RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 ZNF394Q53GI3 561 aa11.86□□□□□ -0.51
ITM2B-202ENST00000378565 RAB6BQ9NRW1 208 aa11.86□□□□□ -0.51
ITM2B-202ENST00000378565 A2MP01023 1474 aa11.86□□□□□ -0.51
ITM2B-202ENST00000378565 RPAP1Q9BWH6 1393 aaPredicted RBP11.86□□□□□ -0.51
ITM2B-202ENST00000378565 LSM1O15116 133 aaKnown RBP11.86□□□□□ -0.51
ITM2B-202ENST00000378565 GCP02774 474 aa11.86□□□□□ -0.51
ITM2B-202ENST00000378565 PTPN4P29074 926 aa11.86□□□□□ -0.51
ITM2B-202ENST00000378565 NFIL3Q16649 462 aa11.86□□□□□ -0.51
ITM2B-202ENST00000378565 MTERF2Q49AM1 385 aa11.86□□□□□ -0.51
ITM2B-202ENST00000378565 KCNT1Q5JUK3 1230 aa11.86□□□□□ -0.51
ITM2B-202ENST00000378565 ZFP1Q6P2D0 407 aa11.86□□□□□ -0.51
ITM2B-202ENST00000378565 ASIC4Q96FT7 647 aa11.86□□□□□ -0.51
ITM2B-202ENST00000378565 FOPNLQ96NB1 174 aa11.86□□□□□ -0.51
ITM2B-202ENST00000378565 SMARCAL1Q9NZC9 954 aa11.86□□□□□ -0.51
ITM2B-202ENST00000378565 TAGLN3Q9UI15 199 aa11.86□□□□□ -0.51
ITM2B-202ENST00000378565 FHOD1Q9Y613 1164 aa11.86□□□□□ -0.51
ITM2B-202ENST00000378565 LOC100653049A0A140TA62 436 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 KRT34O76011 436 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 PDE8BO95263 885 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 KIZQ2M2Z5 673 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 USP38Q8NB14 1042 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 ANKRD49Q8WVL7 239 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 DCUN1D5Q9BTE7 237 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 TTC37Q6PGP7 1564 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 C3orf70A6NLC5 250 aaPredicted RBP11.85□□□□□ -0.51
ITM2B-202ENST00000378565 TPST1O60507 370 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 ARL10Q8N8L6 244 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 NOA1Q8NC60 698 aaKnown RBP11.85□□□□□ -0.51
ITM2B-202ENST00000378565 DMAP1Q9NPF5 467 aaPredicted RBP11.85□□□□□ -0.51
ITM2B-202ENST00000378565 TRIM43BA6NCK2 446 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 POTEMA6NI47 508 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 MLNP12872 115 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 TNFAIP2Q03169 654 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 TCIRG1Q13488 830 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 SYDE2Q5VT97 1194 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 EFHBQ8N7U6 833 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 RNFT2Q96EX2 444 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 ZSWIM5Q9P217 1185 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 BTBD3Q9Y2F9 522 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 PIGHQ14442 188 aaPredicted RBP11.85□□□□□ -0.51
ITM2B-202ENST00000378565 EFHC1Q5JVL4 640 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 ANKRD40Q6AI12 368 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 KIAA0408Q6ZU52 694 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 BTN2A1Q7KYR7 527 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 SPATA18Q8TC71 538 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 TINF2Q9BSI4 451 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 PABPC3Q9H361 631 aaKnown RBP11.85□□□□□ -0.51
ITM2B-202ENST00000378565 BAIAP3O94812 1187 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 AKAP5P24588 427 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 PHKA1P46020 1223 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 KCNB1Q14721 858 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 GJA8P48165 433 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 LGALS3BPQ08380 585 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 PWP1Q13610 501 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 C9orf72Q96LT7 481 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 AIFM3Q96NN9 605 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 PDCD10Q9BUL8 212 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 BDH2Q9BUT1 245 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 STK33Q9BYT3 514 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 MYH7BA7E2Y1 1941 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 PHGDHO43175 533 aaKnown RBP11.85□□□□□ -0.51
ITM2B-202ENST00000378565 CASP1P29466 404 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 ZNF235Q14590 738 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 NYAP1Q6ZVC0 841 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 LRRC34Q8IZ02 419 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 SHCBP1Q8NEM2 672 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 GANCQ8TET4 914 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 INTS2Q9H0H0 1204 aaKnown RBP11.85□□□□□ -0.51
ITM2B-202ENST00000378565 DDX20Q9UHI6 824 aaKnown RBP11.85□□□□□ -0.51
ITM2B-202ENST00000378565 TRIM49D1C9J1S8 452 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 NME3Q13232 169 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 USP10Q14694 798 aaKnown RBP11.85□□□□□ -0.51
ITM2B-202ENST00000378565 RASA2Q15283 850 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 Q3C1V9 767 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 LRRC24Q50LG9 513 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 WASHC2DQ5SRD0 308 aa11.85□□□□□ -0.51
ITM2B-202ENST00000378565 IRX2Q9BZI1 471 aaPredicted RBP11.85□□□□□ -0.51
ITM2B-202ENST00000378565 TCOF1Q13428 1488 aaKnown RBP11.85□□□□□ -0.51
ITM2B-202ENST00000378565 SF3B1O75533 1304 aaKnown RBP eCLIP11.84□□□□□ -0.51
ITM2B-202ENST00000378565 PSMD3O43242 534 aa11.84□□□□□ -0.51
ITM2B-202ENST00000378565 ALOX12P18054 663 aa11.84□□□□□ -0.51
ITM2B-202ENST00000378565 EPS8Q12929 822 aa11.84□□□□□ -0.51
ITM2B-202ENST00000378565 KCTD2Q14681 263 aa11.84□□□□□ -0.51
ITM2B-202ENST00000378565 NAB2Q15742 525 aa11.84□□□□□ -0.51
ITM2B-202ENST00000378565 CYP51A1Q16850 503 aa11.84□□□□□ -0.51
ITM2B-202ENST00000378565 SLC27A3Q5K4L6 730 aa11.84□□□□□ -0.51
ITM2B-202ENST00000378565 LGR6Q9HBX8 967 aa11.84□□□□□ -0.51
ITM2B-202ENST00000378565 CCNL1Q9UK58 526 aaPredicted RBP11.84□□□□□ -0.51
ITM2B-202ENST00000378565 SLC16A3O15427 465 aaKnown RBP11.84□□□□□ -0.51
ITM2B-202ENST00000378565 ROR2Q01974 943 aaKnown RBP11.84□□□□□ -0.51
ITM2B-202ENST00000378565 NECTIN1Q15223 517 aa11.84□□□□□ -0.51
ITM2B-202ENST00000378565 SVOPQ8N4V2 548 aa11.84□□□□□ -0.51
ITM2B-202ENST00000378565 FUT8Q9BYC5 575 aa11.84□□□□□ -0.51
ITM2B-202ENST00000378565 ADAM33Q9BZ11 813 aa11.84□□□□□ -0.51
ITM2B-202ENST00000378565 FRMD8Q9BZ67 464 aaPredicted RBP11.84□□□□□ -0.51
ITM2B-202ENST00000378565 RERGLQ9H628 205 aa11.84□□□□□ -0.51
ITM2B-202ENST00000378565 PEX1O43933 1283 aa11.84□□□□□ -0.51
ITM2B-202ENST00000378565 PRR29P0C7W0 189 aa11.84□□□□□ -0.51
ITM2B-202ENST00000378565 RAD23AP54725 363 aa11.84□□□□□ -0.51
ITM2B-202ENST00000378565 AP3B2Q13367 1082 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms