RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 PDIA4P13667 645 aaKnown RBP22.72■■□□□ 1.23
VSX1-201ENST00000376707 TUFMP49411 452 aaKnown RBP22.72■■□□□ 1.23
VSX1-201ENST00000376707 ALCAMQ13740 583 aa22.72■■□□□ 1.23
VSX1-201ENST00000376707 SV2CQ496J9 727 aa22.72■■□□□ 1.23
VSX1-201ENST00000376707 DNAJB7Q7Z6W7 309 aaPredicted RBP22.72■■□□□ 1.23
VSX1-201ENST00000376707 MFSD6LQ8IWD5 586 aa22.72■■□□□ 1.23
VSX1-201ENST00000376707 YAF2Q8IY57 180 aa22.72■■□□□ 1.23
VSX1-201ENST00000376707 FAM200AQ8TCP9 573 aa22.72■■□□□ 1.23
VSX1-201ENST00000376707 PSMG2Q969U7 264 aa22.72■■□□□ 1.23
VSX1-201ENST00000376707 SAAL1Q96ER3 474 aa22.72■■□□□ 1.23
VSX1-201ENST00000376707 ZNF560Q96MR9 790 aa22.72■■□□□ 1.23
VSX1-201ENST00000376707 SEPT5Q99719 369 aaPredicted RBP22.72■■□□□ 1.23
VSX1-201ENST00000376707 ZCWPW1Q9H0M4 648 aa22.72■■□□□ 1.23
VSX1-201ENST00000376707 TRPV5Q9NQA5 729 aa22.72■■□□□ 1.23
VSX1-201ENST00000376707 PTPRZ1P23471 2315 aaPredicted RBP22.71■■□□□ 1.23
VSX1-201ENST00000376707 MIA3Q5JRA6 1907 aa22.71■■□□□ 1.23
VSX1-201ENST00000376707 HEPACAM2A8MVW5 462 aa22.71■■□□□ 1.23
VSX1-201ENST00000376707 KPNA7A9QM74 516 aa22.71■■□□□ 1.23
VSX1-201ENST00000376707 FGF19O95750 216 aa22.71■■□□□ 1.23
VSX1-201ENST00000376707 LDHAP00338 332 aaKnown RBP22.71■■□□□ 1.23
VSX1-201ENST00000376707 RPS9P46781 194 aaKnown RBP22.71■■□□□ 1.23
VSX1-201ENST00000376707 CASP5P51878 434 aa22.71■■□□□ 1.23
VSX1-201ENST00000376707 TFAMQ00059 246 aaKnown RBP22.71■■□□□ 1.23
VSX1-201ENST00000376707 CSTF1Q05048 431 aaKnown RBP22.71■■□□□ 1.23
VSX1-201ENST00000376707 VEPH1Q14D04 833 aa22.71■■□□□ 1.23
VSX1-201ENST00000376707 STK38Q15208 465 aa22.71■■□□□ 1.23
VSX1-201ENST00000376707 ZNF528Q3MIS6 628 aa22.71■■□□□ 1.23
VSX1-201ENST00000376707 MGAT5BQ3V5L5 792 aa22.71■■□□□ 1.23
VSX1-201ENST00000376707 WSCD1Q658N2 575 aa22.71■■□□□ 1.23
VSX1-201ENST00000376707 PDILTQ8N807 584 aa22.71■■□□□ 1.23
VSX1-201ENST00000376707 LINC00301Q8NCQ3 95 aa22.71■■□□□ 1.23
VSX1-201ENST00000376707 ATXN3LQ9H3M9 355 aa22.71■■□□□ 1.23
VSX1-201ENST00000376707 PANK4Q9NVE7 773 aa22.71■■□□□ 1.23
VSX1-201ENST00000376707 NDRG2Q9UN36 371 aaKnown RBP22.71■■□□□ 1.23
VSX1-201ENST00000376707 VPS13AQ96RL7 3174 aa22.71■■□□□ 1.23
VSX1-201ENST00000376707 RIF1Q5UIP0 2472 aaKnown RBP22.7■■□□□ 1.22
VSX1-201ENST00000376707 CFAP54Q96N23 3096 aa22.7■■□□□ 1.22
VSX1-201ENST00000376707 A0A087X0B3 334 aa22.7■■□□□ 1.22
VSX1-201ENST00000376707 GARTP22102 1010 aa22.7■■□□□ 1.22
VSX1-201ENST00000376707 PNPLA4P41247 253 aa22.7■■□□□ 1.22
VSX1-201ENST00000376707 CDR1P51861 262 aa22.7■■□□□ 1.22
VSX1-201ENST00000376707 ARHGAP15Q53QZ3 475 aa22.7■■□□□ 1.22
VSX1-201ENST00000376707 STXBP5Q5T5C0 1151 aa22.7■■□□□ 1.22
VSX1-201ENST00000376707 BRSK2Q8IWQ3 736 aa22.7■■□□□ 1.22
VSX1-201ENST00000376707 RBAKQ9NYW8 714 aaPredicted RBP22.7■■□□□ 1.22
VSX1-201ENST00000376707 PIAS3Q9Y6X2 628 aa22.7■■□□□ 1.22
VSX1-201ENST00000376707 NCANO14594 1321 aa22.69■■□□□ 1.22
VSX1-201ENST00000376707 FRMD3A2A2Y4 597 aa22.69■■□□□ 1.22
VSX1-201ENST00000376707 SHISA7A6NL88 538 aa22.69■■□□□ 1.22
VSX1-201ENST00000376707 KINO60870 393 aaKnown RBP22.69■■□□□ 1.22
VSX1-201ENST00000376707 PPP6R2O75170 966 aa22.69■■□□□ 1.22
VSX1-201ENST00000376707 GABRR2P28476 465 aa22.69■■□□□ 1.22
VSX1-201ENST00000376707 SMARCB1Q12824 385 aa22.69■■□□□ 1.22
VSX1-201ENST00000376707 TAF12Q16514 161 aa22.69■■□□□ 1.22
VSX1-201ENST00000376707 GAREM2Q75VX8 874 aa22.69■■□□□ 1.22
VSX1-201ENST00000376707 HSCBQ8IWL3 235 aa22.69■■□□□ 1.22
VSX1-201ENST00000376707 CCDC65Q8IXS2 484 aa22.69■■□□□ 1.22
VSX1-201ENST00000376707 CSGALNACT1Q8TDX6 532 aa22.69■■□□□ 1.22
VSX1-201ENST00000376707 NOC3LQ8WTT2 800 aaKnown RBP22.69■■□□□ 1.22
VSX1-201ENST00000376707 C2orf15Q8WU43 125 aaKnown RBP22.69■■□□□ 1.22
VSX1-201ENST00000376707 CACTINQ8WUQ7 758 aaKnown RBP22.69■■□□□ 1.22
VSX1-201ENST00000376707 FAM3CQ92520 227 aa22.69■■□□□ 1.22
VSX1-201ENST00000376707 BORCS6Q96GS4 357 aa22.69■■□□□ 1.22
VSX1-201ENST00000376707 ZNF396Q96N95 335 aaPredicted RBP22.69■■□□□ 1.22
VSX1-201ENST00000376707 LPIN3Q9BQK8 851 aa22.69■■□□□ 1.22
VSX1-201ENST00000376707 TMEM206Q9H813 350 aa22.69■■□□□ 1.22
VSX1-201ENST00000376707 FAM186AA6NE01 2351 aa22.68■■□□□ 1.22
VSX1-201ENST00000376707 DPYSL4O14531 572 aa22.68■■□□□ 1.22
VSX1-201ENST00000376707 SPTLC2O15270 562 aa22.68■■□□□ 1.22
VSX1-201ENST00000376707 ITGB3P05106 788 aa22.68■■□□□ 1.22
VSX1-201ENST00000376707 POLR2BP30876 1174 aaKnown RBP22.68■■□□□ 1.22
VSX1-201ENST00000376707 WNT7BP56706 349 aa22.68■■□□□ 1.22
VSX1-201ENST00000376707 FZD5Q13467 585 aa22.68■■□□□ 1.22
VSX1-201ENST00000376707 GPR158Q5T848 1215 aa22.68■■□□□ 1.22
VSX1-201ENST00000376707 GPIHBP1Q8IV16 184 aa22.68■■□□□ 1.22
VSX1-201ENST00000376707 ARID3BQ8IVW6 561 aaPredicted RBP22.68■■□□□ 1.22
VSX1-201ENST00000376707 DCP1BQ8IZD4 617 aaKnown RBP22.68■■□□□ 1.22
VSX1-201ENST00000376707 ZSWIM2Q8NEG5 633 aa22.68■■□□□ 1.22
VSX1-201ENST00000376707 SPPL2BQ8TCT7 592 aa22.68■■□□□ 1.22
VSX1-201ENST00000376707 RSPRY1Q96DX4 576 aa22.68■■□□□ 1.22
VSX1-201ENST00000376707 GCNAQ96QF7 691 aa22.68■■□□□ 1.22
VSX1-201ENST00000376707 HINFPQ9BQA5 517 aa22.68■■□□□ 1.22
VSX1-201ENST00000376707 CBWD1Q9BRT8 395 aa22.68■■□□□ 1.22
VSX1-201ENST00000376707 FGFBP2Q9BYJ0 223 aa22.68■■□□□ 1.22
VSX1-201ENST00000376707 ABI2Q9NYB9 513 aaPredicted RBP22.68■■□□□ 1.22
VSX1-201ENST00000376707 AGAP1Q9UPQ3 857 aa22.68■■□□□ 1.22
VSX1-201ENST00000376707 TSC2P49815 1807 aa22.68■■□□□ 1.22
VSX1-201ENST00000376707 ANK1P16157 1881 aa22.67■■□□□ 1.22
VSX1-201ENST00000376707 GOLGA8IPA6NC78 632 aa22.67■■□□□ 1.22
VSX1-201ENST00000376707 GOLGA8JA6NMD2 632 aa22.67■■□□□ 1.22
VSX1-201ENST00000376707 EXTL3O43909 919 aa22.67■■□□□ 1.22
VSX1-201ENST00000376707 PRPF6O94906 941 aaKnown RBP22.67■■□□□ 1.22
VSX1-201ENST00000376707 YEATS4O95619 227 aa22.67■■□□□ 1.22
VSX1-201ENST00000376707 ATF6P18850 670 aa22.67■■□□□ 1.22
VSX1-201ENST00000376707 STXBP4Q6ZWJ1 553 aa22.67■■□□□ 1.22
VSX1-201ENST00000376707 LRRTM3Q86VH5 581 aa22.67■■□□□ 1.22
VSX1-201ENST00000376707 LRRC27Q9C0I9 530 aa22.67■■□□□ 1.22
VSX1-201ENST00000376707 PCIF1Q9H4Z3 704 aa22.67■■□□□ 1.22
VSX1-201ENST00000376707 CHADO15335 359 aa22.66■■□□□ 1.22
VSX1-201ENST00000376707 CDC25CP30307 473 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms