RNA–Protein interactions for RNA: ENST00000376251.5

CACNA1F-202, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 5,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-202ENST00000376251 WHAMMQ8TF30 809 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 TRIM54Q9BYV2 358 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 XRN1Q8IZH2 1706 aaKnown RBP13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 ANKRD26Q9UPS8 1709 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 CHD2O14647 1828 aaKnown RBP13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 ANO9A1A5B4 782 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 CTNNB1P35222 781 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 SYTL3Q4VX76 610 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 CARNMT1Q8N4J0 409 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 TMC2Q8TDI7 906 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 EML1O00423 815 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 PSMD3O43242 534 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 MAPTP10636 758 aaKnown RBP13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 KLK7P49862 253 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 RASSF2P50749 326 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 PCSK7Q16549 785 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 RABGAP1LQ5R372 815 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 OSBPL9Q96SU4 736 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 RRAGDQ9NQL2 400 aaPredicted RBP13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 THG1LQ9NWX6 298 aaKnown RBP13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 CNTNAP2Q9UHC6 1331 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 KRT38O76015 456 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 CCDC137Q6PK04 289 aaKnown RBP13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 DDI1Q8WTU0 396 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 PGLYRP2Q96PD5 576 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 VPS11Q9H270 941 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 NFU1Q9UMS0 254 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 PRR23AA6NEV1 266 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 ATMINO43313 823 aaPredicted RBP13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 ARSEP51690 589 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 SFSWAPQ12872 951 aaKnown RBP13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 ZNF558Q96NG5 402 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 SYT15Q9BQS2 421 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 TSSK1BQ9BXA7 367 aa13.7□□□□□ -0.22
CACNA1F-202ENST00000376251 SLC12A8A0AV02 714 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 CCDC160A6NGH7 325 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 POU5F1BQ06416 359 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 HP1BP3Q5SSJ5 553 aaPredicted RBP13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 FIBCD1Q8N539 461 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 KBTBD4Q9NVX7 518 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 SLC25A13Q9UJS0 675 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 FBXL21Q9UKT6 434 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 RGPD8O14715 1765 aaPredicted RBP13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 WDR91A4D1P6 747 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 NBPF20Q3BBV1 942 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 SH2D4BQ5SQS7 431 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 FBXL16Q8N461 479 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 SPIRE2Q8WWL2 714 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 ULK4Q96C45 1275 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 CINPQ9BW66 212 aaPredicted RBP13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 AGXT2Q9BYV1 514 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 ADGRG1Q9Y653 693 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 CARNS1A5YM72 827 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 EPHB2P29323 1055 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 ARL4DP49703 201 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 KPNA1P52294 538 aaPredicted RBP13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 SATB1Q01826 763 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 SMTNL2Q2TAL5 461 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 MTHFD1LQ6UB35 978 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 ELOA2Q8IYF1 753 aaPredicted RBP13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 FEZF2Q8TBJ5 459 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 FTHL17Q9BXU8 183 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 ATXN3LQ9H3M9 355 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 PIK3CDO00329 1044 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 MNAT1P51948 309 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 PDIA2Q13087 525 aaKnown RBP13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 SHROOM1Q2M3G4 852 aaPredicted RBP13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 HERC6Q8IVU3 1022 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 SCFD1Q8WVM8 642 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 GAD1Q99259 594 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 CELF4Q9BZC1 486 aaKnown RBP13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 CYP3A43Q9HB55 503 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 TLR8Q9NR97 1041 aaKnown RBP13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 PDGFCQ9NRA1 345 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 USP20Q9Y2K6 914 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 UBIAD1Q9Y5Z9 338 aa13.69□□□□□ -0.22
CACNA1F-202ENST00000376251 FZD9O00144 591 aa13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 WEE1P30291 646 aa13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 EARS2Q5JPH6 523 aaKnown RBP13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 TMEM176AQ96HP8 235 aa13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 DRC3Q9H069 523 aa13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 MRPL17Q9NRX2 175 aaKnown RBP13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 NFASCO94856 1347 aa13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 LACTBL1A8MY62 500 aa13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 RNASEH1O60930 286 aaKnown RBP13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 PDK1Q15118 436 aa13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 PPM1NQ8N819 430 aa13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 SSU72P8A0A1W2PR75 194 aa13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 TLL1O43897 1013 aa13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 SESN2P58004 480 aaPredicted RBP13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 POLD3Q15054 466 aaPredicted RBP13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 SYCP2LQ5T4T6 812 aa13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 RNPC3Q96LT9 517 aaKnown RBP13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 RAB3IPQ96QF0 476 aaPredicted RBP13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 DDX47Q9H0S4 455 aaKnown RBP13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 HIPK3Q9H422 1215 aa13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 ZBTB39O15060 712 aa13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 MAP3K13O43283 966 aa13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 ASS1P00966 412 aaKnown RBP13.68□□□□□ -0.22
CACNA1F-202ENST00000376251 ACAT1P24752 427 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms