RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 HMGB4Q8WW32 186 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 HPS3Q969F9 1004 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 DCBLD2Q96PD2 775 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 TSPAN3O60637 253 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 TACC1O75410 805 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 DNTTP04053 509 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 FGFR2P21802 821 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 FSHRP23945 695 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 PMLP29590 882 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 HNRNPH1P31943 449 aaKnown RBP6.9□□□□□ -1.3
NEDD9-202ENST00000379446 RFC2P35250 354 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 IFFO1Q0D2I5 559 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 PTK7Q13308 1070 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 NNTQ13423 1086 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 WHAMMP3Q1A5X7 153 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 INAVAQ3KP66 663 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 SGO2Q562F6 1265 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 TMEM63BQ5T3F8 832 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 ZNF658Q5TYW1 1059 aaPredicted RBP6.9□□□□□ -1.3
NEDD9-202ENST00000379446 CCDC121Q6ZUS5 278 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 C12orf76Q8N812 135 aaPredicted RBP6.9□□□□□ -1.3
NEDD9-202ENST00000379446 FAM71BQ8TC56 605 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 ZNF512BQ96KM6 892 aaPredicted RBP6.9□□□□□ -1.3
NEDD9-202ENST00000379446 TUBGCP2Q9BSJ2 902 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 LSM14BQ9BX40 385 aaKnown RBP6.9□□□□□ -1.3
NEDD9-202ENST00000379446 CAPS2Q9BXY5 557 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 TXNRD2Q9NNW7 524 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 RWDD2AQ9UIY3 292 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 VPS28Q9UK41 221 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 SLC27A5Q9Y2P5 690 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 CDY1Q9Y6F8 540 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 LMO7Q8WWI1 1683 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 GNA14O95837 355 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 ITGB3P05106 788 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 CXCR5P32302 372 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 C15orf52Q6ZUT6 534 aaKnown RBP6.9□□□□□ -1.3
NEDD9-202ENST00000379446 PHACTR4Q8IZ21 702 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 TMCO5AQ8N6Q1 288 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 MAB21L3Q8N8X9 362 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 NOA1Q8NC60 698 aaKnown RBP6.9□□□□□ -1.3
NEDD9-202ENST00000379446 EHBP1Q8NDI1 1231 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 HERVK_113Q902F9 699 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 HAUS1Q96CS2 278 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 PABPC5Q96DU9 382 aaKnown RBP6.9□□□□□ -1.3
NEDD9-202ENST00000379446 MRRFQ96E11 262 aaKnown RBP6.9□□□□□ -1.3
NEDD9-202ENST00000379446 CNOT6LQ96LI5 555 aaKnown RBP6.9□□□□□ -1.3
NEDD9-202ENST00000379446 PNKPQ96T60 521 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 UBE2TQ9NPD8 197 aaPredicted RBP6.9□□□□□ -1.3
NEDD9-202ENST00000379446 TYW1Q9NV66 732 aaKnown RBP6.9□□□□□ -1.3
NEDD9-202ENST00000379446 STK17AQ9UEE5 414 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 DIS3Q9Y2L1 958 aaKnown RBP6.9□□□□□ -1.3
NEDD9-202ENST00000379446 RIPK3Q9Y572 518 aa6.9□□□□□ -1.3
NEDD9-202ENST00000379446 A0A1W2PRG0 241 aa6.9□□□□□ -1.31
NEDD9-202ENST00000379446 PPP1R3GB7ZBB8 358 aa6.9□□□□□ -1.31
NEDD9-202ENST00000379446 HSF2BPO75031 334 aa6.9□□□□□ -1.31
NEDD9-202ENST00000379446 ATG13O75143 517 aa6.9□□□□□ -1.31
NEDD9-202ENST00000379446 SOX5P35711 763 aa6.9□□□□□ -1.31
NEDD9-202ENST00000379446 LAMTOR4Q0VGL1 99 aa6.9□□□□□ -1.31
NEDD9-202ENST00000379446 POLD3Q15054 466 aaPredicted RBP6.9□□□□□ -1.31
NEDD9-202ENST00000379446 PCNX4Q63HM2 1172 aa6.9□□□□□ -1.31
NEDD9-202ENST00000379446 KAZNQ674X7 775 aa6.9□□□□□ -1.31
NEDD9-202ENST00000379446 NAIF1Q69YI7 327 aaPredicted RBP6.9□□□□□ -1.31
NEDD9-202ENST00000379446 KCNT2Q6UVM3 1135 aa6.9□□□□□ -1.31
NEDD9-202ENST00000379446 C17orf99Q6UX52 265 aa6.9□□□□□ -1.31
NEDD9-202ENST00000379446 PASD1Q8IV76 773 aa6.9□□□□□ -1.31
NEDD9-202ENST00000379446 HERC6Q8IVU3 1022 aa6.9□□□□□ -1.31
NEDD9-202ENST00000379446 GPD1LQ8N335 351 aa6.9□□□□□ -1.31
NEDD9-202ENST00000379446 DCUN1D1Q96GG9 259 aa6.9□□□□□ -1.31
NEDD9-202ENST00000379446 HPDLQ96IR7 371 aa6.9□□□□□ -1.31
NEDD9-202ENST00000379446 DDX23Q9BUQ8 820 aaKnown RBP6.9□□□□□ -1.31
NEDD9-202ENST00000379446 OSBPL2Q9H1P3 480 aa6.9□□□□□ -1.31
NEDD9-202ENST00000379446 DEC1Q9P2X7 70 aa6.9□□□□□ -1.31
NEDD9-202ENST00000379446 ANGPTL3Q9Y5C1 460 aa6.9□□□□□ -1.31
NEDD9-202ENST00000379446 SLIT3O75094 1523 aa6.9□□□□□ -1.31
NEDD9-202ENST00000379446 TBC1D3DA0A087WVF3 549 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 TBC1D3IA0A087WXS9 549 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 TBC1D3EA0A087X179 549 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 TBC1D3KA0A087X1G2 549 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 A0A1B0GUA9 196 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 TBC1D3FA6NER0 549 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 SMIM23A6NLE4 172 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 PDZK1P1A8MUH7 402 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 TBC1D3LB9A6J9 549 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 ZRANB2O95218 330 aaKnown RBP eCLIP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 SERPIND1P05546 499 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 TBC1D3HP0C7X1 549 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 RPL17P18621 184 aaKnown RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 ACAT1P24752 427 aaKnown RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 CORO7P57737 925 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 C2orf54Q08AI8 447 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 PKN1Q16512 942 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 HSDL1Q3SXM5 330 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 TBC1D3GQ6DHY5 549 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 TBC1D3CQ6IPX1 549 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 ANO7Q6IWH7 933 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 GDF6Q6KF10 455 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 RRAGAQ7L523 313 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 TBC1D3Q8IZP1 549 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 EFHBQ8N7U6 833 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 EDEM3Q9BZQ6 932 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms