RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 RAD23AP54725 363 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 LGALS3BPQ08380 585 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 BIKQ13323 160 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 OR8H2Q8N162 312 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 TSPYL6Q8N831 410 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 PIGSQ96S52 555 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 XPO7Q9UIA9 1087 aaKnown RBP11.08□□□□□ -0.64
RTN3-206ENST00000377819 RAD17O75943 681 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 NFICP08651 508 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 MYBL1P10243 752 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 GNA15P30679 374 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 ARL3P36405 182 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 KLHL12Q53G59 568 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 GALNT4Q8N4A0 578 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 LEMD2Q8NC56 503 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 RASGRP4Q8TDF6 673 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 FAM213AQ9BRX8 229 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 CNPY3Q9BT09 278 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 WWOXQ9NZC7 414 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 SMG5Q9UPR3 1016 aaKnown RBP11.08□□□□□ -0.64
RTN3-206ENST00000377819 AIM2O14862 343 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 PRODHO43272 600 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 GYS1P13807 737 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 MAPK1P28482 360 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 MAGEA10P43363 369 aaPredicted RBP11.08□□□□□ -0.64
RTN3-206ENST00000377819 SARSP49591 514 aaKnown RBP11.08□□□□□ -0.64
RTN3-206ENST00000377819 PADI6Q6TGC4 694 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 MTSS1LQ765P7 747 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 BNIPLQ7Z465 357 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 ZNF564Q8TBZ8 553 aaPredicted RBP11.08□□□□□ -0.64
RTN3-206ENST00000377819 KIF12Q96FN5 646 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 SLC4A9Q96Q91 983 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 VTA1Q9NP79 307 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 TRIM10Q9UDY6 481 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 N6AMT1Q9Y5N5 214 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 XPO1O14980 1071 aaKnown RBP11.08□□□□□ -0.64
RTN3-206ENST00000377819 CCNB2O95067 398 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 ENO1P06733 434 aaKnown RBP11.08□□□□□ -0.64
RTN3-206ENST00000377819 IL12RB1P42701 662 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 HIRAP54198 1017 aaPredicted RBP11.08□□□□□ -0.64
RTN3-206ENST00000377819 MTMR1Q13613 665 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 TAF13Q15543 124 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 TAB1Q15750 504 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 SMAD1Q15797 465 aaKnown RBP11.08□□□□□ -0.64
RTN3-206ENST00000377819 PMF1Q6P1K2 205 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 KIAA0408Q6ZU52 694 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 CASP10Q92851 521 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 CAAP1Q9H8G2 361 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 COMMD9Q9P000 198 aa11.08□□□□□ -0.64
RTN3-206ENST00000377819 BLMP54132 1417 aaPredicted RBP11.07□□□□□ -0.64
RTN3-206ENST00000377819 PREX1Q8TCU6 1659 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 IQCA1LA6NCM1 817 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 STXBP3O00186 592 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 TNPO2O14787 897 aaKnown RBP11.07□□□□□ -0.64
RTN3-206ENST00000377819 NUDT14O95848 222 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 ACTN3Q08043 901 aaPredicted RBP11.07□□□□□ -0.64
RTN3-206ENST00000377819 MIIPQ5JXC2 388 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 IZUMO3Q5VZ72 239 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 CDC73Q6P1J9 531 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 NLRP10Q86W26 655 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 DCP1BQ8IZD4 617 aaKnown RBP11.07□□□□□ -0.64
RTN3-206ENST00000377819 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.07□□□□□ -0.643e-7■■■□□ 19.1
RTN3-206ENST00000377819 TBCDQ9BTW9 1192 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 RMND5AQ9H871 391 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 WDR35Q9P2L0 1181 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 MED23Q9ULK4 1368 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 MYO5BQ9ULV0 1848 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 FAM220BPB1ANY3 271 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 KBTBD13C9JR72 458 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 PRMT3O60678 531 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 MYL2P10916 166 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 SOX11P35716 441 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 PLOD1Q02809 727 aaPredicted RBP11.07□□□□□ -0.64
RTN3-206ENST00000377819 RDM1Q8NG50 284 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 PRKD2Q9BZL6 878 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 ROGDIQ9GZN7 287 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 RACGAP1Q9H0H5 632 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 CDY2AQ9Y6F7 541 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 CDY1Q9Y6F8 540 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 ADGRA2Q96PE1 1338 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 MGAT4DA6NG13 374 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 MTSS1O43312 755 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 MGRN1O60291 552 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 PGM3O95394 542 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 LCA5LO95447 670 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 APRTP07741 180 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 PABPC1P11940 636 aaKnown RBP11.07□□□□□ -0.64
RTN3-206ENST00000377819 HSPA13P48723 471 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 EIF3EP60228 445 aaKnown RBP11.07□□□□□ -0.64
RTN3-206ENST00000377819 KCNH2Q12809 1159 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 ERFEQ4G0M1 354 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 ZRANB3Q5FWF4 1079 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 DGKKQ5KSL6 1271 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 OLFML2BQ68BL8 750 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 DNAJC1Q96KC8 554 aaKnown RBP11.07□□□□□ -0.64
RTN3-206ENST00000377819 MED15Q96RN5 788 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 CEP44Q9C0F1 390 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 AAASQ9NRG9 546 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 LMBRD1Q9NUN5 540 aa11.07□□□□□ -0.64
RTN3-206ENST00000377819 PDE5AO76074 875 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms