 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 ACAD10Q6JQN1 1059 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 EIF1ADQ8N9N8 165 aaKnown RBP17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 FEZF2Q8TBJ5 459 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 ZNF408Q9H9D4 720 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 GLI2P10070 1586 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 QRICH2Q9H0J4 1663 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 ASNSP08243 561 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 MYBP10242 640 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 FDFT1P37268 417 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 SULT1E1P49888 294 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 ELF3P78545 371 aaPredicted RBP17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 SNRNP35Q16560 246 aaKnown RBP17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 CDKAL1Q5VV42 579 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 TRIM65Q6PJ69 517 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 SZRD1Q7Z422 152 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 DAGLBQ8NCG7 672 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 FBXO40Q9UH90 709 aa17.82■□□□□ 0.44
COL4A3BP-203ENST00000380494 GH2P01242 217 aa17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 GSNP06396 782 aa17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 RALAP11233 206 aa17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 KCNJ1P48048 391 aa17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 NFX1Q12986 1120 aaKnown RBP17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 CENPPQ6IPU0 288 aa17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 LPCAT2Q7L5N7 544 aa17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 CENPTQ96BT3 561 aa17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 WNK4Q96J92 1243 aa17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 CDC42EP4Q9H3Q1 356 aaKnown RBP17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 SAR1AQ9NR31 198 aa17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 UBAP1LF5GYI3 381 aa17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 ZNF197O14709 1029 aa17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 DGKIO75912 1065 aa17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 SASH3O75995 380 aa17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 PTK2BQ14289 1009 aa17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 PLEKHM3Q6ZWE6 761 aa17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 BBS7Q8IWZ6 715 aa17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 FUKQ8N0W3 1084 aa17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 SPATA18Q8TC71 538 aa17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 INPP5DQ92835 1189 aa17.81■□□□□ 0.44
COL4A3BP-203ENST00000380494 MIEF2Q96C03 454 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms