RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 PCDHGC3Q9UN70 934 aa26.16■■□□□ 1.78
ECHDC3-201ENST00000379215 PFKMP08237 780 aa26.15■■□□□ 1.78
ECHDC3-201ENST00000379215 VDRP11473 427 aa26.15■■□□□ 1.78
ECHDC3-201ENST00000379215 NDST1P52848 882 aa26.15■■□□□ 1.78
ECHDC3-201ENST00000379215 SOWAHAQ2M3V2 549 aa26.15■■□□□ 1.78
ECHDC3-201ENST00000379215 CLLU1OSQ5K130 101 aa26.15■■□□□ 1.78
ECHDC3-201ENST00000379215 DEFB128Q7Z7B8 93 aa26.15■■□□□ 1.78
ECHDC3-201ENST00000379215 SPATA18Q8TC71 538 aa26.15■■□□□ 1.78
ECHDC3-201ENST00000379215 WHAMMQ8TF30 809 aa26.15■■□□□ 1.78
ECHDC3-201ENST00000379215 ALS2CR12Q96Q35 445 aa26.15■■□□□ 1.78
ECHDC3-201ENST00000379215 MRPL9Q9BYD2 267 aaKnown RBP26.15■■□□□ 1.78
ECHDC3-201ENST00000379215 ZNF518BQ9C0D4 1074 aa26.15■■□□□ 1.78
ECHDC3-201ENST00000379215 CASTOR2A6NHX0 329 aa26.14■■□□□ 1.78
ECHDC3-201ENST00000379215 SPTLC1O15269 473 aa26.14■■□□□ 1.78
ECHDC3-201ENST00000379215 EFCAB14O75071 495 aa26.14■■□□□ 1.78
ECHDC3-201ENST00000379215 CYP1A1P04798 512 aaPredicted RBP26.14■■□□□ 1.78
ECHDC3-201ENST00000379215 CD19P15391 556 aa26.14■■□□□ 1.78
ECHDC3-201ENST00000379215 GALCP54803 685 aa26.14■■□□□ 1.78
ECHDC3-201ENST00000379215 ACAD10Q6JQN1 1059 aa26.14■■□□□ 1.78
ECHDC3-201ENST00000379215 PALB2Q86YC2 1186 aa26.14■■□□□ 1.78
ECHDC3-201ENST00000379215 TMEM86AQ8N2M4 240 aa26.14■■□□□ 1.78
ECHDC3-201ENST00000379215 SLC4A11Q8NBS3 891 aa26.14■■□□□ 1.78
ECHDC3-201ENST00000379215 NOX5Q96PH1 765 aa26.14■■□□□ 1.78
ECHDC3-201ENST00000379215 SNX25Q9H3E2 840 aa26.14■■□□□ 1.78
ECHDC3-201ENST00000379215 PRDM5Q9NQX1 630 aaPredicted RBP26.14■■□□□ 1.78
ECHDC3-201ENST00000379215 TMCO5BA8MYB1 307 aa26.14■■□□□ 1.77
ECHDC3-201ENST00000379215 FTLP02792 175 aaPredicted RBP26.14■■□□□ 1.77
ECHDC3-201ENST00000379215 UNGP13051 313 aaPredicted RBP26.14■■□□□ 1.77
ECHDC3-201ENST00000379215 RAG1P15918 1043 aa26.14■■□□□ 1.77
ECHDC3-201ENST00000379215 NSFP46459 744 aaKnown RBP26.14■■□□□ 1.77
ECHDC3-201ENST00000379215 AARSP49588 968 aaKnown RBP eCLIP26.14■■□□□ 1.77
ECHDC3-201ENST00000379215 ADGRF2Q8IZF7 708 aa26.14■■□□□ 1.77
ECHDC3-201ENST00000379215 TMEM199Q8N511 208 aa26.14■■□□□ 1.77
ECHDC3-201ENST00000379215 TRIM58Q8NG06 486 aa26.14■■□□□ 1.77
ECHDC3-201ENST00000379215 FAM193BQ96PV7 902 aaPredicted RBP26.14■■□□□ 1.77
ECHDC3-201ENST00000379215 MRPL45Q9BRJ2 306 aaKnown RBP26.14■■□□□ 1.77
ECHDC3-201ENST00000379215 PACSIN1Q9BY11 444 aa26.14■■□□□ 1.77
ECHDC3-201ENST00000379215 ELOVL4Q9GZR5 314 aa26.14■■□□□ 1.77
ECHDC3-201ENST00000379215 TRIM10Q9UDY6 481 aa26.14■■□□□ 1.77
ECHDC3-201ENST00000379215 MACROD2A1Z1Q3 448 aa26.13■■□□□ 1.77
ECHDC3-201ENST00000379215 CYB561D2O14569 222 aa26.13■■□□□ 1.77
ECHDC3-201ENST00000379215 WARSP23381 471 aaKnown RBP26.13■■□□□ 1.77
ECHDC3-201ENST00000379215 CENPCQ03188 943 aa26.13■■□□□ 1.77
ECHDC3-201ENST00000379215 RNASELQ05823 741 aaKnown RBP26.13■■□□□ 1.77
ECHDC3-201ENST00000379215 DSC1Q08554 894 aa26.13■■□□□ 1.77
ECHDC3-201ENST00000379215 SGO2Q562F6 1265 aa26.13■■□□□ 1.77
ECHDC3-201ENST00000379215 ZNF569Q5MCW4 686 aa26.13■■□□□ 1.77
ECHDC3-201ENST00000379215 DCLRE1AQ6PJP8 1040 aa26.13■■□□□ 1.77
ECHDC3-201ENST00000379215 UBE2Q1Q7Z7E8 422 aa26.13■■□□□ 1.77
ECHDC3-201ENST00000379215 OR6B3Q8NGW1 331 aa26.13■■□□□ 1.77
ECHDC3-201ENST00000379215 DNAI1Q9UI46 699 aa26.13■■□□□ 1.77
ECHDC3-201ENST00000379215 TFR2Q9UP52 801 aa26.13■■□□□ 1.77
ECHDC3-201ENST00000379215 NCANO14594 1321 aa26.12■■□□□ 1.77
ECHDC3-201ENST00000379215 ABHD14A-ACY1A0A1B0GW23 586 aa26.12■■□□□ 1.77
ECHDC3-201ENST00000379215 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.12■■□□□ 1.77
ECHDC3-201ENST00000379215 MYBL1P10243 752 aa26.12■■□□□ 1.77
ECHDC3-201ENST00000379215 FGFR1P11362 822 aa26.12■■□□□ 1.77
ECHDC3-201ENST00000379215 BRD2P25440 801 aaKnown RBP26.12■■□□□ 1.77
ECHDC3-201ENST00000379215 MFSD5Q6N075 450 aa26.12■■□□□ 1.77
ECHDC3-201ENST00000379215 DSTYKQ6XUX3 929 aa26.12■■□□□ 1.77
ECHDC3-201ENST00000379215 SYT10Q6XYQ8 523 aa26.12■■□□□ 1.77
ECHDC3-201ENST00000379215 TMEM35BQ8NCS4 154 aa26.12■■□□□ 1.77
ECHDC3-201ENST00000379215 RFFLQ8WZ73 363 aa26.12■■□□□ 1.77
ECHDC3-201ENST00000379215 HEXIM2Q96MH2 286 aaKnown RBP26.12■■□□□ 1.77
ECHDC3-201ENST00000379215 LHX5Q9H2C1 402 aa26.12■■□□□ 1.77
ECHDC3-201ENST00000379215 TBC1D13Q9NVG8 400 aa26.12■■□□□ 1.77
ECHDC3-201ENST00000379215 TAS2R14Q9NYV8 317 aa26.12■■□□□ 1.77
ECHDC3-201ENST00000379215 DSEQ9UL01 958 aa26.12■■□□□ 1.77
ECHDC3-201ENST00000379215 L1RE1Q9UN81 338 aa26.12■■□□□ 1.77
ECHDC3-201ENST00000379215 PAXBP1Q9Y5B6 917 aa26.12■■□□□ 1.77
ECHDC3-201ENST00000379215 SCN1AP35498 2009 aa26.12■■□□□ 1.77
ECHDC3-201ENST00000379215 B3GAT3O94766 335 aa26.11■■□□□ 1.77
ECHDC3-201ENST00000379215 GNL1P36915 607 aaPredicted RBP26.11■■□□□ 1.77
ECHDC3-201ENST00000379215 GPC5P78333 572 aa26.11■■□□□ 1.77
ECHDC3-201ENST00000379215 RHOT2Q8IXI1 618 aa26.11■■□□□ 1.77
ECHDC3-201ENST00000379215 VCPIP1Q96JH7 1222 aa26.11■■□□□ 1.77
ECHDC3-201ENST00000379215 TNIP3Q96KP6 325 aa26.11■■□□□ 1.77
ECHDC3-201ENST00000379215 SENP8Q96LD8 212 aa26.11■■□□□ 1.77
ECHDC3-201ENST00000379215 TWNKQ96RR1 684 aa26.11■■□□□ 1.77
ECHDC3-201ENST00000379215 HMGXB4Q9UGU5 601 aa26.11■■□□□ 1.77
ECHDC3-201ENST00000379215 A8MXQ7 604 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 TMEM189-UBE2V1I3L0A0 370 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 ABL1P00519 1130 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 ODC1P11926 461 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 CASQ1P31415 396 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 CDH5P33151 784 aaPredicted RBP26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 LHX1P48742 406 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 NAP1L1P55209 391 aaKnown RBP26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 NOMO3P69849 1222 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 CNGA2Q16280 664 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 PDCL2Q8N4E4 241 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 KBTBD7Q8WVZ9 684 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 ZNF592Q92610 1267 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 DUSP10Q9Y6W6 482 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 TRIM43BA6NCK2 446 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 TCEAL1Q15170 157 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 TCTN1Q2MV58 587 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 NAA35Q5VZE5 725 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 CRIPAKQ8N1N5 446 aa26.1■■□□□ 1.77
ECHDC3-201ENST00000379215 TFAP2BQ92481 460 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms