RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 UROC1Q96N76 676 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 ZSWIM1Q9BR11 485 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 FTHL17Q9BXU8 183 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 SMYD3Q9H7B4 428 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 NXF1Q9UBU9 619 aaKnown RBP11.83□□□□□ -0.52
PDPN-202ENST00000376057 PARP2Q9UGN5 583 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 STRIP2Q9ULQ0 834 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 NOD1Q9Y239 953 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 HES2Q9Y543 173 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 TMCO5BA8MYB1 307 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 PITPNM1O00562 1244 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 AKAP5P24588 427 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 TAF6P49848 677 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 ARHGAP17Q68EM7 881 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 LCLAT1Q6UWP7 414 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 PEX26Q7Z412 305 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 ZNF598Q86UK7 904 aaKnown RBP11.82□□□□□ -0.52
PDPN-202ENST00000376057 CRYBG2Q8N1P7 616 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 CD101Q93033 1021 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 ZNF653Q96CK0 615 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 NT5C1AQ9BXI3 368 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 ELOVL4Q9GZR5 314 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 WNT8AQ9H1J5 351 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 CXCL16Q9H2A7 254 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 OSGEPQ9NPF4 335 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 CTTNBP2NLQ9P2B4 639 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.82□□□□□ -0.52
PDPN-202ENST00000376057 CEP83Q9Y592 693 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 SETSIPP0DME0 302 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 ABCB4P21439 1286 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 WARSP23381 471 aaKnown RBP11.82□□□□□ -0.52
PDPN-202ENST00000376057 BFSP2Q13515 415 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 CFAP221Q4G0U5 840 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 DAAM2Q86T65 1068 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 FAM126BQ8IXS8 530 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 MMGT1Q8N4V1 131 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 WDTC1Q8N5D0 677 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 ZNF564Q8TBZ8 553 aaPredicted RBP11.82□□□□□ -0.52
PDPN-202ENST00000376057 TFAP2BQ92481 460 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 C18orf25Q96B23 403 aaPredicted RBP11.82□□□□□ -0.52
PDPN-202ENST00000376057 NUP85Q9BW27 656 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 MIS12Q9H081 205 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 CYLDQ9NQC7 956 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 PARVAQ9NVD7 372 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 WDR35Q9P2L0 1181 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 CNOT8Q9UFF9 292 aaKnown RBP11.82□□□□□ -0.52
PDPN-202ENST00000376057 KPNA7A9QM74 516 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 DDX3YO15523 660 aaKnown RBP11.82□□□□□ -0.52
PDPN-202ENST00000376057 CD58P19256 250 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 CD52P31358 61 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 AARSP49588 968 aaKnown RBP eCLIP11.82□□□□□ -0.52
PDPN-202ENST00000376057 NAA35Q5VZE5 725 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 AGMOQ6ZNB7 445 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 STK32AQ8WU08 396 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 UBXN4Q92575 508 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 DDX27Q96GQ7 796 aaKnown RBP11.82□□□□□ -0.52
PDPN-202ENST00000376057 SELENOOQ9BVL4 669 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 TANC1Q9C0D5 1861 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 UNC93B1Q9H1C4 597 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 CARD9Q9H257 536 aa11.82□□□□□ -0.52
PDPN-202ENST00000376057 ELAC1Q9H777 363 aaKnown RBP11.82□□□□□ -0.52
PDPN-202ENST00000376057 THP07101 528 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 SELPP16109 830 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 HSPA6P17066 643 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 RPL34P49207 117 aaKnown RBP11.81□□□□□ -0.52
PDPN-202ENST00000376057 HTRA3P83110 453 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 SGO2Q562F6 1265 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 PPP1R15BQ5SWA1 713 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 ANKRD33Q7Z3H0 272 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 MSANTD4Q8NCY6 345 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 PDCL3Q9H2J4 239 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 ADAM22Q9P0K1 906 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 TMEM59LQ9UK28 342 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 ARL5CA6NH57 179 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 O00370 1275 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 FTCDO95954 541 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 CTSHP09668 335 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 GUCY2FP51841 1108 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 MAMLD1Q13495 774 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 SOWAHAQ2M3V2 549 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 PKDCCQ504Y2 493 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 TMEM86AQ8N2M4 240 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 CPA5Q8WXQ8 436 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 APBB2Q92870 758 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 TOX2Q96NM4 488 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 ALG6Q9Y672 507 aa11.81□□□□□ -0.52
PDPN-202ENST00000376057 SCN1AP35498 2009 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 TARSL2A2RTX5 802 aaKnown RBP11.8□□□□□ -0.52
PDPN-202ENST00000376057 CCDC66A2RUB6 948 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 TULP1O00294 542 aaPredicted RBP11.8□□□□□ -0.52
PDPN-202ENST00000376057 MGEA5O60502 916 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 CFHP08603 1231 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 BRD2P25440 801 aaKnown RBP11.8□□□□□ -0.52
PDPN-202ENST00000376057 CTNNA1P35221 906 aaKnown RBP11.8□□□□□ -0.52
PDPN-202ENST00000376057 PAFAH1B1P43034 410 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 NDST1P52848 882 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 CDH8P55286 799 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 LILRA4P59901 499 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 SOX4Q06945 474 aaPredicted RBP11.8□□□□□ -0.52
PDPN-202ENST00000376057 NFX1Q12986 1120 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms