RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 GDAP2Q9NXN4 497 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 DDX43Q9NXZ2 648 aaKnown RBP12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 TAB2Q9NYJ8 693 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 MTRRQ9UBK8 725 aa12.57□□□□□ -0.4
DEPDC4-202ENST00000378244 VWA8A3KMH1 1905 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 TGM5O43548 720 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 OAZ2O95190 189 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 KCNA5P22460 613 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 LMO2P25791 158 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 ATICP31939 592 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 NDUFV1P49821 464 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 ROR1Q01973 937 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 DUSP6Q16828 381 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 CCDC150Q8NCX0 1101 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 OR6B3Q8NGW1 331 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 OR10T2Q8NGX3 314 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 TATDN2Q93075 761 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 RXFP1Q9HBX9 757 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 H7C4K7 107 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 GLP2RO95838 553 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 CD58P19256 250 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 CLCN4P51793 760 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 APBA1Q02410 837 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 ORC1Q13415 861 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 MRPL58Q14197 206 aaKnown RBP12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 WDR44Q5JSH3 913 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 ARID3AQ99856 593 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 CBX8Q9HC52 389 aa12.56□□□□□ -0.4
DEPDC4-202ENST00000378244 WDR27A2RRH5 827 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 ATP2C2O75185 946 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 GLUD1P00367 558 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 TYMPP19971 482 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 PSMC1P62191 440 aaKnown RBP12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 TFF2Q03403 129 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 ENPEPQ07075 957 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 CETN1Q12798 172 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 CDKAL1Q5VV42 579 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 PDXDC1Q6P996 788 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 OSTM1Q86WC4 334 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 THEM5Q8N1Q8 247 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 TOP6BLQ8N6T0 577 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 C12orf76Q8N812 135 aaPredicted RBP12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 RNF214Q8ND24 703 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 FEZF2Q8TBJ5 459 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 KBTBD7Q8WVZ9 684 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 LPIN3Q9BQK8 851 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 RTP3Q9BQQ7 232 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 SDCBP2Q9H190 292 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 HSD3B7Q9H2F3 369 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 NDST4Q9H3R1 872 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 FNIP2Q9P278 1114 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 DSEQ9UL01 958 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 ARHGEF37A1IGU5 675 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 TBX10O75333 385 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 CYP11A1P05108 521 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 EEF1GP26641 437 aaKnown RBP12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 ASPAP45381 313 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 MCCD1P59942 119 aaPredicted RBP12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 KRT31Q15323 416 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 MAN2A1Q16706 1144 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 SLC39A12Q504Y0 691 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 ZNF394Q53GI3 561 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 SLC8B1Q6J4K2 584 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 EFHBQ8N7U6 833 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 SNX25Q9H3E2 840 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 MAN1C1Q9NR34 630 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 GCNT4Q9P109 453 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 CDH22Q9UJ99 828 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 GTF3C4Q9UKN8 822 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 BACE2Q9Y5Z0 518 aa12.55□□□□□ -0.4
DEPDC4-202ENST00000378244 A8MXQ7 604 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 TBC1D4O60343 1298 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 RFPL2O75678 378 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 PAX3P23760 479 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 GNL1P36915 607 aaPredicted RBP12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 LTBRP36941 435 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 ADCY1Q08828 1119 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 ADAM15Q13444 863 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 IQCB1Q15051 598 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 VWA3BQ502W6 1294 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 MIIPQ5JXC2 388 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 RNF19BQ6ZMZ0 732 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 RRAGAQ7L523 313 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 DPH6Q7L8W6 267 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 LRRTM3Q86VH5 581 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 TMEM86AQ8N2M4 240 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 PPM1KQ8N3J5 372 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 ATAD1Q8NBU5 361 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 VRTNQ9H8Y1 702 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 SLC27A5Q9Y2P5 690 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 COQ4Q9Y3A0 265 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 NME7Q9Y5B8 376 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 ATG2AQ2TAZ0 1938 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 SMTNL1A8MU46 457 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 N4BP1O75113 896 aaKnown RBP12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 STAU1O95793 577 aaKnown RBP12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 P4HA1P13674 534 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 SLC9A1P19634 815 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 CREMQ03060 361 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms