RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 ST3GAL5Q9UNP4 418 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 MED7O43513 233 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 GNRH1P01148 92 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 PTPN11Q06124 597 aaPredicted RBP18.8■□□□□ 0.6
CTTN-203ENST00000376561 MGAT3Q09327 533 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 ORC1Q13415 861 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 PTGISQ16647 500 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 PLEKHA7Q6IQ23 1121 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 RNF180Q86T96 592 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 WDTC1Q8N5D0 677 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 LRRC52Q8N7C0 313 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 UBL4BQ8N7F7 174 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 KRT35Q92764 455 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 TSPAN18Q96SJ8 248 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 TRIM7Q9C029 511 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 WNT8AQ9H1J5 351 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 MRPL47Q9HD33 250 aaKnown RBP18.8■□□□□ 0.6
CTTN-203ENST00000376561 BARX2Q9UMQ3 279 aaPredicted RBP18.8■□□□□ 0.6
CTTN-203ENST00000376561 CEP83Q9Y592 693 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 TLR3O15455 904 aaKnown RBP18.79■□□□□ 0.6
CTTN-203ENST00000376561 SPOPO43791 374 aa18.79■□□□□ 0.6
CTTN-203ENST00000376561 KCNE1P15382 129 aa18.79■□□□□ 0.6
CTTN-203ENST00000376561 NFX1Q12986 1120 aaKnown RBP18.79■□□□□ 0.6
CTTN-203ENST00000376561 MAMLD1Q13495 774 aa18.79■□□□□ 0.6
CTTN-203ENST00000376561 CPNE8Q86YQ8 564 aa18.79■□□□□ 0.6
CTTN-203ENST00000376561 ARFGAP3Q9NP61 516 aa18.79■□□□□ 0.6
CTTN-203ENST00000376561 TTC7AQ9ULT0 858 aaPredicted RBP18.79■□□□□ 0.6
CTTN-203ENST00000376561 MARCKSL1P49006 195 aa18.78■□□□□ 0.6
CTTN-203ENST00000376561 C9orf57Q5W0N0 161 aa18.78■□□□□ 0.6
CTTN-203ENST00000376561 TTC39CQ8N584 583 aa18.78■□□□□ 0.6
CTTN-203ENST00000376561 ARRDC4Q8NCT1 418 aa18.78■□□□□ 0.6
CTTN-203ENST00000376561 HNRNPLLQ8WVV9 542 aaKnown RBP18.78■□□□□ 0.6
CTTN-203ENST00000376561 LHX5Q9H2C1 402 aa18.78■□□□□ 0.6
CTTN-203ENST00000376561 SCINQ9Y6U3 715 aa18.78■□□□□ 0.6
CTTN-203ENST00000376561 MYO1FO00160 1098 aa18.78■□□□□ 0.6
CTTN-203ENST00000376561 SEC31AO94979 1220 aaKnown RBP18.78■□□□□ 0.6
CTTN-203ENST00000376561 ZRANB2O95218 330 aaKnown RBP eCLIP18.78■□□□□ 0.61e-17■■■□□ 18.8
CTTN-203ENST00000376561 CD4P01730 458 aa18.78■□□□□ 0.6
CTTN-203ENST00000376561 CALB1P05937 261 aa18.78■□□□□ 0.6
CTTN-203ENST00000376561 THPOP40225 353 aa18.78■□□□□ 0.6
CTTN-203ENST00000376561 PEX5P50542 639 aa18.78■□□□□ 0.6
CTTN-203ENST00000376561 NDST1P52848 882 aa18.78■□□□□ 0.6
CTTN-203ENST00000376561 ITGA7Q13683 1181 aa18.78■□□□□ 0.6
CTTN-203ENST00000376561 DENND1BQ6P3S1 775 aa18.78■□□□□ 0.6
CTTN-203ENST00000376561 RNPC3Q96LT9 517 aaKnown RBP18.78■□□□□ 0.6
CTTN-203ENST00000376561 PARVAQ9NVD7 372 aa18.78■□□□□ 0.6
CTTN-203ENST00000376561 SNX9Q9Y5X1 595 aa18.78■□□□□ 0.6
CTTN-203ENST00000376561 CCDC66A2RUB6 948 aa18.77■□□□□ 0.6
CTTN-203ENST00000376561 XPOTO43592 962 aaKnown RBP18.77■□□□□ 0.6
CTTN-203ENST00000376561 CABYRO75952 493 aa18.77■□□□□ 0.6
CTTN-203ENST00000376561 MCM3P25205 808 aa18.77■□□□□ 0.6
CTTN-203ENST00000376561 CTNNA1P35221 906 aaKnown RBP18.77■□□□□ 0.6
CTTN-203ENST00000376561 ACLYP53396 1101 aa18.77■□□□□ 0.6
CTTN-203ENST00000376561 GLE1Q53GS7 698 aaKnown RBP18.77■□□□□ 0.6
CTTN-203ENST00000376561 C8orf74Q6P047 294 aa18.77■□□□□ 0.6
CTTN-203ENST00000376561 HDAC7Q8WUI4 952 aa18.77■□□□□ 0.6
CTTN-203ENST00000376561 CHST12Q9NRB3 414 aa18.77■□□□□ 0.6
CTTN-203ENST00000376561 BRCA2P51587 3418 aa18.77■□□□□ 0.6
CTTN-203ENST00000376561 PIRO00625 290 aa18.77■□□□□ 0.59
CTTN-203ENST00000376561 CTNNA2P26232 953 aa18.77■□□□□ 0.59
CTTN-203ENST00000376561 MRPS25P82663 173 aaKnown RBP18.77■□□□□ 0.59
CTTN-203ENST00000376561 ZNF211Q13398 564 aaPredicted RBP18.77■□□□□ 0.59
CTTN-203ENST00000376561 ERICH1Q86X53 443 aa18.77■□□□□ 0.59
CTTN-203ENST00000376561 AP1M1Q9BXS5 423 aa18.77■□□□□ 0.59
CTTN-203ENST00000376561 DMGDHQ9UI17 866 aaKnown RBP18.77■□□□□ 0.59
CTTN-203ENST00000376561 PCDHA3Q9Y5H8 950 aa18.77■□□□□ 0.59
CTTN-203ENST00000376561 GPR182O15218 404 aa18.76■□□□□ 0.59
CTTN-203ENST00000376561 ERLIN1O75477 346 aa18.76■□□□□ 0.59
CTTN-203ENST00000376561 ZMYND10O75800 440 aa18.76■□□□□ 0.59
CTTN-203ENST00000376561 FGGP02679 453 aa18.76■□□□□ 0.59
CTTN-203ENST00000376561 INHAP05111 366 aa18.76■□□□□ 0.59
CTTN-203ENST00000376561 VDRP11473 427 aa18.76■□□□□ 0.59
CTTN-203ENST00000376561 ATF7P17544 494 aaPredicted RBP18.76■□□□□ 0.59
CTTN-203ENST00000376561 HEXIM2Q96MH2 286 aaKnown RBP18.76■□□□□ 0.59
CTTN-203ENST00000376561 KRT12Q99456 494 aa18.76■□□□□ 0.59
CTTN-203ENST00000376561 NT5C1AQ9BXI3 368 aa18.76■□□□□ 0.59
CTTN-203ENST00000376561 AGO3Q9H9G7 860 aaKnown RBP18.76■□□□□ 0.59
CTTN-203ENST00000376561 FAM105AQ9NUU6 356 aa18.76■□□□□ 0.59
CTTN-203ENST00000376561 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.76■□□□□ 0.59
CTTN-203ENST00000376561 KRIT1O00522 736 aa18.76■□□□□ 0.59
CTTN-203ENST00000376561 CYP3A5P20815 502 aa18.76■□□□□ 0.59
CTTN-203ENST00000376561 SLC1A1P43005 524 aa18.76■□□□□ 0.59
CTTN-203ENST00000376561 SOX4Q06945 474 aaPredicted RBP18.76■□□□□ 0.59
CTTN-203ENST00000376561 FBXO47Q5MNV8 452 aa18.76■□□□□ 0.59
CTTN-203ENST00000376561 FEZF2Q8TBJ5 459 aa18.76■□□□□ 0.59
CTTN-203ENST00000376561 OSBPL7Q9BZF2 842 aa18.76■□□□□ 0.59
CTTN-203ENST00000376561 TRMT13Q9NUP7 481 aaKnown RBP18.76■□□□□ 0.59
CTTN-203ENST00000376561 CYTH4Q9UIA0 394 aa18.76■□□□□ 0.59
CTTN-203ENST00000376561 TCRBV5S1A1TA0A578 114 aa18.75■□□□□ 0.59
CTTN-203ENST00000376561 O00370 1275 aa18.75■□□□□ 0.59
CTTN-203ENST00000376561 FKTNO75072 461 aa18.75■□□□□ 0.59
CTTN-203ENST00000376561 PROSCO94903 275 aa18.75■□□□□ 0.59
CTTN-203ENST00000376561 HTRA3P83110 453 aa18.75■□□□□ 0.59
CTTN-203ENST00000376561 SLC7A5Q01650 507 aa18.75■□□□□ 0.59
CTTN-203ENST00000376561 PTK7Q13308 1070 aa18.75■□□□□ 0.59
CTTN-203ENST00000376561 CNGA2Q16280 664 aa18.75■□□□□ 0.59
CTTN-203ENST00000376561 LONRF2Q1L5Z9 754 aa18.75■□□□□ 0.59
CTTN-203ENST00000376561 SGO2Q562F6 1265 aa18.75■□□□□ 0.59
CTTN-203ENST00000376561 BEND6Q5SZJ8 279 aaPredicted RBP18.75■□□□□ 0.59
CTTN-203ENST00000376561 ZNF784Q8NCA9 323 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms