RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 KRT80Q6KB66 452 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 METTL7BQ6UX53 244 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 KCNK18Q7Z418 384 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 ASAP3Q8TDY4 903 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 SGSM3Q96HU1 749 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.28□□□□□ -0.12
C9orf47-203ENST00000375851 RIC1Q4ADV7 1423 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 KIZQ2M2Z5 673 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 C15orf52Q6ZUT6 534 aaKnown RBP14.28□□□□□ -0.12
C9orf47-203ENST00000375851 AGR3Q8TD06 166 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 PABPC5Q96DU9 382 aaKnown RBP14.28□□□□□ -0.12
C9orf47-203ENST00000375851 CYFIP2Q96F07 1278 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 CGRRF1Q99675 332 aa14.28□□□□□ -0.12
C9orf47-203ENST00000375851 DMGDHQ9UI17 866 aaKnown RBP14.28□□□□□ -0.12
C9orf47-203ENST00000375851 PHF20L1A8MW92 1017 aa14.27□□□□□ -0.12
C9orf47-203ENST00000375851 HMBSP08397 361 aa14.27□□□□□ -0.12
C9orf47-203ENST00000375851 RAD51Q06609 339 aa14.27□□□□□ -0.12
C9orf47-203ENST00000375851 PDK1Q15118 436 aa14.27□□□□□ -0.12
C9orf47-203ENST00000375851 DCAF4L1Q3SXM0 396 aa14.27□□□□□ -0.12
C9orf47-203ENST00000375851 C1orf146Q5VVC0 180 aa14.27□□□□□ -0.12
C9orf47-203ENST00000375851 ZNF710Q8N1W2 664 aa14.27□□□□□ -0.12
C9orf47-203ENST00000375851 XPO6Q96QU8 1125 aaKnown RBP14.27□□□□□ -0.12
C9orf47-203ENST00000375851 ROPN1BQ9BZX4 212 aaPredicted RBP14.27□□□□□ -0.12
C9orf47-203ENST00000375851 ROPN1Q9HAT0 212 aaPredicted RBP14.27□□□□□ -0.12
C9orf47-203ENST00000375851 FAM47DPA6NHR8 397 aa14.27□□□□□ -0.12
C9orf47-203ENST00000375851 EML1O00423 815 aa14.27□□□□□ -0.12
C9orf47-203ENST00000375851 DPYSL4O14531 572 aa14.27□□□□□ -0.12
C9orf47-203ENST00000375851 SLC26A2P50443 739 aa14.27□□□□□ -0.12
C9orf47-203ENST00000375851 SH3BGRP55822 239 aaPredicted RBP14.27□□□□□ -0.12
C9orf47-203ENST00000375851 ATPAF2Q8N5M1 289 aa14.27□□□□□ -0.12
C9orf47-203ENST00000375851 FAM71DQ8N9W8 422 aa14.27□□□□□ -0.12
C9orf47-203ENST00000375851 SCOCQ9UIL1 159 aa14.27□□□□□ -0.12
C9orf47-203ENST00000375851 ARL2BPQ9Y2Y0 163 aa14.27□□□□□ -0.12
C9orf47-203ENST00000375851 FAM200BP0CF97 657 aa14.27□□□□□ -0.13
C9orf47-203ENST00000375851 GCLCP48506 637 aaPredicted RBP14.27□□□□□ -0.13
C9orf47-203ENST00000375851 WDR93Q6P2C0 686 aa14.27□□□□□ -0.13
C9orf47-203ENST00000375851 SH3RF1Q7Z6J0 888 aa14.27□□□□□ -0.13
C9orf47-203ENST00000375851 DNERQ8NFT8 737 aa14.27□□□□□ -0.13
C9orf47-203ENST00000375851 SLC20A1Q8WUM9 679 aa14.27□□□□□ -0.13
C9orf47-203ENST00000375851 WWP1Q9H0M0 922 aa14.27□□□□□ -0.13
C9orf47-203ENST00000375851 GGT7Q9UJ14 662 aa14.27□□□□□ -0.13
C9orf47-203ENST00000375851 PPP2R3BQ9Y5P8 575 aa14.27□□□□□ -0.13
C9orf47-203ENST00000375851 SMAPO00193 183 aa14.27□□□□□ -0.13
C9orf47-203ENST00000375851 AP3B1O00203 1094 aa14.27□□□□□ -0.13
C9orf47-203ENST00000375851 CCDC22O60826 627 aa14.27□□□□□ -0.13
C9orf47-203ENST00000375851 DDNO94850 711 aaPredicted RBP14.27□□□□□ -0.13
C9orf47-203ENST00000375851 LMNAP02545 664 aaKnown RBP14.27□□□□□ -0.13
C9orf47-203ENST00000375851 AMHR2Q16671 573 aa14.27□□□□□ -0.13
C9orf47-203ENST00000375851 TAS2R42Q7RTR8 314 aa14.27□□□□□ -0.13
C9orf47-203ENST00000375851 NOP9Q86U38 636 aaKnown RBP14.27□□□□□ -0.13
C9orf47-203ENST00000375851 ZNF473Q8WTR7 871 aaKnown RBP14.27□□□□□ -0.13
C9orf47-203ENST00000375851 CASKIN2Q8WXE0 1202 aa14.27□□□□□ -0.13
C9orf47-203ENST00000375851 ATG4AQ8WYN0 398 aa14.27□□□□□ -0.13
C9orf47-203ENST00000375851 HACD3Q9P035 362 aa14.27□□□□□ -0.13
C9orf47-203ENST00000375851 ORC6Q9Y5N6 252 aa14.27□□□□□ -0.13
C9orf47-203ENST00000375851 MEFVO15553 781 aaPredicted RBP14.26□□□□□ -0.13
C9orf47-203ENST00000375851 NCAM1P13591 858 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 LSP1P33241 339 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 COL9A3Q14050 684 aaPredicted RBP14.26□□□□□ -0.13
C9orf47-203ENST00000375851 FKBP1CQ5VVH2 108 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 PTF1AQ7RTS3 328 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 PLEKHH3Q7Z736 793 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 SLC5A5Q92911 643 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 SLC35C1Q96A29 364 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 KLF6Q99612 283 aaPredicted RBP14.26□□□□□ -0.13
C9orf47-203ENST00000375851 ECT2Q9H8V3 914 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 PPCSQ9HAB8 311 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 STOML1Q9UBI4 398 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 FAM198AQ9UFP1 575 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 TMEM120BA0PK00 339 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 TGFB3P10600 412 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 CYP2C8P10632 490 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 OR1G1P47890 313 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 ACOT1Q86TX2 421 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 SLC47A2Q86VL8 602 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 DNAAF5Q86Y56 855 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 ATP8B4Q8TF62 1192 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 MTMR9Q96QG7 549 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 UPP2O95045 317 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 VTNP04004 478 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 STAG3L1P0CL83 205 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 EPHX2P34913 555 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 HSD17B3P37058 310 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 IRAK1P51617 712 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 MYL6P60660 151 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 FKBP1AP62942 108 aaKnown RBP14.26□□□□□ -0.13
C9orf47-203ENST00000375851 ZNF512Q96ME7 567 aaPredicted RBP14.26□□□□□ -0.13
C9orf47-203ENST00000375851 FAM161BQ96MY7 647 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 EGFL8Q99944 293 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 PRG3Q9Y2Y8 225 aaPredicted RBP14.26□□□□□ -0.13
C9orf47-203ENST00000375851 KBTBD13C9JR72 458 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 PLSCR1O15162 318 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 SPAG6O75602 509 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 VDRP11473 427 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 CD302Q8IX05 232 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 DCP1BQ8IZD4 617 aaKnown RBP14.26□□□□□ -0.13
C9orf47-203ENST00000375851 CERS5Q8N5B7 392 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 PPHLN1Q8NEY8 458 aaKnown RBP14.26□□□□□ -0.13
C9orf47-203ENST00000375851 MTMR8Q96EF0 704 aa14.26□□□□□ -0.13
C9orf47-203ENST00000375851 GLT1D1Q96MS3 346 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms