RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 SPATA31A5Q5VU36 1347 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 SPATA31A6Q5VVP1 1343 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 SPATA31A7Q8IWB4 1347 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 IGLV3-22A0A075B6J6 115 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 FCHO1O14526 889 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 HNRNPCL1O60812 293 aaKnown RBP16.72■□□□□ 0.27
CKAP4-201ENST00000378026 CCNFP41002 786 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 PRELPP51888 382 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 SLC9A9Q8IVB4 645 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 FAM111AQ96PZ2 611 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 TMEM121Q9BTD3 319 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 UNC45AQ9H3U1 944 aa16.72■□□□□ 0.27
CKAP4-201ENST00000378026 SLC16A4O15374 487 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 GDF11O95390 407 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 FOSP01100 380 aaPredicted RBP16.71■□□□□ 0.27
CKAP4-201ENST00000378026 GPX6P59796 221 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 CDK16Q00536 496 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 HELQQ8TDG4 1101 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 POMGNT1Q8WZA1 660 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 NT5C1BQ96P26 610 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 SPATA16Q9BXB7 569 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 KCNK13Q9HB14 408 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 GGA1Q9UJY5 639 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 CDK5RAP2Q96SN8 1893 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.71■□□□□ 0.27
CKAP4-201ENST00000378026 SGK1O00141 431 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 CREB3O43889 395 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 PSMD10O75832 226 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 CFHP08603 1231 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 KITP10721 976 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 ANPEPP15144 967 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 SCNN1BP51168 640 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 GEMIN4P57678 1058 aaKnown RBP16.71■□□□□ 0.27
CKAP4-201ENST00000378026 RASA2Q15283 850 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 SYCP2LQ5T4T6 812 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 CENPUQ71F23 418 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 AMIGO3Q86WK7 504 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 TDRPQ86YL5 185 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 PAFAH2Q99487 392 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 TMX4Q9H1E5 349 aaPredicted RBP16.71■□□□□ 0.27
CKAP4-201ENST00000378026 GPRC5CQ9NQ84 441 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 NARFQ9UHQ1 456 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 GAKO14976 1311 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 ATRNL1Q5VV63 1379 aa16.71■□□□□ 0.27
CKAP4-201ENST00000378026 HLA-DOAP06340 250 aa16.71■□□□□ 0.26
CKAP4-201ENST00000378026 ARP10275 920 aa16.71■□□□□ 0.26
CKAP4-201ENST00000378026 RXRBP28702 533 aa16.71■□□□□ 0.26
CKAP4-201ENST00000378026 NSFP46459 744 aaKnown RBP16.71■□□□□ 0.26
CKAP4-201ENST00000378026 DSG1Q02413 1049 aa16.71■□□□□ 0.26
CKAP4-201ENST00000378026 LMBRD2Q68DH5 695 aaPredicted RBP16.71■□□□□ 0.26
CKAP4-201ENST00000378026 C3orf62Q6ZUJ4 267 aa16.71■□□□□ 0.26
CKAP4-201ENST00000378026 PTF1AQ7RTS3 328 aa16.71■□□□□ 0.26
CKAP4-201ENST00000378026 RELL1Q8IUW5 271 aa16.71■□□□□ 0.26
CKAP4-201ENST00000378026 RHOT1Q8IXI2 618 aa16.71■□□□□ 0.26
CKAP4-201ENST00000378026 PYROXD1Q8WU10 500 aa16.71■□□□□ 0.26
CKAP4-201ENST00000378026 OPTNQ96CV9 577 aa16.71■□□□□ 0.26
CKAP4-201ENST00000378026 ACCSQ96QU6 501 aa16.71■□□□□ 0.26
CKAP4-201ENST00000378026 LARSQ9P2J5 1176 aaKnown RBP16.71■□□□□ 0.26
CKAP4-201ENST00000378026 SAE1Q9UBE0 346 aaPredicted RBP16.71■□□□□ 0.26
CKAP4-201ENST00000378026 MARCOQ9UEW3 520 aaPredicted RBP16.71■□□□□ 0.26
CKAP4-201ENST00000378026 UBE4BO95155 1302 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 A6NJR5 290 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 ATP2A1O14983 1001 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 CIITAP33076 1130 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 SLC1A1P43005 524 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 RIPOR1Q6ZS17 1223 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 SHKBP1Q8TBC3 707 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 VTI1AQ96AJ9 217 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 FAM163AQ96GL9 167 aaPredicted RBP16.7■□□□□ 0.26
CKAP4-201ENST00000378026 ZNF577Q9BSK1 485 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 KIFC3Q9BVG8 833 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 FAM192AQ9GZU8 254 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 VCX3BQ9H321 246 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 VCX3AQ9NNX9 186 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 ANGPTL2Q9UKU9 493 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 TAF1LQ8IZX4 1826 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 RNASEH1O60930 286 aaKnown RBP16.7■□□□□ 0.26
CKAP4-201ENST00000378026 RARBP10826 455 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 DYNLT1P63172 113 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 ZC3H12AQ5D1E8 599 aaKnown RBP16.7■□□□□ 0.26
CKAP4-201ENST00000378026 ZNF276Q8N554 614 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 SKA1Q96BD8 255 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 OXNAD1Q96HP4 312 aaPredicted RBP16.7■□□□□ 0.26
CKAP4-201ENST00000378026 NDE1Q9NXR1 346 aa16.7■□□□□ 0.26
CKAP4-201ENST00000378026 PPARGC1AQ9UBK2 798 aaKnown RBP16.7■□□□□ 0.26
CKAP4-201ENST00000378026 UMODL1Q5DID0 1318 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 E5RJQ4 531 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 P4HA2O15460 535 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 LIASO43766 372 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 LPXNO60711 386 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 PROSCO94903 275 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 PEX3P56589 373 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 SNRNP35Q16560 246 aaKnown RBP16.69■□□□□ 0.26
CKAP4-201ENST00000378026 LIN52Q52LA3 116 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 C1orf146Q5VVC0 180 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 KRT39Q6A163 491 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 NLRX1Q86UT6 975 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 RHPN2Q8IUC4 686 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 RBM15BQ8NDT2 890 aaKnown RBP16.69■□□□□ 0.26
CKAP4-201ENST00000378026 CCDC110Q8TBZ0 833 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms