RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 SOWAHAQ2M3V2 549 aa12.78□□□□□ -0.36
PCNA-201ENST00000379143 TCP11X2Q5H9J9 407 aa12.78□□□□□ -0.36
PCNA-201ENST00000379143 WDR44Q5JSH3 913 aa12.78□□□□□ -0.36
PCNA-201ENST00000379143 CDKAL1Q5VV42 579 aa12.78□□□□□ -0.36
PCNA-201ENST00000379143 SCARA3Q6AZY7 606 aa12.78□□□□□ -0.36
PCNA-201ENST00000379143 LIMS2Q7Z4I7 341 aa12.78□□□□□ -0.36
PCNA-201ENST00000379143 ADGRF2Q8IZF7 708 aa12.78□□□□□ -0.36
PCNA-201ENST00000379143 PDCL2Q8N4E4 241 aa12.78□□□□□ -0.36
PCNA-201ENST00000379143 AOPEPQ8N6M6 819 aa12.78□□□□□ -0.36
PCNA-201ENST00000379143 ATXN2LQ8WWM7 1075 aaKnown RBP12.78□□□□□ -0.36
PCNA-201ENST00000379143 CLSTN3Q9BQT9 956 aa12.78□□□□□ -0.36
PCNA-201ENST00000379143 TUBGCP2Q9BSJ2 902 aa12.78□□□□□ -0.36
PCNA-201ENST00000379143 IGFLR1Q9H665 355 aa12.78□□□□□ -0.36
PCNA-201ENST00000379143 FANCLQ9NW38 375 aa12.78□□□□□ -0.36
PCNA-201ENST00000379143 NXF1Q9UBU9 619 aaKnown RBP12.78□□□□□ -0.36
PCNA-201ENST00000379143 FBXL5Q9UKA1 691 aa12.78□□□□□ -0.36
PCNA-201ENST00000379143 L1RE1Q9UN81 338 aa12.78□□□□□ -0.36
PCNA-201ENST00000379143 TIMM13Q9Y5L4 95 aaPredicted RBP12.78□□□□□ -0.36
PCNA-201ENST00000379143 CDY1Q9Y6F8 540 aa12.78□□□□□ -0.36
PCNA-201ENST00000379143 TCF20Q9UGU0 1960 aaKnown RBP12.78□□□□□ -0.36
PCNA-201ENST00000379143 TSC2P49815 1807 aa12.77□□□□□ -0.36
PCNA-201ENST00000379143 TACC1O75410 805 aa12.77□□□□□ -0.37
PCNA-201ENST00000379143 GLUD1P00367 558 aa12.77□□□□□ -0.37
PCNA-201ENST00000379143 PCSK1P29120 753 aa12.77□□□□□ -0.37
PCNA-201ENST00000379143 OR1D2P34982 312 aa12.77□□□□□ -0.37
PCNA-201ENST00000379143 CLCN4P51793 760 aa12.77□□□□□ -0.37
PCNA-201ENST00000379143 TPM4P67936 248 aa12.77□□□□□ -0.37
PCNA-201ENST00000379143 NOP14P78316 857 aaKnown RBP12.77□□□□□ -0.37
PCNA-201ENST00000379143 RAB33AQ14088 237 aa12.77□□□□□ -0.37
PCNA-201ENST00000379143 COL19A1Q14993 1142 aa12.77□□□□□ -0.37
PCNA-201ENST00000379143 CCDC85BQ15834 202 aaPredicted RBP12.77□□□□□ -0.37
PCNA-201ENST00000379143 WSCD1Q658N2 575 aa12.77□□□□□ -0.37
PCNA-201ENST00000379143 TMEM184AQ6ZMB5 413 aa12.77□□□□□ -0.37
PCNA-201ENST00000379143 HDAC7Q8WUI4 952 aa12.77□□□□□ -0.37
PCNA-201ENST00000379143 PPM1EQ8WY54 764 aa12.77□□□□□ -0.37
PCNA-201ENST00000379143 CASP10Q92851 521 aa12.77□□□□□ -0.37
PCNA-201ENST00000379143 PABPC5Q96DU9 382 aaKnown RBP12.77□□□□□ -0.37
PCNA-201ENST00000379143 FAM124BQ9H5Z6 455 aaPredicted RBP12.77□□□□□ -0.37
PCNA-201ENST00000379143 THEGQ9P2T0 379 aa12.77□□□□□ -0.37
PCNA-201ENST00000379143 MAFFQ9ULX9 164 aa12.77□□□□□ -0.37
PCNA-201ENST00000379143 GTPBP10A4D1E9 387 aaKnown RBP12.76□□□□□ -0.37
PCNA-201ENST00000379143 GABRDO14764 452 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 RPL17P18621 184 aaKnown RBP12.76□□□□□ -0.37
PCNA-201ENST00000379143 TRIM21P19474 475 aaKnown RBP12.76□□□□□ -0.37
PCNA-201ENST00000379143 CDK11BP21127 795 aaKnown RBP12.76□□□□□ -0.37
PCNA-201ENST00000379143 WARSP23381 471 aaKnown RBP12.76□□□□□ -0.37
PCNA-201ENST00000379143 PLA2G5P39877 138 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 SMARCB1Q12824 385 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 ADAM15Q13444 863 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 KCNC3Q14003 757 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 NCAPHQ15003 741 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 SKIV2LQ15477 1246 aaKnown RBP12.76□□□□□ -0.37
PCNA-201ENST00000379143 CTC1Q2NKJ3 1217 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 VWA3BQ502W6 1294 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 HSP90AA4PQ58FG1 418 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 PRRC2BQ5JSZ5 2229 aaKnown RBP12.76□□□□□ -0.37
PCNA-201ENST00000379143 TPGS2Q68CL5 300 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 LRSAM1Q6UWE0 723 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 RTL10Q7L3V2 364 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 PALB2Q86YC2 1186 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 TTC39CQ8N584 583 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 ZNF461Q8TAF7 563 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 SLC22A17Q8WUG5 538 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 ASB2Q96Q27 587 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 ACBD6Q9BR61 282 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 DNAI2Q9GZS0 605 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 NIF3L1Q9GZT8 377 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 SNX25Q9H3E2 840 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 NDST4Q9H3R1 872 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 PLEKHA4Q9H4M7 779 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 CYP3A43Q9HB55 503 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 DZANK1Q9NVP4 752 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 DDX43Q9NXZ2 648 aaKnown RBP12.76□□□□□ -0.37
PCNA-201ENST00000379143 COG5Q9UP83 839 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 HCFC2Q9Y5Z7 792 aa12.76□□□□□ -0.37
PCNA-201ENST00000379143 CPB1P15086 417 aa12.75□□□□□ -0.37
PCNA-201ENST00000379143 ZNF18P17022 549 aa12.75□□□□□ -0.37
PCNA-201ENST00000379143 TBXAS1P24557 533 aaPredicted RBP12.75□□□□□ -0.37
PCNA-201ENST00000379143 GTF2F1P35269 517 aaKnown RBP eCLIP12.75□□□□□ -0.37
PCNA-201ENST00000379143 TSPY1Q01534 308 aa12.75□□□□□ -0.37
PCNA-201ENST00000379143 ROR1Q01973 937 aa12.75□□□□□ -0.37
PCNA-201ENST00000379143 GPR17Q13304 367 aa12.75□□□□□ -0.37
PCNA-201ENST00000379143 IQCB1Q15051 598 aa12.75□□□□□ -0.37
PCNA-201ENST00000379143 LILRA6Q6PI73 481 aa12.75□□□□□ -0.37
PCNA-201ENST00000379143 RSPO2Q6UXX9 243 aaPredicted RBP12.75□□□□□ -0.37
PCNA-201ENST00000379143 GBP6Q6ZN66 633 aa12.75□□□□□ -0.37
PCNA-201ENST00000379143 GLYCTKQ8IVS8 523 aa12.75□□□□□ -0.37
PCNA-201ENST00000379143 DHX40Q8IX18 779 aaKnown RBP12.75□□□□□ -0.37
PCNA-201ENST00000379143 DCP1BQ8IZD4 617 aaKnown RBP12.75□□□□□ -0.37
PCNA-201ENST00000379143 FAM200AQ8TCP9 573 aa12.75□□□□□ -0.37
PCNA-201ENST00000379143 ADAMTS19Q8TE59 1207 aa12.75□□□□□ -0.37
PCNA-201ENST00000379143 KBTBD7Q8WVZ9 684 aa12.75□□□□□ -0.37
PCNA-201ENST00000379143 SEMA4DQ92854 862 aa12.75□□□□□ -0.37
PCNA-201ENST00000379143 HLA-CQ95604 372 aa12.75□□□□□ -0.37
PCNA-201ENST00000379143 PI4K2AQ9BTU6 479 aa12.75□□□□□ -0.37
PCNA-201ENST00000379143 BCO2Q9BYV7 579 aa12.75□□□□□ -0.37
PCNA-201ENST00000379143 TSPY26PQ9H489 355 aa12.75□□□□□ -0.37
PCNA-201ENST00000379143 CLDND1Q9NY35 253 aa12.75□□□□□ -0.37
PCNA-201ENST00000379143 LIMA1Q9UHB6 759 aaKnown RBP12.75□□□□□ -0.37
PCNA-201ENST00000379143 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms