RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 SHANK2Q9UPX8 1470 aa14.74□□□□□ -0.05
TRIM13-202ENST00000378182 CFAP99D6REC4 459 aa14.74□□□□□ -0.05
TRIM13-202ENST00000378182 RTN2O75298 545 aa14.74□□□□□ -0.05
TRIM13-202ENST00000378182 KRT20P35900 424 aa14.74□□□□□ -0.05
TRIM13-202ENST00000378182 CEP170Q5SW79 1584 aa14.74□□□□□ -0.05
TRIM13-202ENST00000378182 ZC2HC1CQ53FD0 456 aaPredicted RBP14.74□□□□□ -0.05
TRIM13-202ENST00000378182 STRIP1Q5VSL9 837 aa14.74□□□□□ -0.05
TRIM13-202ENST00000378182 C16orf62Q7Z3J2 963 aa14.74□□□□□ -0.05
TRIM13-202ENST00000378182 FAM84BQ96KN1 310 aaPredicted RBP14.74□□□□□ -0.05
TRIM13-202ENST00000378182 PRMT1Q99873 361 aaKnown RBP14.74□□□□□ -0.05
TRIM13-202ENST00000378182 TUFT1Q9NNX1 390 aa14.74□□□□□ -0.05
TRIM13-202ENST00000378182 ATMINO43313 823 aaPredicted RBP14.73□□□□□ -0.05
TRIM13-202ENST00000378182 TBC1D4O60343 1298 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 GALNTL6Q49A17 601 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 MRPS31Q92665 395 aaKnown RBP14.73□□□□□ -0.05
TRIM13-202ENST00000378182 TSPAN17Q96FV3 270 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 OSBPL5Q9H0X9 879 aaPredicted RBP14.73□□□□□ -0.05
TRIM13-202ENST00000378182 DPP3Q9NY33 737 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 RNF14Q9UBS8 474 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 SNX8Q9Y5X2 465 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 SPACA6W5XKT8 324 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 ANKRD65E5RJM6 399 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 PCSK1P29120 753 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 MKL2Q9ULH7 1088 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 TBKBP1A7MCY6 615 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 RGL2O15211 777 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 HAUS5O94927 633 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 MAP3K6O95382 1288 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 AP3M2P53677 418 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 NCKAP1LP55160 1127 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 CAV1Q03135 178 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 EIF2B5Q13144 721 aaKnown RBP14.73□□□□□ -0.05
TRIM13-202ENST00000378182 ARID5BQ14865 1188 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 TRIM69Q86WT6 500 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 NPHS2Q9NP85 383 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 F5H5T6 163 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 TSPAN3O60637 253 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 FYNP06241 537 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 MAP3K7CLP57077 242 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 CASP8Q14790 479 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 ADCK1Q86TW2 530 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 ANKRD13AQ8IZ07 590 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 ATP6V0D2Q8N8Y2 350 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 FLT1P17948 1338 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 GPR182O15218 404 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 NBNO60934 754 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 EPHB3P54753 998 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 HDAC4P56524 1084 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 TEDDM1Q5T9Z0 273 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 PLD3Q8IV08 490 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 FBXO16Q8IX29 292 aaPredicted RBP14.73□□□□□ -0.05
TRIM13-202ENST00000378182 LINC00116Q8NCU8 138 aa14.73□□□□□ -0.05
TRIM13-202ENST00000378182 DDX28Q9NUL7 540 aaKnown RBP14.73□□□□□ -0.05
TRIM13-202ENST00000378182 CAB39Q9Y376 341 aaPredicted RBP14.73□□□□□ -0.05
TRIM13-202ENST00000378182 RRP15Q9Y3B9 282 aaKnown RBP14.73□□□□□ -0.05
TRIM13-202ENST00000378182 A8MX80 341 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 STARD3Q14849 445 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 TRIM10Q9UDY6 481 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 POU4F1Q01851 419 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 XKR3Q5GH77 459 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 OTOAQ7RTW8 1153 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 RPRD1AQ96P16 312 aaPredicted RBP14.72□□□□□ -0.05
TRIM13-202ENST00000378182 OSBPL9Q96SU4 736 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 F8W810 466 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 H7C1W4 665 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 GOLPH3LQ9H4A5 285 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 PLA2G4CQ9UP65 541 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 STRNO43815 780 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 CLASP2O75122 1294 aaKnown RBP14.72□□□□□ -0.05
TRIM13-202ENST00000378182 NUDT14O95848 222 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 ITGB6P18564 788 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 GTF2H1P32780 548 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 NME5P56597 212 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 ABCE1P61221 599 aaKnown RBP14.72□□□□□ -0.05
TRIM13-202ENST00000378182 EPHA7Q15375 998 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 SNRNP35Q16560 246 aaKnown RBP14.72□□□□□ -0.05
TRIM13-202ENST00000378182 CLEC16AQ2KHT3 1053 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 SGSM1Q2NKQ1 1148 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 YY1AP1Q9H869 796 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 KDM6BO15054 1643 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 MIF4GDA9UHW6 222 aaKnown RBP14.72□□□□□ -0.05
TRIM13-202ENST00000378182 ZBTB39O15060 712 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 RAP1GAPP47736 663 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 BCL2L14Q9BZR8 327 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 CHORDC1Q9UHD1 332 aaPredicted RBP14.72□□□□□ -0.05
TRIM13-202ENST00000378182 LGALS16A8MUM7 142 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 PSMD12O00232 456 aaPredicted RBP14.72□□□□□ -0.05
TRIM13-202ENST00000378182 MAGEB2O15479 319 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 RNF112Q9ULX5 631 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 AXIN2Q9Y2T1 843 aa14.72□□□□□ -0.05
TRIM13-202ENST00000378182 NDUFB10O96000 172 aa14.71□□□□□ -0.05
TRIM13-202ENST00000378182 CAPN1P07384 714 aa14.71□□□□□ -0.05
TRIM13-202ENST00000378182 PLA2G4AP47712 749 aa14.71□□□□□ -0.05
TRIM13-202ENST00000378182 ALDH9A1P49189 494 aa14.71□□□□□ -0.05
TRIM13-202ENST00000378182 USP11P51784 963 aa14.71□□□□□ -0.05
TRIM13-202ENST00000378182 TRIP4Q15650 581 aaPredicted RBP14.71□□□□□ -0.05
TRIM13-202ENST00000378182 DOK6Q6PKX4 331 aa14.71□□□□□ -0.05
TRIM13-202ENST00000378182 ENOSF1Q7L5Y1 443 aa14.71□□□□□ -0.05
TRIM13-202ENST00000378182 RBBP8NLQ8NC74 664 aaPredicted RBP14.71□□□□□ -0.05
TRIM13-202ENST00000378182 ARRDC4Q8NCT1 418 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms